Contig 008780:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF020D18-                                                                    TT
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consensus                                                                       TT
 
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rJMFF020D18-          TTTCTTGATTTGCATTTCAATAGCTCAAAGGAAAATACAGTGACTCACAGAAATTGATCT
                      ____________________________________________________________
consensus             TTTCTTGATTTGCATTTCAATAGCTCAAAGGAAAATACAGTGACTCACAGAAATTGATCT
 
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rJMFF020D18-          CCACTACAGAATAAGTCATACTGCATTAGAACCAAAATAAATAATACAGAGTACTGGAAG
                      ____________________________________________________________
consensus             CCACTACAGAATAAGTCATACTGCATTAGAACCAAAATAAATAATACAGAGTACTGGAAG
 
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rJMFF020D18-          ACTATATGGAACATATATGGGATCAGGGGAAGGTGAAGCAAAGTTTGATCAAGGAAGAGG
                      ____________________________________________________________
consensus             ACTATATGGAACATATATGGGATCAGGGGAAGGTGAAGCAAAGTTTGATCAAGGAAGAGG
 
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rJMFF020D18-          GCACTTAATCAAGAACCTTGGTCTACGAAATGTTGAGAGAGCAGCTAAGGCAGCAATATT
                      ____________________________________________________________
consensus             GCACTTAATCAAGAACCTTGGTCTACGAAATGTTGAGAGAGCAGCTAAGGCAGCAATATT
 
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rJMFF020D18-          GGCAGCATCAACAAGATTCCCTCCATTGTCTAGAATGTGAAGATCAATACGAATAGCCCA
JMFF020D18+                                                   AGATCAATACGAATAGCCCA
                      ____________________________________________________________
consensus             GGCAGCATCAACAAGATTCCCTCCATTGTCTAGAATGTGAAGATCAATACGAATAGCCCA
 
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rJMFF020D18-          AACCCATTTCCCAGCAACAACACAGAGAGACTCAGTATCTACAGCTCGGCTTTCCCTCAA
JMFF020D18+           AACCCATTTCCCAGCAACAACACAGAGAGACTCAGTATCTACAGCTCGGCTTTCCCTCAA
                      ____________________________________________________________
consensus             AACCCATTTCCCAGCAACAACACAGAGAGACTCAGTATCTACAGCTCGGCTTTCCCTCAA
 
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rJMFF020D18-          TCCACGATCAATTATGCGTCCCAACTCCACAGCGGACTCTCCAGGACGGCCTGCCTCAAA
JMFF020D18+           TCCACGATCAATTATGCGTCCCAACTCCACAGCGGACTCTCCAGGACGGCCTGCCTCAAA
                      ____________________________________________________________
consensus             TCCACGATCAATTATGCGTCCCAACTCCACAGCGGACTCTCCAGGACGGCCTGCCTCAAA
 
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rJMFF020D18-          TGAAGGATCAGCCATTGGAGAAAACTCAGTATAGATTGCAAGGGTTCCCTCATTAGGTCT
JMFF020D18+           TGAAGGATCAGCCATTGGAGAAAACTCAGTATAGATTGCAAGGGTTCCCTCATTAGGTCT
                      ____________________________________________________________
consensus             TGAAGGATCAGCCATTGGAGAAAACTCAGTATAGATTGCAAGGGTTCCCTCATTAGGTCT
 
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rJMFF020D18-          TTCACGATAAGGTTGCACTAATTGAGAAGTAACAACTCCCATCACATGTGTGTGCCCCAG
JMFF020D18+           TTCACGATAAGGTTGCACTAATTGAGAAGTAACAACTCCCATCACATGTGTGTGCCCCAG
                      ____________________________________________________________
consensus             TTCACGATAAGGTTGCACTAATTGAGAAGTAACAACTCCCATCACATGTGTGTGCCCCAG
 
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rJMFF020D18-          CTGCACCTCTGATGAGCCATCATCTCTGCCAAACTTGATAGTGAGCCGTCTATAATCGAA
JMFF020D18+           CTGCACCTCTGATGAGCCATCATCTCTGCCAAACTTGATAGTGAGCCGTCTATAATCGAA
                      ____________________________________________________________
consensus             CTGCACCTCTGATGAGCCATCATCTCTGCCAAACTTGATAGTGAGCCGTCTATAATCGAA
 
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rJMFF020D18-          AGGGCGCCGGCCGTCGACTCTGAGGTCGGAAACCAAAGCGTTTTCGATGAATTGCTTGTC
JMFF020D18+           AGGGCGCCGGCCGTCGACTCTGAGGTCGGAAACCAAAGCGTTTTCGATGAATTGCTTGTC
                      ____________________________________________________________
consensus             AGGGCGCCGGCCGTCGACTCTGAGGTCGGAAACCAAAGCGTTTTCGATGAATTGCTTGTC
 
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rJMFF020D18-          GTTCACAGTCAACCTCCAGGAATTAGCCAATCTCTGCTCCATTTTACATATATCTAATCA
JMFF020D18+           GTTCACAGTCAACCTCCAGGAATTAGCCAATCTCTGCTCCATTTTACATATATCTAATCA
                      ____________________________________________________________
consensus             GTTCACAGTCAACCTCCAGGAATTAGCCAATCTCTGCTCCATTTTACATATATCTAATCA
 
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rJMFF020D18-          AAAACAATGGTGAACCATGAGAACTCGATTACGAACGAAGCACTCAAAAGTTCAAAGAAT
JMFF020D18+           AAAACAATGGTGAACCATGAGAACTCGATTACGAACGAAGCACTCAAAAGTTCAAAGAAT
                      ____________________________________________________________
consensus             AAAACAATGGTGAACCATGAGAACTCGATTACGAACGAAGCACTCAAAAGTTCAAAGAAT
 
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rJMFF020D18-          TCCGAG                                                      
JMFF020D18+           TCCGAGCAGTAAGGCGGAGCCCGTCGGGGAGGAGAAAGCGTGCTAGGGTTTATGAATTAT
                      ____________________________________________________________
consensus             TCCGAGCAGTAAGGCGGAGCCCGTCGGGGAGGAGAAAGCGTGCTAGGGTTTATGAATTAT