Contig 008762:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014A10Sequence535008762 (6)gb|AHF50442.1|3e-40su, partial [Nicotiana tabacum]587013662 (4)emb|CDP04687.1|4e-45unnamed protein product [Coffea canephora]
JMSF009N15Sequence233008762 (6)gb|AHF50442.1|1e-10su, partial [Nicotiana tabacum]
JMSF016A22Sequence426008762 (6)gb|AHF50442.1|5e-54su, partial [Nicotiana tabacum]657013662 (4)ref|XP_010108425.1|1e-63Magnesium-chelatase subunit chlI [Morus notabilis] gb|EXC19453.1| Magnesium-chel
JMSF029F09Sequence621008762 (6)ref|XP_004248139.1|8e-94PREDICTED: magnesium-chelatase subunit ChlI, chloroplastic [Solanum lycopersicu684013662 (4)ref|XP_010108425.1|2e-89Magnesium-chelatase subunit chlI [Morus notabilis] gb|EXC19453.1| Magnesium-chel
JMSF044N06Sequence744008762 (6)ref|XP_004248139.1|1e-109PREDICTED: magnesium-chelatase subunit ChlI, chloroplastic [Solanum lycopersicu558013662 (4)emb|CDP04687.1|3e-31unnamed protein product [Coffea canephora]
JMSF047E21Sequence661008762 (6)ref|XP_004248139.1|4e-94PREDICTED: magnesium-chelatase subunit ChlI, chloroplastic [Solanum lycopersicu

Alignment

This contig is upended


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JMSF044N06+                                                               CCGAGGCA
                      ____________________________________________________________
consensus                                                                 CCGAGGCA
 
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JMSF044N06+           GCAGAATCCAAAAGCACATCCACTAAATGGTCATCCAAAAGATTCACNTCATCGACATAA
                      ____________________________________________________________
consensus             GCAGAATCCAAAAGCACATCCACTAAATGGTCATCCAAAAGATTCACNTCATCGACATAA
 
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JMSF029F09+                                                                  CGGTG
JMSF044N06+           AGAATCCCTCTATTAGCTTTAGCAAGAAGCCCGGGCTCGAAAGCTTTTACGCCCTCGGTG
JMSF047E21+                                                                  CGGTG
                      ____________________________________________________________
consensus             AGAATCCCTCTATTAGCTTTAGCAAGAAGCCCGGGCTCGAAAGCTTTTACGCCCTCGGTG
 
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JMSF029F09+           AGAGCCTTCTCGATGTCGATCGTCCCACAAACCCGATCCTCGGTAGCGCCAAGTGGCAGG
JMSF044N06+           AGAGCCTTCTCGATGTCGATCGTCCCACAAACCCGATCCTCGGTAGCGCCAAGTGGCAGG
JMSF047E21+           AGAGCCTTCTCGATGTCGATCGTCCCACAAACCCGATCCTCGGTAGCGCCAAGTGGCAGG
                      ____________________________________________________________
consensus             AGAGCCTTCTCGATGTCGATCGTCCCACAAACCCGATCCTCGGTAGCGCCAAGTGGCAGG
 
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JMSF029F09+           TCAACCATGTTGATTTTGGTCAGCGCCACGGGAAGGTCTTCACCCGTCGTAATCTTCTCT
JMSF044N06+           TCAACCATGTTGATTTTGGTCAGCGCCACGGGAAGGTCTTCACCCGTCGTAATCTTCTCT
JMSF047E21+           TCAACCATGTTGATTTTGGTCAGCGCCACGGGAAGGTCTTCACCCGTCGTAATCTTCTCT
                      ____________________________________________________________
consensus             TCAACCATGTTGATTTTGGTCAGCGCCACGGGAAGGTCTTCACCCGTCGTAATCTTCTCT
 
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JMSF029F09+           CGGATTTCGACACTCATTACCTCGGGATCATCTGGGTCCGAGTTGAACGGATCACCAGCA
JMSF044N06+           CGGATTTCGACACTCATTACCTCGGGATCATCTGGGTCCGAGTTGAACGGATCACCAGCA
JMSF047E21+           CGGATTTCGACACTCATTACCTCGGGATCATCTGGGTCCGAGTTGAACGGATCACCAGCA
                      ____________________________________________________________
consensus             CGGATTTCGACACTCATTACCTCGGGATCATCTGGGTCCGAGTTGAACGGATCACCAGCA
 
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JMSF029F09+           ACTACTTTGATTTCGGGAAGTAAATCTACCAACGATCGAACCGTAGTGGACTTCCCAGTT
JMSF044N06+           ACTACTTTGATTTCGGGAAGTAAATCTACCAACGATCGAACCGTAGTGGACTTCCCAGTT
JMSF016A22+                     TTTCGGGAAGTAAATCTACCAACGATCGAACCGTAGTGGACTTCCCAGTT
JMSF047E21+           ACTACTTTGATTTCGGGAAGTAAATCTACCAACGATCGAACCGTAGTGGACTTCCCAGTT
                      ____________________________________________________________
consensus             ACTACTTTGATTTCGGGAAGTAAATCTACCAACGATCGAACCGTAGTGGACTTCCCAGTT
 
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JMSF029F09+           CCCCTATCGCCCATAATCATTACGCCTCCAATCTTTGGGTCAATCACGTTGAGCAAAAGA
JMSF044N06+           CCCCTATCGCCCATAATCATTACGCCTCCAATCTTTGGGTCAATCACGTTGAGCAAAAGA
JMSF016A22+           CCCCTATCGCCCATAATCATTACGCCTCCAATCTTTGGGTCAATCACGTTGAGCAAAAGA
JMSF047E21+           CCCCTATCGCCCATAATCATTACGCCTCCAATCTTTGGGTCAATCACGTTGAGCAAAAGA
JMFF014A10+                ATCGCCCATAATCATTACGCCTCCAATCTTTGGGTCAATCACGTTGAGCAAAAGA
                      ____________________________________________________________
consensus             CCCCTATCGCCCATAATCATTACGCCTCCAATCTTTGGGTCAATCACGTTGAGCAAAAGA
 
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JMSF029F09+           CATAATTTCATCTCATCTTGTCCTACTATAGCAGAAAAGGGATAAACTGGCCTGCTTTCA
JMSF044N06+           CATAATTTCATCTCATCTTGTCCTACTATAGCAGAAAAGGGATAAACTGGCCTGCTTTCA
JMSF016A22+           CATAATTTCATCTCATCTTGTCCTACTATAGCAGAAAAGGGATAAACTGGCCTGCTTTCA
JMSF047E21+           CATAATTTCATCTCATCTTGTCCTACTATAGCAGAAAAGGGATAAACTGGCCTGCTTTCA
JMFF014A10+           CATAATTTCATCTCATCTTGTCCTACTATAGCAGAAAAGGGATAAACTGGCCTGCTTTCA
                      ____________________________________________________________
consensus             CATAATTTCATCTCATCTTGTCCTACTATAGCAGAAAAGGGATAAACTGGCCTGCTTTCA
 
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JMSF029F09+           CTAGCTGCAAGCTTCTTAGCCCGTTCTTGAGCAGGGGTAGCTTCAGTGGCAACATTTGAA
JMSF044N06+           CTAGCTGCAAGCTTCTTAGCCCGTTCTTGAGCAGGGGTAGCTTCAGTGGCAACATTTGAA
JMSF009N15+                                  TTCTTGAGCAGGGGTAGCTTCAGTGGCAACATTTGAA
JMSF016A22+           CTAGCTGCAAGCTTCTTAGCCCGTTCTTGAGCAGGGGTAGCTTCAGTGGCAACATTTGAA
JMSF047E21+           CTAGCTGCAAGCTTCTTAGCCCGTTCTTGAGCAGGGGTAGCTTCAGTGGCAACATTTGAA
JMFF014A10+           CTAGCTGCAAGCTTCTTAGCCCGTTCTTGAGCAGGGGTAGCTTCAGTGGCAACATTTGAA
                      ____________________________________________________________
consensus             CTAGCTGCAAGCTTCTTAGCCCGTTCTTGAGCAGGGGTAGCTTCAGTGGCAACATTTGAA
 
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JMSF029F09+           ATTGAAACATGGAATTGAGGCCTCCCCTTGTTCACTGGCAACCCAATCCCTCCATAGAAC
JMSF044N06+           ATTGAAACATGGAATTGAGGCCTCCCCTTGTTCACTGGCAACCCAATCCCTCCATAGAAC
JMSF009N15+           ATTGAAACATGGAATTGAGGCCTCCCCTTGTTCACTGGCAACCCAATCCCTCCATAGAAC
JMSF016A22+           ATTGAAACATGGAATTGAGGCCTCCCCTTGTTCACTGGCAACCCAATCCCTCCATAGAAC
JMSF047E21+           ATTGAAACATGGAATTGAGGCCTCCCCTTGTTCACTGGCAACCCAATCCCTCCATAGAAC
JMFF014A10+           ATTGAAACATGGAATTGAGGCCTCCCCTTGTTCACTGGCAACCCAATCCCTCCATAGAAC
                      ____________________________________________________________
consensus             ATTGAAACATGGAATTGAGGCCTCCCCTTGTTCACTGGCAACCCAATCCCTCCATAGAAC
 
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JMSF029F09+           TTCCTCCCCACACTCAACCCTGATGAAGGGGAGAGGGAGAAGATGGAGGACTTGGAGGGG
JMSF044N06+           TTCCTCCCCACACTCAACCCTGATGAAGGGGAGAGGGAGAAGATGGAGGACTTGGAGGGG
JMSF009N15+           TTCCTCCCCACACTCAACCCTGATGAAGGGGAGAGGGAGAAGATGGAGGACTTGGAGGGG
JMSF016A22+           TTCCTCCCCACACTCAACCCTGATGAAGGGGAGAGGGAGAAGATGGAGGACTTGGAGGGG
JMSF047E21+           TTCCTCCCCACACTCAACCCTGATGAAGGGGAGAGGGAGAAGATGGAGGACTTGGAGGGG
JMFF014A10+           TTCCTCCCCACACTCAACCCTGATGAAGGGGAGAGGGAGAAGATGGAGGACTTGGAGGGG
                      ____________________________________________________________
consensus             TTCCTCCCCACACTCAACCCTGATGAAGGGGAGAGGGAGAAGATGGAGGACTTGGAGGGG
 
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JMSF029F09+           TGAGAAGACAAAGGTTTAGAAGCAAGAATTGCCAGTGTAGAAGAGGAAGTTCCTCCAAGA
JMSF044N06+           TGAGAAGACAAAGGTTTAGAAGCAAGAATTGCCAGTGTAGAAGAGGAAGTTCCTCCAAGA
JMSF009N15+           TGAGAAGACAAAGGTTTAGAAGCAAGAATTGCCAGTGTAGAAGAGGAAGTTCCTCCAAGA
JMSF016A22+           TGAGAAGACAAAGGTTTAGAAGCAAGAATTGCCAGTGTAGAAGAGGAAGTTCCTCCAAGA
JMSF047E21+           TGAGAAGACAAAGGTTTAGAAGCAAGAATTGCCAGTGTAGAAGAGGAAGTTCCTCCAAGA
JMFF014A10+           TGAGAAGACAAAGGTTTAGAAGCAAGAATTGCCAGTGTAGAAGAGGAAGTTCCTCCAAGA
                      ____________________________________________________________
consensus             TGAGAAGACAAAGGTTTAGAAGCAAGAATTGCCAGTGTAGAAGAGGAAGTTCCTCCAAGA
 
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JMSF029F09+           AGAGCAGCCATA                                                
JMSF044N06+           AGAGCAGCCATAGC                                              
JMSF009N15+           AGAGCAGCCATAGC                                              
JMSF016A22+           AGAGCAGCCATAGC                                              
JMSF047E21+           AGAGCAGCCATAGCTAAAGAATGACTGGTTTCAGTGAGTGAAGGTTTTAAAGAAT     
JMFF014A10+           AGAGCAGCCATAGCTAAAGAATGACTGGTTTCAGTGAGTGAAGGTTTTAAAGAATGAATG
                      ____________________________________________________________
consensus             AGAGCAGCCATAGCTAAAGAATGACTGGTTTCAGTGAGTGAAGGTTTTAAAGAATGAATG
 
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JMFF014A10+           TTTGGTGTTGAGCAAAGCGACTTGGCATTGAGTGTTTGGAGGACTACTGGTTACAGTCTG
                      ____________________________________________________________
consensus             TTTGGTGTTGAGCAAAGCGACTTGGCATTGAGTGTTTGGAGGACTACTGGTTACAGTCTG
 
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JMFF014A10+           TGATGGGTTTTGGCCTTTTGGGGTTCTCAGGATAAGAAGATAGATTTCCAATTTTTCCAT
                      ____________________________________________________________
consensus             TGATGGGTTTTGGCCTTTTGGGGTTCTCAGGATAAGAAGATAGATTTCCAATTTTTCCAT