Contig 008772:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004F08Sequence534008772 (8)gb|KJB09427.1|1e-82hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth803002728 (8)ref|XP_007200983.1|8e-126hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti
JMFF017E16Sequence613008772 (8)gb|KJB09427.1|3e-101hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth791002728 (8)ref|XP_007200983.1|7e-110hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti
JMFF018I04Sequence628008772 (8)gb|KJB09427.1|2e-118hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth819002728 (8)ref|XP_002302734.1|9e-120Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat
JMFF024D21Sequence490008772 (8)gb|KJB09427.1|2e-80hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth819002728 (8)ref|XP_002302734.1|3e-119Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat
JMFF047C18Sequence382008772 (8)ref|XP_009778286.1|5e-52PREDICTED: fumarate hydratase 1, mitochondrial-like [Nicotiana sylvestris] ref|342002728 (8)ref|XP_004247395.1|9e-08PREDICTED: fumarate hydratase 1, mitochondrial [Solanum lycopersicum]
JMFF049J03Sequence622008772 (8)gb|KJB09427.1|2e-113hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth584002728 (8)ref|XP_002302734.1|3e-60Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat
JMSF016P04Sequence470008772 (8)gb|KJB09427.1|6e-82hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth747002728 (8)ref|XP_002302734.1|3e-129Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat
JMSF027O01Sequence635008772 (8)ref|XP_009622148.1|3e-133PREDICTED: fumarate hydratase 1, mitochondrial isoform X1 [Nicotiana tomentosif770002728 (8)ref|XP_007200983.1|2e-68hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF027O01+ TGAGT
                      ____________________________________________________________
consensus TGAGT
 
. : . : . : . : . : . :
JMSF027O01+ ACGCCCAATTTTGATGATGTCCTTGAATTCAACAGACTTTGAATGTAGTGAAGTATGCAG
                      ____________________________________________________________
consensus ACGCCCAATTTTGATGATGTCCTTGAATTCAACAGACTTTGAATGTAGTGAAGTATGCAG
 
. : . : . : . : . : . :
JMSF027O01+ TTGTTTCAGGTTTGGCAATAATCTCTTATTAATCTCCATTGCAGCTGCGATATGCATCAC
JMFF049J03+ GATATGCATCAC
JMFF018I04+ TCTTATTAATTTCCATTGCAGCTGCGATATGCATCAC
                      ____________________________________________________________
consensus TTGTTTCAGGTTTGGCAATAATCTCTTATTAATTTCCATTGCAGCTGCGATATGCATCAC
 
. : . : . : . : . : . :
JMSF027O01+ AGTAGGAAATGTGTCATTGGAAGATTGTGATCTGTTCACATGGTCATTTGGGTGTACAGC
JMFF049J03+ AGTAGGAAATGTATCATTGGAAGATTGTGATCTGTTCACATGGTCATTTGGGTGTACACC
JMFF018I04+ AGTAGGAAATGTATCATTGGAAGATTGTGATCTGTTCACATGGTCATTTGGGTGTACACC
JMFF017E16+ TCACATGGTCATTTGGGTGTACAGC
                      ____________________________________________________________
consensus AGTAGGAAATGTATCATTGGAAGATTGTGATCTGTTCACATGGTCATTTGGGTGTACAGC
 
. : . : . : . : . : . :
JMSF027O01+ TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
JMFF049J03+ TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
JMSF016P04+ ATTGGC
JMFF018I04+ TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
JMFF004F08+ CATTGGC
JMFF017E16+ TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
                      ____________________________________________________________
consensus TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
 
. : . : . : . : . : . :
JMSF027O01+ ATTCATGTTACTTTGTGTGCCACTACCAGTCTGCCAAACCACCAAAGGAAAATGGTCATT
JMFF049J03+ ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
JMSF016P04+ ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
JMFF024D21+ ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
JMFF018I04+ ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
JMFF004F08+ ATTCATGTTACTTTGTGTGCCACTACCAGTCTGCCAAACCACCAAAGGAAAATGGTCATT
JMFF017E16+ ATTCATGTTACTTTGTGTGCCACTACCAGTCTGCCAAACCACCAAAGGAAAATGGTCATT
                      ____________________________________________________________
consensus ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
 
. : . : . : . : . : . :
JMSF027O01+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCTTTCCCTATGGATGGCTC
JMFF049J03+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
JMSF016P04+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
JMFF024D21+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
JMFF047C18+ GGATGGCTC
JMFF018I04+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
JMFF004F08+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCTTTCCCTATGGATGGCTC
JMFF017E16+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCTTTCCCTATGGATGGCTC
                      ____________________________________________________________
consensus TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
 
. : . : . : . : . : . :
JMSF027O01+ AAGGCCATACTCCATATTCACCTTGGCTGCACACTTCTTAAGAACACCAAATGCACGTAT
JMFF049J03+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMSF016P04+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMFF024D21+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMFF047C18+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMFF018I04+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMFF004F08+ AAGGCCATACTCCATATTCACCTTGGCTGCACACTTCTTAAGAACACCAAATGCACGTAT
JMFF017E16+ AAGGCCATACTCCATATTCACCTTGGCTGCACACTTCTTAAGAACACCAAATGCACGTAT
                      ____________________________________________________________
consensus AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
 
. : . : . : . : . : . :
JMSF027O01+ AATAGGTTCAGGCATTCTTTCCCTGTCACCGCCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF049J03+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMSF016P04+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF024D21+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF047C18+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF018I04+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF004F08+ AATAGGTTCAGGCATTCTTTCCCTGTCACCGCCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF017E16+ AATAGGTTCAGGCATTCTTTCCCTGTCACCGCCAATTTCAAAGTTCTGCAATGATCTTTG
                      ____________________________________________________________
consensus AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
 
. : . : . : . : . : . :
JMSF027O01+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTATCTCTCTC
JMFF049J03+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMSF016P04+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMFF024D21+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMFF047C18+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMFF018I04+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMFF004F08+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTATCTCTCTC
JMFF017E16+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTATCTCTCTC
                      ____________________________________________________________
consensus AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
 
. : . : . : . : . : . :
JMSF027O01+ CTCCCGGAAGGAAGTAGAGAAATATCTCCAGCACGTCGTATAACGCAGCGACTCTGAAGA
JMFF049J03+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMSF016P04+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMFF024D21+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMFF047C18+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMFF018I04+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMFF004F08+ CTCCCGGAAGGAAGTAGAGAAATATCTCCAGCACGTCGTATAACGCAGCGACTCTGAAGA
JMFF017E16+ CTCCCGGAAGGAAGTAGAGAAATATCTCCAGCACGTCGTATAACGCAGCGACTCTGAAGA
                      ____________________________________________________________
consensus CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
 
. : . : . : . : . : . :
JMSF027O01+ AACGGACCTCGTCGATCCACCTGTTACTC
JMFF049J03+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMSF016P04+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMFF024D21+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMFF047C18+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMFF018I04+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMFF004F08+ AACGGACCTCGTCGATCCACCTGTTACTCGACGAGCAGCTATTAGCATAGCCATTTGTAT
JMFF017E16+ AACGGACCTCGTCGATCCACCTGTTACTCGACGAGCAGCTATTAGCATAGCCATTTGTAT
                      ____________________________________________________________
consensus GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
 
. : . : . : . : . : . :
JMFF049J03+ TTCCC
JMSF016P04+ TTCCCGTATACTCGAACCGCAACCAAAACCCGATAACAGCCGC
JMFF024D21+ TTCCC
JMFF047C18+ TTCCC
JMFF018I04+ TTCCCGTATACTCGAACCGCAACCAAAACCCGATAACAGCCGCACCGATCT
JMFF004F08+ TTCC------------CAACAACCAAAAGCCGATAACAGCCGCCGCTGCCGCCAATCTAG
JMFF017E16+ TTCC------------CAACAACCAAAAGCCGATAACAGCCGCCGCTGCCGCCAATCTAG
                      ____________________________________________________________
consensus TTCCCGTATACTCGAACCGCAACCAAAAGCCGATAACAGCCGCCGCTGCCGCCAATCTAG
 
. : . : . : . : . : . :
JMFF004F08+ AAGCACGATTGACCGATCAAACGGACTAGTATGCAAAGAAAAACTGGAAAAATTGAAA
JMFF017E16+ AAGCACGATTGACCGATCAAACGGACTAGTATGCAAAGAAAAACTGGAAAAATTGAAAAT
                      ____________________________________________________________
consensus AAGCACGATTGACCGATCAAACGGACTAGTATGCAAAGAAAAACTGGAAAAATTGAAAAT