Contig 008769:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015P15Sequence537008769 (2)ref|XP_006359095.1|2e-13PREDICTED: BTB/POZ domain-containing protein At1g30440-like [Solanum tuberosum]672011023 (2)ref|XP_009763589.1|3e-80PREDICTED: BTB/POZ domain-containing protein At1g30440 [Nicotiana sylvestris]
JMSF005L06Sequence417008769 (2)ref|XP_006359095.1|4e-14PREDICTED: BTB/POZ domain-containing protein At1g30440-like [Solanum tuberosum]486011023 (2)ref|XP_009763589.1|1e-42PREDICTED: BTB/POZ domain-containing protein At1g30440 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF005L06+                                                    TGTGAAGATNGGAAGGACA
                      ____________________________________________________________
consensus                                                      TGTGAAGATNGGAAGGACA
 
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JMSF005L06+           TTTCCCCCAACTTCAACAACAATATCGCTTGGGAGACCACTTGTGCAGAACCATGCTTGC
JMFF015P15+               CCCCAACTTCAACAACAATATCGCTTGGGAGACCACTTGTGCAGAACCATGCTTGC
                      ____________________________________________________________
consensus             TTTCCCCCAACTTCAACAACAATATCGCTTGGGAGACCACTTGTGCAGAACCATGCTTGC
 
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JMSF005L06+           CCTTTCCTCTGGAACGCATCTGTTTTTGATCCCAGCTTCATACAAGCCATCTCTCCACAG
JMFF015P15+           CCTTTCCTCTGGAACGCATCTGTTTTTGATCCCAGCTTCATACAAGCCATCTCTCCACAG
                      ____________________________________________________________
consensus             CCTTTCCTCTGGAACGCATCTGTTTTTGATCCCAGCTTCATACAAGCCATCTCTCCACAG
 
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JMSF005L06+           TCCACAGTGNTACTCCTAACNTAAGCTTCCTCAATTTCACCCACAAAAATCAAAATCTTC
JMFF015P15+           TCCACAGTGCTACTCCTAACCTAAGCTTCCTCAATTTCACCCACAAAAATCAAAATCTTC
                      ____________________________________________________________
consensus             TCCACAGTGCTACTCCTAACCTAAGCTTCCTCAATTTCACCCACAAAAATCAAAATCTTC
 
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JMSF005L06+           AACCTCGAAACCCAATCTCTCAAATTCTTGAACGAATGGAGAAATTGGAGACACCCAATC
JMFF015P15+           AACCTCGAAACCCAATCTCTCAAATTCTTGAACGAATGGAGAAATTGGAGACACCCAATC
                      ____________________________________________________________
consensus             AACCTCGAAACCCAATCTCTCAAATTCTTGAACGAATGGAGAAATTGGAGACACCCAATC
 
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JMSF005L06+           CTCAAAGACACCAACTGTTAACAAAAACACTCAACAAAACCCTCAAATCGATCATTGAAA
JMFF015P15+           CTCAAAGACACCAACTGTTAACAAAAACACTCAACAAAACCCTCAAATCGATCATTGAAA
                      ____________________________________________________________
consensus             CTCAAAGACACCAACTGTTAACAAAAACACTCAACAAAACCCTCAAATCGATCATTGAAA
 
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JMSF005L06+           CCACTCCAAACACTAATACGCCAATGTAGCAAATATACTAAATGCCCCCACTTGTGAATA
JMFF015P15+           CCACTCCAAACACTAATACGCCAATGTAGCAAATATACTAAATGCCCCCACTTGTGAATA
                      ____________________________________________________________
consensus             CCACTCCAAACACTAATACGCCAATGTAGCAAATATACTAAATGCCCCCACTTGTGAATA
 
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JMSF005L06+           AACCCAAAAAATNTNTGTTTGGGAAATTTTAGGTC                         
JMFF015P15+           AACCCAAAAAATCTCTGTTTGGGAAATTTTAGGTCAACTCCTCTGACACATCCACTTTCC
                      ____________________________________________________________
consensus             AACCCAAAAAATCTCTGTTTGGGAAATTTTAGGTCAACTCCTCTGACACATCCACTTTCC
 
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JMFF015P15+           TTTTAACCACCAGAAGATTCCAAAATACAACTCTTCAAGCTCAATTTATTATGAGCGCTA
                      ____________________________________________________________
consensus             TTTTAACCACCAGAAGATTCCAAAATACAACTCTTCAAGCTCAATTTATTATGAGCGCTA
 
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JMFF015P15+           TAAAATGGGTAAAGTATAAAGTATAAACGGCAGCTAAGAAAGATTAAACAACCCACAAGC
                      ____________________________________________________________
consensus             TAAAATGGGTAAAGTATAAAGTATAAACGGCAGCTAAGAAAGATTAAACAACCCACAAGC