| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019O10 | Sequence | 506 | 008777 (6) | ref|XP_009607918.1| | 257 | PREDICTED: uncharacterized protein LOC104102030 [Nicotiana tomentosiformis] | 735 | 008777 (6) | ref|XP_006344688.1| | 282 | PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum] |
| JMFS040A09 | Sequence | 628 | 008777 (6) | ref|XP_006344688.1| | 341 | PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum] | |||||
| JMSF019E15 | Sequence | 552 | 008777 (6) | ref|XP_006344688.1| | 304 | PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum] | |||||
| JMSF021G23 | Sequence | 685 | 008777 (6) | ref|XP_006344688.1| | 352 | PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum] | 738 | 008777 (6) | ref|XP_006344688.1| | 326 | PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF019O10- TCTTTATATATATGAG
____________________________________________________________
consensus TCTTTATATATATGAG
. : . : . : . : . : . :
rJMFF019O10- TGTGTGCAGTTAGAGACGAAAACACAAAACAAGGCAGTGGGGATAGCAGAAACTTTAGAA
rJMSF021G23- GAGACGAAAACACAAAACAAGGCAGTGGGGATAGCAGAAACTTTAGAA
____________________________________________________________
consensus TGTGTGCAGTTAGAGACGAAAACACAAAACAAGGCAGTGGGGATAGCAGAAACTTTAGAA
. : . : . : . : . : . :
rJMFF019O10- ACTACAACTAGACCTGTGAACACACGTTAATATAACAATCCACTATTTTTCTTCCACTTG
rJMSF021G23- ACTACAACTAGACCTGTGAACACACGTTAATATAACAATCCACTATTTTTCTTCCACTTG
____________________________________________________________
consensus ACTACAACTAGACCTGTGAACACACGTTAATATAACAATCCACTATTTTTCTTCCACTTG
. : . : . : . : . : . :
rJMFF019O10- CCTTCTTGCTTCCCTGACCCGGGGAGAACTTGAGTTCAATTTTTTTGGCAGCACGTTGTA
rJMSF021G23- CCTTCTTGCTTCCCTGACCCGGGGAGAACTTGAGTTCAA-TTTTTTGGCAGCACGTTGTA
____________________________________________________________
consensus CCTTCTTGCTTCCCTGACCCGGGGAGAACTTGAGTTCAATTTTTTTGGCAGCACGTTGTA
. : . : . : . : . : . :
rJMFF019O10- TAGCTGCCTGTTTGTAGCGTTGTCTGCGGTTTCTGCGTTGGCTGACAAACAGAAGTCCTG
rJMSF021G23- TAGCTGCCTGTTTGTAGCGTTGTCTGCGGTTTCTGCGTTGGCTGACAAACAGAAGTCCTG
____________________________________________________________
consensus TAGCTGCCTGTTTGTAGCGTTGTCTGCGGTTTCTGCGTTGGCTGACAAACAGAAGTCCTG
. : . : . : . : . : . :
rJMFF019O10- CAGTGAGAACCATTCCACCTATTGCCCAAGACACTCTTTCACTGAAAAGCATGTCCTCCA
rJMSF021G23- CAGTGAGAACCATTCCACCTATTGCCCAAGACACTCTTTCACTGAAAAGCATGTCCTCCA
____________________________________________________________
consensus CAGTGAGAACCATTCCACCTATTGCCCAAGACACTCTTTCACTGAAAAGCATGTCCTCCA
. : . : . : . : . : . :
rJMFF019O10- CCCAGTGCTTGAAATCTTCTAGCACACTTGAACTCCGAGCAGTTTGAGCAAACTTGGAGT
rJMSF021G23- CCCAGTGCTTGAAATCTTCTAGCACACTTGAACTCCGAGCAGTTTGAGCAAACTTGGAGT
JMSF021G23+ AGTGCTTGAAATCTTCTAGCACACTTGAACTCCGAGCAGTTTGAGCAAACTTGGAGT
____________________________________________________________
consensus CCCAGTGCTTGAAATCTTCTAGCACACTTGAACTCCGAGCAGTTTGAGCAAACTTGGAGT
. : . : . : . : . : . :
rJMFF019O10- GTTTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
rJMSF021G23- GTTTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
JMFS040A09+ TTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
JMSF021G23+ GTTTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
____________________________________________________________
consensus GTTTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
. : . : . : . : . : . :
rJMFF019O10- AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
rJMSF021G23- AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
JMFS040A09+ AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
JMSF021G23+ AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
JMSF019E15+ GGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
____________________________________________________________
consensus AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
. : . : . : . : . : . :
rJMFF019O10- AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
rJMSF021G23- AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
JMFS040A09+ AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
JMSF021G23+ AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
JMSF019E15+ AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
JMFF019O10+ CCTACCACAAACAAAGTCATTTACCC
____________________________________________________________
consensus AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
. : . : . : . : . : . :
rJMFF019O10- CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
rJMSF021G23- CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
JMFS040A09+ CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
JMSF021G23+ CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
JMSF019E15+ CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
JMFF019O10+ CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
____________________________________________________________
consensus CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
. : . : . : . : . : . :
rJMFF019O10- GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
rJMSF021G23- GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
JMFS040A09+ GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
JMSF021G23+ GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
JMSF019E15+ GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
JMFF019O10+ GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
____________________________________________________________
consensus GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
. : . : . : . : . : . :
rJMFF019O10- GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCT
rJMSF021G23- GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
JMFS040A09+ GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
JMSF021G23+ GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
JMSF019E15+ GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
JMFF019O10+ GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
____________________________________________________________
consensus GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
. : . : . : . : . : . :
rJMSF021G23- CCCCTGTAGAAGCCAACCTCCTAATGGACAG
JMFS040A09+ CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
JMSF021G23+ CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
JMSF019E15+ CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
JMFF019O10+ CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
____________________________________________________________
consensus CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
. : . : . : . : . : . :
JMFS040A09+ AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
JMSF021G23+ AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
JMSF019E15+ AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
JMFF019O10+ AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
____________________________________________________________
consensus AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
. : . : . : . : . : . :
JMFS040A09+ TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
JMSF021G23+ TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
JMSF019E15+ TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
JMFF019O10+ TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
____________________________________________________________
consensus TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
. : . : . : . : . : . :
JMFS040A09+ CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
JMSF021G23+ CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
JMSF019E15+ CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
JMFF019O10+ CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
____________________________________________________________
consensus CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
. : . : . : . : . : . :
JMFS040A09+ AGGAATCAAATC
JMSF021G23+ AGGAATCAAATCTCATCCTTGATCCTTC
JMSF019E15+ AGGAATCAAATCTCATCCTTGATCCTTC
JMFF019O10+ AGGAATCAAATCTCATCCTTGATCCTTCAATGCCGTGCGGTGCAGTGCGGGGCATTAAGG
____________________________________________________________
consensus AGGAATCAAATCTCATCCTTGATCCTTCAATGCCGTGCGGTGCAGTGCGGGGCATTAAGG