| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012O24 | Sequence | 555 | 008758 (8) | ref|XP_009625365.1| | 1e-07 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Nicotiana tomentosiform | 745 | 012261 (4) | ref|XP_004232673.1| | 9e-106 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Solanum lycopersicum] |
| JMFF013B15 | Sequence | 554 | 008758 (8) | ref|XP_009625365.1| | 1e-07 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Nicotiana tomentosiform | 696 | 012261 (4) | ref|XP_004145628.1| | 1e-94 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis sativus] gb|KGN |
| JMFF016D16 | Sequence | 511 | 008758 (8) | ref|XP_009625365.1| | 8e-08 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Nicotiana tomentosiform | 651 | 012261 (4) | gb|KDO36143.1| | 1e-75 | hypothetical protein CISIN_1g037139mg, partial [Citrus sinensis] |
| JMFF050C20 | Sequence | 572 | 008758 (8) | ref|XP_009625365.1| | 1e-07 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Nicotiana tomentosiform | |||||
| JMFS091A01 | Sequence | 620 | 008758 (8) | ref|XP_002322111.2| | 1e-21 | DEAD box RNA helicase family protein [Populus trichocarpa] gb|EEF06238.2| DEAD b | |||||
| JMFS155F06 | Sequence | 624 | 008758 (8) | ref|XP_009625365.1| | 1e-07 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Nicotiana tomentosiform | |||||
| JMSF010A15 | Sequence | 273 | 008758 (8) | ref|XP_004232673.1| | 6e-05 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Solanum lycopersicum] | 445 | 012534 (2) | ref|XP_010113411.1| | 9e-14 | Salicylate O-methyltransferase [Morus notabilis] gb|EXC35438.1| Salicylate O-met |
| JMSF034J01 | Sequence | 635 | 008758 (8) | ref|XP_009625365.1| | 1e-07 | PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Nicotiana tomentosiform | 633 | 012261 (4) | gb|KDO36143.1| | 5e-79 | hypothetical protein CISIN_1g037139mg, partial [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMFS091A01+ GGGAGGTATCCTCAGTG
____________________________________________________________
consensus GGGAGGTATCCTCAGTG
. : . : . : . : . : . :
JMFS091A01+ TTCTCCCAATCGAATGAAAAGCGGAACTTCTCACTAGGCTTAATGACTCGTTTCTTAGGT
____________________________________________________________
consensus TTCTCCCAATCGAATGAAAAGCGGAACTTCTCACTAGGCTTAATGACTCGTTTCTTAGGT
. : . : . : . : . : . :
JMFS091A01+ TTCTTAGAGCCCAGATACTGCTCCTTGATGGAATCAAGCTCCTTCTCCCGCTCTCGCTCA
JMSF034J01+ TTCTTAGAGCCCAGATACTGCTCCTTGATGGAATCGAGCTCCTTCTCCCGCTCTCGCTCA
JMFS155F06+ TTGATGGAATCGAGCTCCTTCTCCCGCTCTCGCTCA
____________________________________________________________
consensus TTCTTAGAGCCCAGATACTGCTCCTTGATGGAATCGAGCTCCTTCTCCCGCTCTCGCTCA
. : . : . : . : . : . :
JMFS091A01+ GCGAGTTTGTCCAGTCGAGCACGCTCCCGTTCTTTGGCCTCATCCTCGCGTTCCCTTTCG
JMSF034J01+ GCGAGTTTGTCCAGTCGAGCACGCTCCCGTTCTTTGGCCTCATCCTCGCGTTCCCTTTCG
JMFS155F06+ GCGAGTTTGTCCAGTCGAGCACGCTCCCGTTCTTTGGCCTCATCCTCGCGTTCCCTTTCG
JMFF012O24+ CTCGCGTTCCCTTTCG
JMFF050C20+ GTTCTTTGGCCTCATCCTCGCGTTCCCTTTCG
JMFF013B15+ CGCGTTCCCTTTCG
____________________________________________________________
consensus GCGAGTTTGTCCAGTCGAGCACGCTCCCGTTCTTTGGCCTCATCCTCGCGTTCCCTTTCG
. : . : . : . : . : . :
JMFS091A01+ CGCTTCCTGCGCTCTGACTCGCGGTCCCGGTCACGCTCCCTGTCTCTTTCACGTTCTCTA
JMSF034J01+ CGCTTCCTGCGCTCTGACTCGCGGTCCCGGTCACGCTCCCTGTCTCTTTCACGTTCTCTA
JMFS155F06+ CGCTTCCTGCGCTCTGACTCGCGGTCCCGGTCACGCTCCCTGTCTCTTTCACGTTCTCTA
JMFF016D16+ CCCTGTCTCTTTCACGTTCTCTA
JMFF012O24+ CGCTTCCTGCGCTCTGACTCGCGGTCCCGGTCACGCTCCCTGTCTCTTTCACGTTCTCTA
JMFF050C20+ CGCTTCCTGCGCTCTGACTCGCGGTCCCGGTCACGCTCCCTGTCTCTTTCACGTTCTCTA
JMFF013B15+ CGCTTCCTGCGCTCTGACTCGCGGTCCCGGTCACGCTCCCTGTCTCTTTCACGTTCTCTA
____________________________________________________________
consensus CGCTTCCTGCGCTCTGACTCGCGGTCCCGGTCACGCTCCCTGTCTCTTTCACGTTCTCTA
. : . : . : . : . : . :
JMFS091A01+ TCCCTCTCGCGATCCCGCTCCCTATCCTTATCGCGGGAGGAGCGGTGGTGATCCCTATCG
JMSF034J01+ TCCCTCTCGCGATCCCGCTCCCTATCCTTATCGCGGGAGGAGCGGTGGTGATCCCTATCG
JMFS155F06+ TCCCTCTCGCGATCCCGCTCCCTATCCTTATCGCGGGAGGAGCGGTGGTGATCCCTATCG
JMFF016D16+ TCCCTCTCGCGATCCCGCTCCCTATCCTTATCGCGGGAGGAGCGGTGGTGATCCCTATCG
JMFF012O24+ TCCCTCTCGCGATCCCGCTCCCTATCCTTATCGCGGGAGGAGCGGTGGTGATCCCTATCG
JMFF050C20+ TCCCTCTCGCGATCCCGCTCCCTATCCTTATCGCGGGAGGAGCGGTGGTGATCCCTATCG
JMFF013B15+ TCCCTCTCGCGATCCCGCTCCCTATCCTTATCGCGGGAGGAGCGGTGGTGATCCCTATCG
____________________________________________________________
consensus TCCCTCTCGCGATCCCGCTCCCTATCCTTATCGCGGGAGGAGCGGTGGTGATCCCTATCG
. : . : . : . : . : . :
JMFS091A01+ CGGTCGCGGTCGCGATCATGATCGGAAGAGGGCTTATTGTTATCTTTAGCCGAAGAAGCA
JMSF034J01+ CGGTCGCGGTCGCGATCATGATCGGAAGAGGGCTTATTGTTATCTTTAGCCGAAGAAGCA
JMFS155F06+ CGGTCGCGGTCGCGATCATGATCGGAAGAGGGCTTATTGTTATCTTTAGCCGAAGAAGCA
JMFF016D16+ CGGTCGCGGTCGCGATCATGATCGGAAGAGGGCTTATTGTTATCTTTAGCCGAAGAAGCA
JMFF012O24+ CGGTCGCGGTCGCGATCATGATCGGAAGAGGGCTTATTGTTATCTTTAGCCGAAGAAGCA
JMFF050C20+ CGGTCGCGGTCGCGATCATGATCGGAAGAGGGCTTATTGTTATCTTTAGCCGAAGAAGCA
JMFF013B15+ CGGTCGCGGTCGCGATCATGATCGGAAGAGGGCTTATTGTTATCTTTAGCCGAAGAAGCA
____________________________________________________________
consensus CGGTCGCGGTCGCGATCATGATCGGAAGAGGGCTTATTGTTATCTTTAGCCGAAGAAGCA
. : . : . : . : . : . :
JMFS091A01+ GCGTCGGTAGAAGGGAGTCTGGCTTGTTGCAGAAGAAGCTCGGCGCGGCGCTTTTGCTCA
JMSF034J01+ GCGTCGGTAGAAGGGAGTCTGGCTTGTTGCAGAAGAAGCTCGGCGCGGCGCTTTTGCTCA
JMFS155F06+ GCGTCGGTAGAAGGGAGTCTGGCTTGTTGCAGAAGAAGCTCGGCGCGGCGCTTTTGCTCA
JMFF016D16+ GCGTCGGTAGAAGGGAGTCTGGCTTGTTGCAGAAGAAGCTCGGCGCGGCGCTTTTGCTCA
JMFF012O24+ GCGTCGGTAGAAGGGAGTCTGGCTTGTTGCAGAAGAAGCTCGGCGCGGCGCTTTTGCTCA
JMFF050C20+ GCGTCGGTAGAAGGGAGTCTGGCTTGTTGCAGAAGAAGCTCGGCGCGGCGCTTTTGCTCA
JMFF013B15+ GCGTCGGTAGAAGGGAGTCTGGCTTGTTGCAGAAGAAGCTCGGCGCGGCGCTTTTGCTCA
____________________________________________________________
consensus GCGTCGGTAGAAGGGAGTCTGGCTTGTTGCAGAAGAAGCTCGGCGCGGCGCTTTTGCTCA
. : . : . : . : . : . :
JMFS091A01+ GCAATTTCTTCCTGGCGGCGCTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
JMSF034J01+ GCAATTTCTTCCTGGCGGCGCTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
JMFS155F06+ GCAATTTCTTCCTGGCGGCGCTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
JMFF016D16+ GCAATTTCTTCCTGGCGGCGCTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
JMSF010A15+ CTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
JMFF012O24+ GCAATTTCTTCCTGGCGGCGCTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
JMFF050C20+ GCAATTTCTTCCTGGCGGCGCTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
JMFF013B15+ GCAATTTCTTCCTGGCGGCGCTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
____________________________________________________________
consensus GCAATTTCTTCCTGGCGGCGCTGAATAGCTAACTGCTCTCTCTGCGCTTTGGTGAGGAAG
. : . : . : . : . : . :
JMFS091A01+ ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
JMSF034J01+ ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
JMFS155F06+ ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
JMFF016D16+ ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
JMSF010A15+ ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
JMFF012O24+ ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
JMFF050C20+ ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
JMFF013B15+ ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
____________________________________________________________
consensus ACGGGCTTCTTCGCGCCATCCACTTTACTTCCTAGCTCATCCAATGACCGACTCATATCG
. : . : . : . : . : . :
JMFS091A01+ TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
JMSF034J01+ TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
JMFS155F06+ TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
JMFF016D16+ TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
JMSF010A15+ TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
JMFF012O24+ TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
JMFF050C20+ TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
JMFF013B15+ TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
____________________________________________________________
consensus TCTTTCTCTGTAAACGATAACGATGGTTTCGATCTGCGGCTTCGAAAATTCTGCTTCAGC
. : . : . : . : . : . :
JMFS091A01+ AAA
JMSF034J01+ AAACAGAACTGAATGAAGTTGATGATAGTGCGAAGGGATTTCCAATTTTAGGTTTCGAAA
JMFS155F06+ AAACAGAACTGAATGAAGTTGATGATAGTGCGAAGGGATTTCCAATTTTAGGTTTCGAAA
JMFF016D16+ AAACAGAACTGAATGAAGTTGATGATAGTGCGAAGGGATTTCCAATTTTAGGTTTCGAAA
JMSF010A15+ AAACAGAACTGAATGAAGTTGATGATAGTGCGAAGGGATTTCCAATTTTAGGTTTCGAAA
JMFF012O24+ AAACAGAACTGAATGAAGTTGATGATAGTGCGAAGGGATTTCCAATTTTAGGTTTCGAAA
JMFF050C20+ AAACAGAACTGAATGAAGTTGATGATAGTGCGAAGGGATTTCCAATTTTAGGTTTCGAAA
JMFF013B15+ AAACAGAACTGAATGAAGTTGATGATAGTGCGAAGGGATTTCCAATTTTAGGTTTCGAAA
____________________________________________________________
consensus AAACAGAACTGAATGAAGTTGATGATAGTGCGAAGGGATTTCCAATTTTAGGTTTCGAAA
. : . : . : . : . : . :
JMSF034J01+ TTCCGACGACGAGTGTATGGATCGCTTGGATAAC
JMFS155F06+ TTCCGACGACGAGTGTATGGATCGCTTGGATAACAGCACGAGGGGAAA
JMFF016D16+ TTCCGACGACGAGTGTATGGATCGCTTGGATAACAGCACGAGGGGAAACAATGAACACC
JMSF010A15+ TTCCGACGACGAGTGTATGGATCGCTTGGATAACAGCACGAGGGGAAACAAT
JMFF012O24+ TTCCGACGACGAGTGTATGGATCGCTTGGATAACAGCACGAGGGGAAACAATGAACACC
JMFF050C20+ TTCCGACGACGAGTGTATGGATCGCTTGGATAACAGCACGAGGGGAAACAATGAACACC
JMFF013B15+ TTCCGACGACGAGTGTATGGATCGCTTGGATAACAGCACGAGGGGAAACAATGAACACCC
____________________________________________________________
consensus TTCCGACGACGAGTGTATGGATCGCTTGGATAACAGCACGAGGGGAAACAATGAACACCC