Contig 008767:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS080A05-                                                     GAACTAGTCTCGAGTTTT
                      ____________________________________________________________
consensus                                                       GAACTAGTCTCGAGTTTT
 
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JMFS080A05-           TTTTTTTTTTTTTTAATAAAATAGTTCTGCATCACTCATTCCATACGAAAAAAGATCCAA
                      ____________________________________________________________
consensus             TTTTTTTTTTTTTTAATAAAATAGTTCTGCATCACTCATTCCATACGAAAAAAGATCCAA
 
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rJMFF015G21-          CTGAAGCTACTTGGAACTGGCAATTGTGTTCTAATAATAATAATAATACAGTATCATAAT
rJMSF007J06-                                                            GTATCATAAT
JMFS080A05-           CTGAAGCTACTTGGAACTGGCAATTGTGTTCTAATAATAATAATAATACAGTATCATAAT
                      ____________________________________________________________
consensus             CTGAAGCTACTTGGAACTGGCAATTGTGTTCTAATAATAATAATAATACAGTATCATAAT
 
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rJMFF015G21-          AATTATACNGATCATGATTATCTGTATAAAAGAAATCAATACTCTTGTCGCGAGGCGTTA
rJMSF007J06-          AATTATACAGATCATGATTATCTGTATAAAAGAGATCAATACGCTTGTCGCGAGGCGTAN
JMFS080A05-           AATTATACAGATCATGATTATCTGTATAAAAGAAATCAATACTCTTGTCGCGAGGCGTTA
                      ____________________________________________________________
consensus             AATTATACAGATCATGATTATCTGTATAAAAGAAATCAATACTCTTGTCGCGAGGCGTTA
 
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rJMFF015G21-          TTACTGTTTTCTGTTCTTTGTCAACTACAAAATGCCATTTCCACCGATTTA         
rJMSF007J06-          TNACNGNTNNCNGTNCTTTGNCAGCTACAAAATGCCATTTCCACCGATTTANCAATTANG
JMFS080A05-           TTACTGTTTTCTGTTCTTTGTCAACTACAAAATGCCATTTCCACCGATTTATCAATTATG
JMFN046J07+                                   CTACAAAATGCCATTTCCACCGATTTATCAATTATG
                      ____________________________________________________________
consensus             TTACTGTTTTCTGTTCTTTGTCAACTACAAAATGCCATTTCCACCGATTTATCAATTATG
 
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rJMSF007J06-          CCNTGGNTTTCAAGA                                             
JMFS080A05-           CCTTGGCTTTCAAGAGTTTAGCTTTCAGTTCATCTGCCACAGCGTCGATGAATTCTTCAG
JMFN046J07+           CCTTGGCTTTCAAGAGTTTAGCTTTCAGTTCATCTGCCACAGCGTCGATGAATTCTTCAG
                      ____________________________________________________________
consensus             CCTTGGCTTTCAAGAGTTTAGCTTTCAGTTCATCTGCCACAGCGTCGATGAATTCTTCAG
 
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JMFS080A05-           TGTTTAGATATGTGTCCCTTGAAAGCTTTGACCCATGGATGATAAGTGCAAGATCCTTGG
JMFN046J07+           TGTTTAGATATGTGTCCCTTGAAAGCTTTGACCCATGGATGATAAGTGCAAGATCCTTGG
                      ____________________________________________________________
consensus             TGTTTAGATATGTGTCCCTTGAAAGCTTTGACCCATGGATGATAAGTGCAAGATCCTTGG
 
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JMFS080A05-           TCATTTTTCCAGACTCCACAGCACCAATGCAAGCTGCTTCAAGCTTCTCGGTGAAATCCA
JMFN046J07+           TCATTTTTCCAGACTCCACAGCACCAATGCAAGCTGCTTCAAGCTTCTCGGTGAAATCCA
                      ____________________________________________________________
consensus             TCATTTTTCCAGACTCCACAGCACCAATGCAAGCTGCTTCAAGCTTCTCGGTGAAATCCA
 
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JMFS080A05-           AGAGTCTATCGTTGTTGTCCAACTTAGCCCTGTGAGCAAGTCCTCGTGTCCAAGCAAAGA
JMFN046J07+           AGAGTCTATCGTTGTTGTCCAACTTAGCCCTGTGAGCAAGTCCTCGTGTCCAAGCAAAGA
                      ____________________________________________________________
consensus             AGAGTCTATCGTTGTTGTCCAACTTAGCCCTGTGAGCAAGTCCTCGTGTCCAAGCAAAGA
 
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JMFS080A05-           TGGAGGCAATGCTGTTGGTGCTGGTTTCACCACCCTTCTGATGAACTCTGTAGTGGCGGG
JMFN046J07+           TGGAGGCAATGCTGTTGGTGCTGGTTTCACCACCCTTCTGATGAACTCTGTAGTGGCGGG
JMFS149D11+                                                                  GCGGG
                      ____________________________________________________________
consensus             TGGAGGCAATGCTGTTGGTGCTGGTTTCACCACCCTTCTGATGAACTCTGTAGTGGCGGG
 
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JMFS080A05-           TGACAGTTCCGTGGGCTGCTTCAGCCTCAATAGTTNTTCCATCAGGGCAAATC       
JMFN046J07+           TGACAGTTCCGTGGGCTGCTTCAGCCTCAATAGTTTTTCCATCAGGGCAAATC       
JMFS149D11+           TGACAGTTCCGTGGGCTGCTTCAGCCTCAATAGTTTTTCCATCAGGGCAAATCAGGACAG
                      ____________________________________________________________
consensus             TGACAGTTCCGTGGGCTGCTTCAGCCTCAATAGTTTTTCCATCAGGGCAAATCAGGACAG
 
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JMFS149D11+           ATGTCATCAACCCAAGGGATCCAAAACCTTGAGCTAGGAAATCACTCTGCACATCCCCAT
                      ____________________________________________________________
consensus             ATGTCATCAACCCAAGGGATCCAAAACCTTGAGCTAGGAAATCACTCTGCACATCCCCAT
 
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JMFS149D11+           CATAGTTCTTGCATGCCCATACATAACCACCATCACTCTTCAATGCATAAGCAACCATAT
                      ____________________________________________________________
consensus             CATAGTTCTTGCATGCCCATACATAACCACCATCACTCTTCAATGCATAAGCAACCATAT
 
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JMFS149D11+           CATCAATGAGACGGTGTTCGTACCAAATTCCAGCCTCTTCAAACTTTGATTTCCATTGAG
                      ____________________________________________________________
consensus             CATCAATGAGACGGTGTTCGTACCAAATTCCAGCCTCTTCAAACTTTGATTTCCATTGAG
 
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JMFS149D11+           CTTCATAGACTTCTTGGAAGATGTCCTTAAACCTCCCATCATATTTCTTGAGAATGGTAT
                      ____________________________________________________________
consensus             CTTCATAGACTTCTTGGAAGATGTCCTTAAACCTCCCATCATATTTCTTGAGAATGGTAT
 
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JMFS149D11+           TTTTTGTACTGAGATACAAGGGCCATTTCTTTTGGTATGCCATATTCATTGAAGCATCAG
                      ____________________________________________________________
consensus             TTTTTGTACTGAGATACAAGGGCCATTTCTTTTGGTATGCCATATTCATTGAAGCATCAG
 
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JMFS149D11+           CAAAAGCATGAATAGACTCATCTGTGTTGTACATGGCAAGGGCAACTCCTCCAGCCCCAG
                      ____________________________________________________________
consensus             CAAAAGCATGAATAGACTCATCTGTGTTGTACATGGCAAGGGCAACTCCTCCAGCCCCAG
 
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JMFS149D11+           TGAAATTGAAAACCTCTAGCTCAGTCTTTTCATCCTTACCTTCTGGTACAAAAACAAGTT
JMFF015G21+                                                     CTGGTACAAAAACAAGTT
                      ____________________________________________________________
consensus             TGAAATTGAAAACCTCTAGCTCAGTCTTTTCATCCTTACCTTCTGGTACAAAAACAAGTT
 
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JMFS149D11+           TGAGTTTTCCAGCTCCTTGAATAACTGCATCAGTTGCGCGGTACTGATCAC         
JMFF015G21+           TGAGTTTTCCAGCTCCTTGAATAACTGCATCAGTTGCGCGGTACTGATCACCAAATGCAT
                      ____________________________________________________________
consensus             TGAGTTTTCCAGCTCCTTGAATAACTGCATCAGTTGCGCGGTACTGATCACCAAATGCAT
 
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JMFF015G21+           GTCTTCCAATGCATATTGGTTTGTTCCAACTTGGGACAAGGCGGGGAATGTTCTTGCAAA
                      ____________________________________________________________
consensus             GTCTTCCAATGCATATTGGTTTGTTCCAACTTGGGACAAGGCGGGGAATGTTCTTGCAAA
 
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JMFF015G21+           GAATTGATTCTCTGAATACAGTGCCATTCAAAATGTTCCTAATTGTCCCATTTGGACTCT
                      ____________________________________________________________
consensus             GAATTGATTCTCTGAATACAGTGCCATTCAAAATGTTCCTAATTGTCCCATTTGGACTCT
 
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JMFF015G21+           TCCACATATTCTTCAAGCTGAACTCCTTCACACGAGCTTCATCTGGAGTTATTGTTGCAC
                      ____________________________________________________________
consensus             TCCACATATTCTTCAAGCTGAACTCCTTCACACGAGCTTCATCTGGAGTTATTGTTGCAC
 
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JMSF007J06+                               TTCAAGGTAGCCTCTGCACTTTCAACTGTAACCTTATCAT
JMFF015G21+           ACTTAATTGCTACATTATACTTCAAGGTAGCCTCTGCACTTTCAACTGTAACCTTATCAT
                      ____________________________________________________________
consensus             ACTTAATTGCTACATTATACTTCAAGGTAGCCTCTGCACTTTCAACTGTAACCTTATCAT
 
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JMSF007J06+           CTGTGGCATCACGGTGAGGAAGGCCAAGGTCAAAGTACTTTATATCCAACTCCAGAAAAG
JMFF015G21+           CTGTGGCATCACGGTGAGGAAGGCCAAGGTCAAAGTACTTTATATCCAACTCCAGAAAAG
                      ____________________________________________________________
consensus             CTGTGGCATCACGGTGAGGAAGGCCAAGGTCAAAGTACTTTATATCCAACTCCAGAAAAG
 
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JMSF007J06+           GCAGAATGAGCTTATCCTTGATTGATTGCCAAATCACTCGGGTCATTTCATCCCCGTCCA
JMFF015G21+           GCAGAATGAGCTTATCCTTGATTGATTGCCAAATCACTCGGGTCATTTCATCCCCGTCCA
                      ____________________________________________________________
consensus             GCAGAATGAGCTTATCCTTGATTGATTGCCAAATCACTCGGGTCATTTCATCCCCGTCCA
 
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JMSF007J06+           TCTCGACGATGGGGTTGGTAACCTTGATCTTCTCGAAAGCCATTCCGGATGGATCGGAGA
JMFF015G21+           TCTCGACGATGGGGTTGGTAACCTTGATCTTCTCGAAAGCCATTCCGGATGGATCGGAGA
                      ____________________________________________________________
consensus             TCTCGACGATGGGGTTGGTAACCTTGATCTTCTCGAAAGCCATTCCGGATGGATCGGAGA
 
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JMSF007J06+           ATCAAACTCAGGCTAGTGTGAGAGATTCGGAGATTACAGGAGAGATCTCCGGCGGCGAAG
JMFF015G21+           ATCAAACTCAGGCTAGCGTGAGAGATTCGGAGATTACAGGAGAGATCTCCGGCGGCGAAG
                      ____________________________________________________________
consensus             ATCAAACTCAGGCTAGTGTGAGAGATTCGGAGATTACAGGAGAGATCTCCGGCGGCGAAG
 
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JMSF007J06+           AAACTGGAGAGAGTAAGTAGAGAGCGGTGAAGTAGGTGGGCGCAGAGGCAACGG      
JMFF015G21+           AAACTGGAGAGAGTAAGTAGAGAGCGGTGAAGTAGGTGGGCGCAGAGGCAACGGAGAGGA
                      ____________________________________________________________
consensus             AAACTGGAGAGAGTAAGTAGAGAGCGGTGAAGTAGGTGGGCGCAGAGGCAACGGAGAGGA