| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004F08 | Sequence | 534 | 008772 (8) | gb|KJB09427.1| | 1e-82 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 803 | 002728 (8) | ref|XP_007200983.1| | 8e-126 | hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti |
| JMFF017E16 | Sequence | 613 | 008772 (8) | gb|KJB09427.1| | 3e-101 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 791 | 002728 (8) | ref|XP_007200983.1| | 7e-110 | hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti |
| JMFF018I04 | Sequence | 628 | 008772 (8) | gb|KJB09427.1| | 2e-118 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 819 | 002728 (8) | ref|XP_002302734.1| | 9e-120 | Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat |
| JMFF024D21 | Sequence | 490 | 008772 (8) | gb|KJB09427.1| | 2e-80 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 819 | 002728 (8) | ref|XP_002302734.1| | 3e-119 | Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat |
| JMFF047C18 | Sequence | 382 | 008772 (8) | ref|XP_009778286.1| | 5e-52 | PREDICTED: fumarate hydratase 1, mitochondrial-like [Nicotiana sylvestris] ref| | 342 | 002728 (8) | ref|XP_004247395.1| | 9e-08 | PREDICTED: fumarate hydratase 1, mitochondrial [Solanum lycopersicum] |
| JMFF049J03 | Sequence | 622 | 008772 (8) | gb|KJB09427.1| | 2e-113 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 584 | 002728 (8) | ref|XP_002302734.1| | 3e-60 | Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat |
| JMSF016P04 | Sequence | 470 | 008772 (8) | gb|KJB09427.1| | 6e-82 | hypothetical protein B456_001G141300 [Gossypium raimondii] gb|KJB09428.1| hypoth | 747 | 002728 (8) | ref|XP_002302734.1| | 3e-129 | Fumarate hydratase 1 family protein [Populus trichocarpa] gb|EEE82007.1| Fumarat |
| JMSF027O01 | Sequence | 635 | 008772 (8) | ref|XP_009622148.1| | 3e-133 | PREDICTED: fumarate hydratase 1, mitochondrial isoform X1 [Nicotiana tomentosif | 770 | 002728 (8) | ref|XP_007200983.1| | 2e-68 | hypothetical protein PRUPE_ppa004758mg [Prunus persica] gb|EMJ02182.1| hypotheti |
This contig is upended
. : . : . : . : . : . :
JMSF027O01+ TGAGT
____________________________________________________________
consensus TGAGT
. : . : . : . : . : . :
JMSF027O01+ ACGCCCAATTTTGATGATGTCCTTGAATTCAACAGACTTTGAATGTAGTGAAGTATGCAG
____________________________________________________________
consensus ACGCCCAATTTTGATGATGTCCTTGAATTCAACAGACTTTGAATGTAGTGAAGTATGCAG
. : . : . : . : . : . :
JMSF027O01+ TTGTTTCAGGTTTGGCAATAATCTCTTATTAATCTCCATTGCAGCTGCGATATGCATCAC
JMFF049J03+ GATATGCATCAC
JMFF018I04+ TCTTATTAATTTCCATTGCAGCTGCGATATGCATCAC
____________________________________________________________
consensus TTGTTTCAGGTTTGGCAATAATCTCTTATTAATTTCCATTGCAGCTGCGATATGCATCAC
. : . : . : . : . : . :
JMSF027O01+ AGTAGGAAATGTGTCATTGGAAGATTGTGATCTGTTCACATGGTCATTTGGGTGTACAGC
JMFF049J03+ AGTAGGAAATGTATCATTGGAAGATTGTGATCTGTTCACATGGTCATTTGGGTGTACACC
JMFF018I04+ AGTAGGAAATGTATCATTGGAAGATTGTGATCTGTTCACATGGTCATTTGGGTGTACACC
JMFF017E16+ TCACATGGTCATTTGGGTGTACAGC
____________________________________________________________
consensus AGTAGGAAATGTATCATTGGAAGATTGTGATCTGTTCACATGGTCATTTGGGTGTACAGC
. : . : . : . : . : . :
JMSF027O01+ TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
JMFF049J03+ TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
JMSF016P04+ ATTGGC
JMFF018I04+ TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
JMFF004F08+ CATTGGC
JMFF017E16+ TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
____________________________________________________________
consensus TTTTTCACCTCGTTTATGACCAAGAATTTCAGCTGCTCTGTTTGCTATAACCTCATTGGC
. : . : . : . : . : . :
JMSF027O01+ ATTCATGTTACTTTGTGTGCCACTACCAGTCTGCCAAACCACCAAAGGAAAATGGTCATT
JMFF049J03+ ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
JMSF016P04+ ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
JMFF024D21+ ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
JMFF018I04+ ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
JMFF004F08+ ATTCATGTTACTTTGTGTGCCACTACCAGTCTGCCAAACCACCAAAGGAAAATGGTCATT
JMFF017E16+ ATTCATGTTACTTTGTGTGCCACTACCAGTCTGCCAAACCACCAAAGGAAAATGGTCATT
____________________________________________________________
consensus ATTCATGTTACTTTGTGTTCCACTACCAGTCTGCCAAATCACCAAAGGAAAATGGTCATT
. : . : . : . : . : . :
JMSF027O01+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCTTTCCCTATGGATGGCTC
JMFF049J03+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
JMSF016P04+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
JMFF024D21+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
JMFF047C18+ GGATGGCTC
JMFF018I04+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
JMFF004F08+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCTTTCCCTATGGATGGCTC
JMFF017E16+ TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCTTTCCCTATGGATGGCTC
____________________________________________________________
consensus TAGTTTTCCTTCAGCAACTTCTTGGGCAGCCTGCATTACTGCCTTCCCTATGGATGGCTC
. : . : . : . : . : . :
JMSF027O01+ AAGGCCATACTCCATATTCACCTTGGCTGCACACTTCTTAAGAACACCAAATGCACGTAT
JMFF049J03+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMSF016P04+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMFF024D21+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMFF047C18+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMFF018I04+ AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
JMFF004F08+ AAGGCCATACTCCATATTCACCTTGGCTGCACACTTCTTAAGAACACCAAATGCACGTAT
JMFF017E16+ AAGGCCATACTCCATATTCACCTTGGCTGCACACTTCTTAAGAACACCAAATGCACGTAT
____________________________________________________________
consensus AAGGCCATACTCCATATTCACCTTGGCTGCACATTTCTTAAGAATACCAAATGCCCGAAT
. : . : . : . : . : . :
JMSF027O01+ AATAGGTTCAGGCATTCTTTCCCTGTCACCGCCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF049J03+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMSF016P04+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF024D21+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF047C18+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF018I04+ AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF004F08+ AATAGGTTCAGGCATTCTTTCCCTGTCACCGCCAATTTCAAAGTTCTGCAATGATCTTTG
JMFF017E16+ AATAGGTTCAGGCATTCTTTCCCTGTCACCGCCAATTTCAAAGTTCTGCAATGATCTTTG
____________________________________________________________
consensus AATAGGTTCAGGCATTCTTTCCCTGTCACCACCAATTTCAAAGTTCTGCAATGATCTTTG
. : . : . : . : . : . :
JMSF027O01+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTATCTCTCTC
JMFF049J03+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMSF016P04+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMFF024D21+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMFF047C18+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMFF018I04+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
JMFF004F08+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTATCTCTCTC
JMFF017E16+ AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTATCTCTCTC
____________________________________________________________
consensus AGTTTGTGCCCCCCATAACTTGTCGGAGGGGACTTGAATGGGGCCGAAAGTGTCTCTCTC
. : . : . : . : . : . :
JMSF027O01+ CTCCCGGAAGGAAGTAGAGAAATATCTCCAGCACGTCGTATAACGCAGCGACTCTGAAGA
JMFF049J03+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMSF016P04+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMFF024D21+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMFF047C18+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMFF018I04+ CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
JMFF004F08+ CTCCCGGAAGGAAGTAGAGAAATATCTCCAGCACGTCGTATAACGCAGCGACTCTGAAGA
JMFF017E16+ CTCCCGGAAGGAAGTAGAGAAATATCTCCAGCACGTCGTATAACGCAGCGACTCTGAAGA
____________________________________________________________
consensus CTCTCGGAATGAAGTAGAGAAATATCTCCAGCACACCGTATAACGCAGCGACTCGGAAGA
. : . : . : . : . : . :
JMSF027O01+ AACGGACCTCGTCGATCCACCTGTTACTC
JMFF049J03+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMSF016P04+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMFF024D21+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMFF047C18+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMFF018I04+ GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
JMFF004F08+ AACGGACCTCGTCGATCCACCTGTTACTCGACGAGCAGCTATTAGCATAGCCATTTGTAT
JMFF017E16+ AACGGACCTCGTCGATCCACCTGTTACTCGACGAGCAGCTATTAGCATAGCCATTTGTAT
____________________________________________________________
consensus GATGGACCTCGTCGATCCACATGTTACTCGACGGGCAGCTATTAGCATAGCCATTTGTGT
. : . : . : . : . : . :
JMFF049J03+ TTCCC
JMSF016P04+ TTCCCGTATACTCGAACCGCAACCAAAACCCGATAACAGCCGC
JMFF024D21+ TTCCC
JMFF047C18+ TTCCC
JMFF018I04+ TTCCCGTATACTCGAACCGCAACCAAAACCCGATAACAGCCGCACCGATCT
JMFF004F08+ TTCC------------CAACAACCAAAAGCCGATAACAGCCGCCGCTGCCGCCAATCTAG
JMFF017E16+ TTCC------------CAACAACCAAAAGCCGATAACAGCCGCCGCTGCCGCCAATCTAG
____________________________________________________________
consensus TTCCCGTATACTCGAACCGCAACCAAAAGCCGATAACAGCCGCCGCTGCCGCCAATCTAG
. : . : . : . : . : . :
JMFF004F08+ AAGCACGATTGACCGATCAAACGGACTAGTATGCAAAGAAAAACTGGAAAAATTGAAA
JMFF017E16+ AAGCACGATTGACCGATCAAACGGACTAGTATGCAAAGAAAAACTGGAAAAATTGAAAAT
____________________________________________________________
consensus AAGCACGATTGACCGATCAAACGGACTAGTATGCAAAGAAAAACTGGAAAAATTGAAAAT