Contig 008778:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020A01Sequence487008778 (3)emb|CDP03114.1|1e-13unnamed protein product [Coffea canephora]644011092 (3)emb|CDP03114.1|3e-44unnamed protein product [Coffea canephora]
JMFF029K19Sequence362008778 (3)emb|CDP03114.1|4e-13unnamed protein product [Coffea canephora]711011092 (3)emb|CDP03114.1|1e-38unnamed protein product [Coffea canephora]
JMFF043B07Sequence600008778 (3)emb|CDP03114.1|2e-13unnamed protein product [Coffea canephora]640011092 (3)emb|CDP03114.1|7e-39unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF043B07+           CGCCGGCGCACAATGTTGCAGAGGAGGCGGCGGCGGCCGTCTTTTCCCTCTCCGAACTNT
                      ____________________________________________________________
consensus             CGCCGGCGCACAATGTTGCAGAGGAGGCGGCGGCGGCCGTCTTTTCCCTCTCCGAACTNT
 
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JMFF043B07+           TCGCCGTGAAAATCGACGATTTTGGAGTAGACCTAGACGCCGCCGACGACTCCGTCTCCG
JMFF029K19+                                                                    CCG
JMFF020A01+                                                                    CCG
                      ____________________________________________________________
consensus             TCGCCGTGAAAATCGACGATTTTGGAGTAGACCTAGACGCCGCCGACGACTCCGTCTCCG
 
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JMFF043B07+           ACGAAGAAAACAAGCTGGAATCCGTGGACGAGCTGGAGTCGGAGTTGAAGTGTCTCCTCG
JMFF029K19+           ACGAAGAAAACAAGCTGGAATCCGTGGACGAGCTGGAGTCGGAGTTGAAGTGTCTCCTCG
JMFF020A01+           ACGAAGAAAACAAGCTGGAATCCGTGGACGAGCTGGAGTCGGAGTTGAAGTGTCTCCTCG
                      ____________________________________________________________
consensus             ACGAAGAAAACAAGCTGGAATCCGTGGACGAGCTGGAGTCGGAGTTGAAGTGTCTCCTCG
 
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JMFF043B07+           TGTAGCTCTCCATCCATTTCTCCAACATGATTGCTCGTCGGAGACTTGTGATTTCCTCTT
JMFF029K19+           TGTAGCTCCCCACCCATTTCTCCAACATGATTGCTCGTCGGAGACTTGTGATTTCCTCTT
JMFF020A01+           TGTAGCTCTCCATCCATTTCTCCAACATGATTGCTCGTCGGAGACTTGTGATTTCCTCTT
                      ____________________________________________________________
consensus             TGTAGCTCTCCATCCATTTCTCCAACATGATTGCTCGTCGGAGACTTGTGATTTCCTCTT
 
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JMFF043B07+           CAACTTCAACGCCGCCGCCATTGTTGTTCCTTCTGTACGCCGCGGCGGCGGCGAACGACG
JMFF029K19+           CAACTTCAACGCCGCCGCCATTGTTGTTCCTTCTGTACGCCGCGGCGGCGGCGAACGACG
JMFF020A01+           CAACTTCAACGCCGCCGCCATTGTTGTTCCTTCTGTACGCCGCGGCGGCGGCGAACGACG
                      ____________________________________________________________
consensus             CAACTTCAACGCCGCCGCCATTGTTGTTCCTTCTGTACGCCGCGGCGGCGGCGAACGACG
 
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JMFF043B07+           ACGTTTCTTTCTCTTCTACCGACTCGTCAATGGAATGGTAAATGGCTTCCAGGAGGGAGG
JMFF029K19+           ACGTTTCTTTCTCTTCTACCGACTCGTCAATGGAATGGTAAATGGCTTCCAGGAGGGAGG
JMFF020A01+           ACGTTTCTTTCTCTTCTACCGACTCGTCAATGGAATGGTAAATGGCTTCCAGGAGGGAGG
                      ____________________________________________________________
consensus             ACGTTTCTTTCTCTTCTACCGACTCGTCAATGGAATGGTAAATGGCTTCCAGGAGGGAGG
 
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JMFF043B07+           AAGAGAAGGACGGAGTTTTCCTCCTCCGCTGACTTCTTTCGTTCCGCCATGGCTTTTCCA
JMFF029K19+           AAGAGAAGGACGGAGTTTTCCTCCTCCGCTGACTTCTTTCGTTCCGCCATGGCTTTTCCA
JMFF020A01+           AAGAGAAGGACGGAGTTTTCCTCCTCCGCTGACTTCTTTCGTTCCGCCATGGCTTTTCCA
                      ____________________________________________________________
consensus             AAGAGAAGGACGGAGTTTTCCTCCTCCGCTGACTTCTTTCGTTCCGCCATGGCTTTTCCA
 
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JMFF043B07+           TATCAGAGATAGATTCAGAGTAGAGTTTCAGAAGAAAGTGGACATGGAAAATAAATAATG
JMFF029K19+           TATCAGAGATAGATTCAGAGTAGAGTTTCAGAAGAAAGTGGACATGGAAAATAAATAAT 
JMFF020A01+           TATCAGAGATAGATTCAGAGTAGAGTTTCAGAAGAAAGTGGACATGGAAAATAAATAATG
                      ____________________________________________________________
consensus             TATCAGAGATAGATTCAGAGTAGAGTTTCAGAAGAAAGTGGACATGGAAAATAAATAATG
 
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JMFF043B07+           ATCAGATACTGTAGTGGAAGGTGGCTATATAGAGAAGTTGGTGGAAAAGCCAAATGGCAC
JMFF020A01+           ATCAGATACTGTAGTGGAAGGTGGCTATATAGAGAAGTTGGTGGAAAAGCCAAATGGCAC
                      ____________________________________________________________
consensus             ATCAGATACTGTAGTGGAAGGTGGCTATATAGAGAAGTTGGTGGAAAAGCCAAATGGCAC
 
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JMFF043B07+           GGCTTGGATTTTGGGAGAGAGAGAGAGAGAGAAGGAAACTTCCGCAGGGGAATAGAGTAT
JMFF020A01+           GGCTTGGATTTTGGGAGAGAGAGAGAGAGAGAAGGAAACTTCCGCAGGGGAATAGAGTAT
                      ____________________________________________________________
consensus             GGCTTGGATTTTGGGAGAGAGAGAGAGAGAGAAGGAAACTTCCGCAGGGGAATAGAGTAT