Contig 008776:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011D20Sequence440008776 (3)ref|XP_004252665.1|6e-27PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]752001057 (3)ref|XP_007036183.1|1e-158Kinase superfamily protein isoform 1 [Theobroma cacao] gb|EOY20684.1| Kinase sup
JMFF019G24Sequence524008776 (3)ref|XP_004252665.1|1e-28PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]658001057 (3)ref|XP_003527023.1|1e-138PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max]
JMFF035I21Sequence554008776 (3)ref|XP_004252665.1|1e-33PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]564001057 (3)ref|XP_010251291.1|5e-120PREDICTED: serine/threonine-protein kinase HT1-like [Nelumbo nucifera]

Alignment

This contig is upended


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JMFF035I21+                                                      TAAGAGAAGCTATTTCA
                      ____________________________________________________________
consensus                                                        TAAGAGAAGCTATTTCA
 
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JMFF035I21+           GCCTCCAACCTTTGGCCCTCTTCCCCCCAATCAAGAAGTTTCACTGCCACATCTAGGCCA
JMFF011D20+                                   CCCCAATCAAGAAGTTTCACTGCCACATCTAGGCCA
JMFF019G24+                           CCTCTTCCCCCCAATCAAGAAGTTTCACTGCCACATCTAGGCCA
                      ____________________________________________________________
consensus             GCCTCCAACCTTTGGCCCTCTTCCCCCCAATCAAGAAGTTTCACTGCCACATCTAGGCCA
 
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JMFF035I21+           TCGTAGATGCCACGATGAACGGTGCCGAAGGTGCCACGAGAAATGACGCTCTTGATGAGG
JMFF011D20+           TCGTAGATGCCACGATGAACGGTGCCGAAGGTGCCACGAGAAATGACGCTCTTGATGAGG
JMFF019G24+           TCGTAGATGCCACGATGAACGGTGCCGAAGGTGCCACGAGAAATGACGCTCTTGATGAGG
                      ____________________________________________________________
consensus             TCGTAGATGCCACGATGAACGGTGCCGAAGGTGCCACGAGAAATGACGCTCTTGATGAGG
 
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JMFF035I21+           AGCTTGGAAGGATCAATTTCCCAGTCGTGGCGAATGGGGATCTCCCTATCCCCATTGTGA
JMFF011D20+           AGCTTGGAAGGATCAATTTCCCAGTCGTGGCGAATGGGGATCTCCCTATCCCCATTGTGA
JMFF019G24+           AGCTTGGAAGGATCAATTTCCCAGTCGTGGCGAATGGGGATCTCCCTATCCCCATTGTGA
                      ____________________________________________________________
consensus             AGCTTGGAAGGATCAATTTCCCAGTCGTGGCGAATGGGGATCTCCCTATCCCCATTGTGA
 
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JMFF035I21+           TGAAGCCGGGGATGATGATCTTCTTCTTCTTCTTCTCCGCTCTTCTTCTTCTTCTCAATA
JMFF011D20+           TGAAGCCGGGGATGATGATCTTCTTCTTCTTCTTCTCCGCTCTTCTTCTTCTTCTCAATA
JMFF019G24+           TGAAGCCGGGGATGATGATCTTCTTCTTCTTCTTCTCCGCTCTTCTTCTTCTTCTCAATA
                      ____________________________________________________________
consensus             TGAAGCCGGGGATGATGATCTTCTTCTTCTTCTTCTCCGCTCTTCTTCTTCTTCTCAATA
 
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JMFF035I21+           GTCAATGCTCGGTTTAGATGCCTCTGAAGCTGCTCGTCCAGACTCTTCAGATCTACTCTA
JMFF011D20+           GTCAATGCTCGGTTTAGATGCCTCTGAAGCTGCTCGTCCAGACTCTTCAGATCTACTCTA
JMFF019G24+           GTCAATGCTCGGTTTAGATGCCTCTGAAGCTGCTCGTCCAGACTCTTCAGATCTACTCTA
                      ____________________________________________________________
consensus             GTCAATGCTCGGTTTAGATGCCTCTGAAGCTGCTCGTCCAGACTCTTCAGATCTACTCTA
 
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JMFF035I21+           TCCGCCCTCACAAACCCTCCATCCCCACCTCCCTCGTCGTCCCCCGCCTCCTTCATCTGC
JMFF011D20+           TCCGCCCTCACAAACCCTCCATCCCCACCTCCCTCGTCGTCCCCCGCCTCCTTCATCTGC
JMFF019G24+           TCCGCCCTCACAAACCCTCCATCCCCACCTCCCTCGTCGTCCCCCGCCTCCTTCATCTGC
                      ____________________________________________________________
consensus             TCCGCCCTCACAAACCCTCCATCCCCACCTCCCTCGTCGTCCCCCGCCTCCTTCATCTGC
 
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JMFF035I21+           CTCCCCTTTTCACTGTTCTGATTTCACAACTCGATCATTGATTCCCCTTCCCTCCCTTTT
JMFF011D20+           CTCCCCTTTTCACTGTTCTGATTTCACAACTCGATCATTGATTCCCCTTCCCTCCCTTTT
JMFF019G24+           CTCCCCTTTTCACTGTTCTGATTTCACAACTCGATCATTGATTCCCCTTCCCTCCCTTTT
                      ____________________________________________________________
consensus             CTCCCCTTTTCACTGTTCTGATTTCACAACTCGATCATTGATTCCCCTTCCCTCCCTTTT
 
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JMFF035I21+           CTTCTTCTTCTTCTTCTCTCTCTCTCCAGGTGACGGAATGAGAGACGCAAACAACTGCCA
JMFF011D20+           CTTCTTCTTCTTCTTCTCTCTCTCTCCAGGTGACGGAATGAGAG                
JMFF019G24+           CTTCTTCTTCTTCTTCTCTCTCTCTCCAGGTGACGGAATGAGAGACGCAAACAACTGCCA
                      ____________________________________________________________
consensus             CTTCTTCTTCTTCTTCTCTCTCTCTCCAGGTGACGGAATGAGAGACGCAAACAACTGCCA
 
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JMFF035I21+           CTGCTTGAGTTTGTATCGGCGATGTGATTGTATGCACTTATTTACCGGCGCCGCTAT   
JMFF019G24+           CTGCTTGAGTTTGTATCGGCGATGTGATTGTATGCACTTATTTACCGGCGCCGCTATGTT
                      ____________________________________________________________
consensus             CTGCTTGAGTTTGTATCGGCGATGTGATTGTATGCACTTATTTACCGGCGCCGCTATGTT