Contig 008761:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013P22Sequence557008761 (2)dbj|BAJ97770.1|4e-49predicted protein [Hordeum vulgare subsp. vulgare]706013725 (2)ref|XP_010313060.1|6e-15PREDICTED: protein NRT1/ PTR FAMILY 4.4-like isoform X2 [Solanum lycopersicum]
JMFF025M11Sequence558008761 (2)dbj|BAJ97770.1|4e-49predicted protein [Hordeum vulgare subsp. vulgare]697013725 (2)ref|XP_009602084.1|1e-12PREDICTED: protein NRT1/ PTR FAMILY 4.3-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF025M11+                                                     CTTAGCTGTGGTAGATGA
JMFF013P22+                                                      TTAGCTGTGGTAGATGA
                      ____________________________________________________________
consensus                                                       CTTAGCTGTGGTAGATGA
 
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JMFF025M11+           GCCTGCACAGCCAGTAACACAAATCCAGAAAGCTCTATGAACCCAAAGATGAGCATGGTC
JMFF013P22+           GCCTGCACAGCCAGTAACACAAATCCAGAAAGCTCTATGAACCCAAAGATGAGCATGGTC
                      ____________________________________________________________
consensus             GCCTGCACAGCCAGTAACACAAATCCAGAAAGCTCTATGAACCCAAAGATGAGCATGGTC
 
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JMFF025M11+           CAGAAGCTGCCCAGATAGGAATCAGAGAGGAAGCCACCAAAGAGGGAGAGGAGGAAGACA
JMFF013P22+           CAGAAGCTGCCCAGATAGGAATCAGAGAGGAAGCCACCAAAGAGGGAGAGGAGGAAGACA
                      ____________________________________________________________
consensus             CAGAAGCTGCCCAGATAGGAATCAGAGAGGAAGCCACCAAAGAGGGAGAGGAGGAAGACA
 
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JMFF025M11+           GTGCCAATGAAGTTTGTGACTATGTTTGCAGATTTTGAGAGAGGGAAATGCATGTCATTG
JMFF013P22+           GTGCCAATGAAGTTTGTGACTATGTTTGCAGATTTTGAGAGAGGGAAATGCATGTCATTG
                      ____________________________________________________________
consensus             GTGCCAATGAAGTTTGTGACTATGTTTGCAGATTTTGAGAGAGGGAAATGCATGTCATTG
 
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JMFF025M11+           AAGACATAAGTGATGAGGTTGTTCCCAACAGCTGCTATCGCCATCATCTCGAACGACATC
JMFF013P22+           AAGACATAAGTGATGAGGTTGTTCCCAACAGCTGCTATCGCCATCATCTCGAACGACATC
                      ____________________________________________________________
consensus             AAGACATAAGTGATGAGGTTGTTCCCAACAGCTGCTATCGCCATCATCTCGAACGACATC
 
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JMFF025M11+           AGGCCTAGTACAAAAACAGCAGCAGCCATGCCACCATGTTTGTCATCCCTGCAAGGTCTG
JMFF013P22+           AGGCCTAGTACAAAAACAGCAGCAGCCATGCCACCATGTTTGTCATCCCTGCAAGGTCTG
                      ____________________________________________________________
consensus             AGGCCTAGTACAAAAACAGCAGCAGCCATGCCACCATGTTTGTCATCCCTGCAAGGTCTG
 
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JMFF025M11+           CCCTTCCAATCAACAGACACTTCCTGGGAATCCTCAGACTCCCCTCTGGAACCTACCTTT
JMFF013P22+           CCCTTCCAATCAACAGACACTTCCTGGGAATCCTCAGACTCCCCTCTGGAACCTACCTTT
                      ____________________________________________________________
consensus             CCCTTCCAATCAACAGACACTTCCTGGGAATCCTCAGACTCCCCTCTGGAACCTACCTTT
 
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JMFF025M11+           TTGGTCCCCCCTCTGTCCATTACCAACAACCTTGGGAAGTTGGGAGTTTTCTAACAGGTG
JMFF013P22+           TTGGTCCCCCCTCTGTCCATTACCAACAACCTTGGGAAGTTGGGAGTTTTCTAACAGGTG
                      ____________________________________________________________
consensus             TTGGTCCCCCCTCTGTCCATTACCAACAACCTTGGGAAGTTGGGAGTTTTCTAACAGGTG
 
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JMFF025M11+           GAAACAATGTCTGTGTGTGGGTGTGTTGTTTCTTTGATGACAGAATCTGTCAGAACAACA
JMFF013P22+           GAAACAATGTCTGTGTGTGGGTGTGTTGTTTCTTTGATGACAGAATCTGTCAGAACAACA
                      ____________________________________________________________
consensus             GAAACAATGTCTGTGTGTGGGTGTGTTGTTTCTTTGATGACAGAATCTGTCAGAACAACA
 
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JMFF025M11+           TAGTCTACTTGAGTTTCTCAGAAACCTAAAAAGTTTGTCTTTCTTTGGTGATTCTGATGC
JMFF013P22+           TAGTCTACTTGAGTTTCTCAGAAACCTAAAAAGTTTGTCTTTCTTTGGTGATTCTGATGC
                      ____________________________________________________________
consensus             TAGTCTACTTGAGTTTCTCAGAAACCTAAAAAGTTTGTCTTTCTTTGGTGATTCTGATGC