Contig 008771:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013N24Sequence498008771 (2)ref|XP_007163480.1|1e-45hypothetical protein PHAVU_001G237600g [Phaseolus vulgaris] gb|ESW35474.1| hypot770009659 (2)ref|XP_007026877.1|286Major facilitator superfamily protein isoform 1 [Theobroma cacao] ref|XP_0070268
JMFF017B07Sequence568008771 (2)ref|XP_008391631.1|2e-68PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Malus domestica]

Alignment

This contig is upended


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JMFF017B07+                                          TTGAATGTGACCTCATGAACCCTTNTCGG
                      ____________________________________________________________
consensus                                            TTGAATGTGACCTCATGAACCCTTNTCGG
 
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JMFF013N24+                                                GGGATGAANTGAGACATNGTCAG
JMFF017B07+           GGCTTGACAGTTTGGCACACCACATGCCTTGAGGCTCGGGATGAACTGAGACATTGTCAG
                      ____________________________________________________________
consensus             GGCTTGACAGTTTGGCACACCACATGCCTTGAGGCTCGGGATGAACTGAGACATTGTCAG
 
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JMFF013N24+           AAGACCCAACCCCATAAGGTATAGGATGGAAGAAAAACATGATCATAAAGAAGCGGCCGG
JMFF017B07+           AAGACCCAACCCCATAAGGTATAGGATGGAAG-AAAACATGATCATAAAGAAGCGGCCGG
                      ____________________________________________________________
consensus             AAGACCCAACCCCATAAGGTATAGGATGGAAGAAAAACATGATCATAAAGAAGCGGCCGG
 
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JMFF013N24+           TGTAGGAATCTGCAAGGAATCCTCCCACCATAGGCATAATTGCAGTGACTCCTGACCAGT
JMFF017B07+           TGTAGGAATCTGCAAGGAATCCTCCCACCATAGGCATAATTGCAGTGACTCCTGACCAGT
                      ____________________________________________________________
consensus             TGTAGGAATCTGCAAGGAATCCTCCCACCATAGGCATAATTGCAGTGACTCCTGACCAGT
 
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JMFF013N24+           AATTTGCATTCTTAGCAGCTGTTTTGAGGTTCTGGTGCATAACTTTGGTCAGGTATATGA
JMFF017B07+           AATTTGCATTCTTAGCAGCTGTTTTGAGGTTCTGGTGCATAACTTTGGTCAGGTATATGA
                      ____________________________________________________________
consensus             AATTTGCATTCTTAGCAGCTGTTTTGAGGTTCTGGTGCATAACTTTGGTCAGGTATATGA
 
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JMFF013N24+           TCAGATTTGTTGCAATCCCAAAGAAGCTAAGTCTTTCAGCAAACTCAATTGTTATGATGA
JMFF017B07+           TCAGATTTGTTGCAATCCCAAAGAAGCTAAGTCTTTCAGCAAACTCAATTGTTATGATGA
                      ____________________________________________________________
consensus             TCAGATTTGTTGCAATCCCAAAGAAGCTAAGTCTTTCAGCAAACTCAATTGTTATGATGA
 
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JMFF013N24+           AGAAAGAAGCTTTCCAGACACCAGTGGAAGCCCGGAGAGGGACTCGCCCTCTGTGATCCA
JMFF017B07+           AGAAAGAAGCTTTCCAGACACCAGTGGAAGCCCGGAGAGGGACTCGCCCTCTGTGATCCA
                      ____________________________________________________________
consensus             AGAAAGAAGCTTTCCAGACACCAGTGGAAGCCCGGAGAGGGACTCGCCCTCTGTGATCCA
 
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JMFF013N24+           CCGAAGAATCATGCACCCACTTTTCTCCATCACCATCTCCACCACCACCGCCACCGTCTC
JMFF017B07+           CCGAAGAATCATGCACCCACTTTTCTCCATCACCATCTCCACCACCACCGCCACCGTCTC
                      ____________________________________________________________
consensus             CCGAAGAATCATGCACCCACTTTTCTCCATCACCATCTCCACCACCACCGCCACCGTCTC
 
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JMFF013N24+           TGGTGGCTCCGCCATTGTTTCCGCTCTCCGTTTTCATGGCCGATCTCTACTGATCGAACC
JMFF017B07+           TGGTGGCTCCGCCATTGTTTCCGCTCTCCGTTTTCATGGCCGATCTCTACTGATCGAACC
                      ____________________________________________________________
consensus             TGGTGGCTCCGCCATTGTTTCCGCTCTCCGTTTTCATGGCCGATCTCTACTGATCGAACC
 
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JMFF013N24+           AGCTGCGCTGAAGCTATATATCTACACTCTTTACTTTTAAATGGTTGATTAGT       
JMFF017B07+           AGCTGCGCTGAAGCTATATATCTACACTCTTTACTTTTAAATGGTTGATTAGTAGATAGT
                      ____________________________________________________________
consensus             AGCTGCGCTGAAGCTATATATCTACACTCTTTACTTTTAAATGGTTGATTAGTAGATAGT