clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF014L08 | Sequence | 522 | 008775 (5) | sp|P31593.1|GSA_TOBAC | 3e-70 | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GS | 618 | 009766 (6) | ref|XP_004136907.1| | 3e-97 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cucumi |
JMFF016O17 | Sequence | 525 | 008775 (5) | sp|P31593.1|GSA_TOBAC | 3e-70 | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GS | 686 | 009766 (6) | ref|XP_004136907.1| | 7e-97 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cucumi |
JMFF019E17 | Sequence | 595 | 008775 (5) | sp|P31593.1|GSA_TOBAC | 2e-63 | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GS | 718 | 009766 (6) | ref|XP_004136907.1| | 6e-107 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cucumi |
JMFF041K12 | Sequence | 632 | 008775 (5) | sp|P31593.1|GSA_TOBAC | 1e-104 | RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GS | 624 | 009766 (6) | ref|XP_004297515.1| | 3e-87 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Frag |
JMSF031O23 | Sequence | 649 | 008775 (5) | ref|XP_009789880.1| | 8e-102 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic [Nicotiana s | 650 | 009766 (6) | ref|XP_004136907.1| | 4e-104 | PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cucumi |
This contig is upended
. : . : . : . : . : . :
JMFF041K12+ AAAAGGATCTGCATGCCCATGGTAGCAACC
JMSF031O23+ TGCATGCCCATGGTAGCAACC
____________________________________________________________
consensus AAAAGGATCTGCATGCCCATGGTAGCAACC
. : . : . : . : . : . :
JMFF041K12+ CTCGAATTTGATTAACTTTTCTCGTCCAGTGAAAGCTCGAGCCAATCGCAGTACACCCAT
JMSF031O23+ CTCGAATTTGATTAACTTTTCTCGTCCAGTGAAAGCTCGAGCCAATCGCAGTACACCCAT
____________________________________________________________
consensus CTCGAATTTGATTAACTTTTCTCGTCCAGTGAAAGCTCGAGCCAATCGCAGTACACCCAT
. : . : . : . : . : . :
JMFF041K12+ GCAAGCCTCTGTGCCCGAGTTAACAAATCGAACCATTTCTATACATGGAACGGCTTCAAT
JMFF014L08+ CTATACATGGAACGGCTTCAAT
JMFF016O17+ CTATACATGGAACGGCTTCAAT
JMSF031O23+ GCAAGCCTCTGTGCCCGAGTTAACAAATCGAACCATTTCTATACATGGAACGGCTTCAAT
____________________________________________________________
consensus GCAAGCCTCTGTGCCCGAGTTAACAAATCGAACCATTTCTATACATGGAACGGCTTCAAT
. : . : . : . : . : . :
JMFF041K12+ GACCAACTCGGCCAAGGTGTTTTCGAGGAGACAGGGAGCACCAAAGCTCGTTCCCTTCTT
JMFF014L08+ GACCAACTCGGCCAAGGTGTTTTCGAGGAGACAGGGAGCACCAAAGCTTGTTCCCTTCTT
JMFF016O17+ GACCAACTCGGCCAAGGTGTTTTCGAGGAGACAGGGAGCACCAAAGCTTGTTCCCTTCTT
JMSF031O23+ GACCAACTCGGCCAAGGTGTTTTCGAGGAGACAGGGAGCACCAAAGCTTGTTCCCTTCTT
JMFF019E17+ CCAAGGTGTTTTCGAGGAGACAGGGAGCACCAAAGCTTGTTCCCTTCTT
____________________________________________________________
consensus GACCAACTCGGCCAAGGTGTTTTCGAGGAGACAGGGAGCACCAAAGCTTGTTCCCTTCTT
. : . : . : . : . : . :
JMFF041K12+ CATTGTTTCAGCCAATGCTGCCAACACCTCATCATCTGCATGGCCGATGATAGCTGGGCC
JMFF014L08+ CATTGTTTCAGCCAATGCTGCCAACACCTCATCATCTGCATGGCCGATGATAGCTGGGCC
JMFF016O17+ CATTGTTTCAGCCAATGCTGCCAACACCTCATCATCTGCATGGCCGATGATAGCTGGGCC
JMSF031O23+ CATTGTTTCAGCCAATGCTGCCAACACCTCATCATCTGCATGGCCGATGATAGCTGGGCC
JMFF019E17+ CATTGTTTCAGCCAATGCTGCCAACACCTCATCATCTGCATGGCCGATGATAGCTGGGCC
____________________________________________________________
consensus CATTGTTTCAGCCAATGCTGCCAACACCTCATCATCTGCATGGCCGATGATAGCTGGGCC
. : . : . : . : . : . :
JMFF041K12+ CCAGGAACCAACGTAGTCAATGTACTTATTTCCATCTATATCCCACATATACGCGCCCTT
JMFF014L08+ CCAGGAACCAACGTAGTCAATGTACTTATTTCCATCTATATCCCACATATACGCGCCCTT
JMFF016O17+ CCAGGAACCAACGTAGTCAATGTACTTATTTCCATCTATATCCCACATATACGCGCCCTT
JMSF031O23+ CCAGGAACCAACGTAGTCAATGTACTTATTTCCATCTATATCCCACATATACGCGCCCTT
JMFF019E17+ CCAGGAACCAACGTAGTCAATGTACTTATTTCCATCTATATCCCACATATACGCGCCCTT
____________________________________________________________
consensus CCAGGAACCAACGTAGTCAATGTACTTATTTCCATCTATATCCCACATATACGCGCCCTT
. : . : . : . : . : . :
JMFF041K12+ CACAGAATCCATCACAATAGGCTGACCACCAACAGATTTGAAAGCACGTACAGGCGAATT
JMFF014L08+ CACAGAATCCATCACAATAGGCTGACCACCAACAGATTTGAAAGCACGTACAGGCGAATT
JMFF016O17+ CACAGAATCCATCACAATAGGCTGACCACCAACAGATTTGAAAGCACGTACAGGCGAATT
JMSF031O23+ CACAGAATCCATCACAATAGGCTGACCACCAACAGATTTGAAAGCACGTACAGGCGAATT
JMFF019E17+ CACAGAATCCATCACAATAGGCTGACCACCAACAGATTTGAAAGCACGTACAGGCGAATT
____________________________________________________________
consensus CACAGAATCCATCACAATAGGCTGACCACCAACAGATTTGAAAGCACGTACAGGCGAATT
. : . : . : . : . : . :
JMFF041K12+ CACACCTCCAGGCATCAGCTCCTTCGCTTTATTGAAAGCTTCTTCGGATTTCTGGAGGGT
JMFF014L08+ CACACCTCCAGGCATCAGCTCCTTCGCTTTATTGAAAGCTTCTTCGGATTTCTGGAGGGT
JMFF016O17+ CACACCTCCAGGCATCAGCTCCTTCGCTTTATTGAAAGCTTCTTCGGATTTCTGGAGGGT
JMSF031O23+ CACACCTCCAGGCATCAGCTCCTTCGCTTTATTGAAAGCTTCTTCGGATTTCTGGAGGGT
JMFF019E17+ CACACCTCCAGGCATCAGCTCCTTCGCTTTATTGAAAGCTTCTTCGGATTCCTGGAGGGT
____________________________________________________________
consensus CACACCTCCAGGCATCAGCTCCTTCGCTTTATTGAAAGCTTCTTCGGATTTCTGGAGGGT
. : . : . : . : . : . :
JMFF041K12+ AAAAGTCTTCTGCTTCTCGTCAACTGAAGACACCGCCATCCTGATGGTGGTAGACGGAGA
JMFF014L08+ AAAAGTCTTCTGCTTCTCGTCAACTGAAGACACCGCCATCCTGATGGTGGTAGACGGAGA
JMFF016O17+ AAAAGTCTTCTGCTTCTCGTCAACTGAAGACACCGCCATCCTGATGGTGGTAGACGGAGA
JMSF031O23+ AAAAGTCTTCTGCTTCTCGTCAACTGAAGACACCGCCATCCTGATGGTGGTAGACGGAGA
JMFF019E17+ AAAAGTCTTCTGCTTCTCGTCAACTGAAGACACCGCCATCCTGATGGTGGTAGACGGAGA
____________________________________________________________
consensus AAAAGTCTTCTGCTTCTCGTCAACTGAAGACACCGCCATCCTGATGGTGGTAGACGGAGA
. : . : . : . : . : . :
JMFF041K12+ AGAGGATGAAATCCAGCGGCGGGGAGAGGGTGGCGCCACCAATGTTGATACGCGGTTGTG
JMFF014L08+ AGAGGAGGAAATCCAGCGGCGGGGAGAGGGTGGCGCCACCAATGTTGATACGCGGTTGTG
JMFF016O17+ AGAGGAGGAAATCCAGCGGCGGGGAGAGGGTGGCGCCACCAATGTTGATACGCGGTTGTG
JMSF031O23+ AGAGGAGGAAATCCAGCGGCGGGGAGAGGGTGGCGCCACCAATGTTGATACGCGGTTGTG
JMFF019E17+ AGAGGAGGAAATCCAGCGGCGGGGAGAGGGTGGCGCCACCAATGTTGATACGCGGTTGTG
____________________________________________________________
consensus AGAGGAGGAAATCCAGCGGCGGGGAGAGGGTGGCGCCACCAATGTTGATACGCGGTTGTG
. : . : . : . : . : . :
JMFF041K12+ GGTCAATTTCGATGGCCATGAATAGGATAACCCTAGTCCAGTTGAAGCAGCCATGGCTCC
JMFF014L08+ GGTCAATTTCGATGGCCATGAATAGGATAACCCTAGTCCAGTTGAAGCAGCCATGGCTCC
JMFF016O17+ GGTCAATTTCGATGGCCATGAATAGGATAACCCTAGTCCAGTTGAAGCAGCCATGGCTCC
JMSF031O23+ GGTCAATTTCGATGGCCATGAATAGGATAACCCTAGTCCAGTTGAAGCAGCCATGGCTCC
JMFF019E17+ GGTCAATTTCGATGGCCATGAATAGGATAACCCTAGTCCAGTTGAAGCAGCCATGGCTCC
____________________________________________________________
consensus GGTCAATTTCGATGGCCATGAATAGGATAACCCTAGTCCAGTTGAAGCAGCCATGGCTCC
. : . : . : . : . : . :
JMFF014L08+ TCAGTGGTGGATTGACAAGT
JMFF016O17+ TCAGTGGTGGATTGACAAGT
JMSF031O23+ TCAGTGGTGGATTGACAAGT
JMFF019E17+ TCAGTGGTGGATTGACAAGTGCTGTAAAGAGCACTCCGAATTATCTCTGCCCTTTTGTAA
____________________________________________________________
consensus TCAGTGGTGGATTGACAAGTGCTGTAAAGAGCACTCCGAATTATCTCTGCCCTTTTGTAA
. : . : . : . : . : . :
JMFF019E17+ ACAATTTTGTTGTCTTGGAGTGGATTTGAAGATAAGAAAAGTAGATAGGGAGTGGACCAT
____________________________________________________________
consensus ACAATTTTGTTGTCTTGGAGTGGATTTGAAGATAAGAAAAGTAGATAGGGAGTGGACCAT