Contig 008757:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J21Sequence560008757 (5)emb|CAD87008.1|4e-67MYB8 protein [Gerbera hybrid cultivar]803008757 (5)emb|CDP02096.1|7e-75unnamed protein product [Coffea canephora]
JMFF012I15Sequence557008757 (5)dbj|BAF96932.1|1e-79R2R3-MYB transcriptional factor [Gentiana triflora]670008757 (5)emb|CDP02096.1|5e-60unnamed protein product [Coffea canephora]
JMFN017J06Sequence619008757 (5)dbj|BAF96932.1|3e-83R2R3-MYB transcriptional factor [Gentiana triflora]

Alignment

This contig is upended


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rJMFF012I15-           TATATTTATATAGGAGGTATACAAATATGGGATGATGGTCATGTATACATTATAGTACG
rJMFF003J21-                        GAGGTATACAAATATGGGATGATGGTCATGTATACATTATAGTACG
                      ____________________________________________________________
consensus              TATATTTATATAGGAGGTATACAAATATGGGATGATGGTCATGTATACATTATAGTACG
 
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rJMFF012I15-          ACGTCGTATATCTGTACTGGGCATATATAACAGACGTAATCATATGTATGGTGAAATATA
rJMFF003J21-          ACGTCGTATATCTGTACTGGGCATATATAACAGACGTAATCATATGTATGGCGAAATATA
                      ____________________________________________________________
consensus             ACGTCGTATATCTGTACTGGGCATATATAACAGACGTAATCATATGTATGGTGAAATATA
 
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rJMFF012I15-          TATAATTCTGCAGTGCTCAATGTACTTGACAACCTTACATCCGGCCAGCTTAATTAATCT
rJMFF003J21-          TATAATTCTGCAGTGCTCAATGTACTTGACAACCTTACATCCGGCCAGCTTAATTAATCT
                      ____________________________________________________________
consensus             TATAATTCTGCAGTGCTCAATGTACTTGACAACCTTACATCCGGCCAGCTTAATTAATCT
 
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rJMFF012I15-          CCGTTGAGAATTTGCATGGACCAGCTGATGTCATCCATGCCCCAAACGGCGTCGTTGGAA
rJMFF003J21-          CCGTTGAGAATTTGCATGGACCAGCTGATGTCATCCATGCCCCAAACGGCGTCGTTGGAA
                      ____________________________________________________________
consensus             CCGTTGAGAATTTGCATGGACCAGCTGATGTCATCCATGCCCCAAACGGCGTCGTTGGAA
 
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rJMFF012I15-          TATTCATGAGAGGGGAAATGATGACCTTGAAAACCGGTCTCGATCTCCATATTACAAACG
rJMFF003J21-          TATTCATGAGAGGGGAAATGATGACCTTGAAAACCGGTCTCGATCTCCATATTACAAACG
JMFF003J21+                                                 CTCGATCTCCATATTACAAACG
JMFF012I15+                                                      TCTCCATATTACAAACG
                      ____________________________________________________________
consensus             TATTCATGAGAGGGGAAATGATGACCTTGAAAACCGGTCTCGATCTCCATATTACAAACG
 
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rJMFF012I15-          AAGGACGATTGCGGTGAAGAGTAGATGTCCCCTTGCCCTATTGAAGAGAGTTGGCTTGCG
rJMFF003J21-          AAGGACGATTGCGGTGAAGAGTAGATGCCCCCTTGCCCTATTGAAGAGAGTTGGCTTGCG
JMFF003J21+           AAGGACGATTGCGGTGAAGAGTAGATGCCCCCTTGCCCTATTGAAGAGAGTTGGCTTGCG
JMFF012I15+           AAGGACGATTGCGGTGAAGAGTAGATGTCCCCTTGCCCTATTGAAGAGAGTTGGCTTGCG
                      ____________________________________________________________
consensus             AAGGACGATTGCGGTGAAGAGTAGATGTCCCCTTGCCCTATTGAAGAGAGTTGGCTTGCG
 
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rJMFF012I15-          CTCGTGCTACTTACTTGATCGGTTTTGTCGCAGGAACCCTGCCCGCTAATTACAGTACTC
rJMFF003J21-          CTCGTGCTACTTACTTGATCGGTTTTGTCGCAGGAACCCTGCCCGCTAATTACAGTACTC
JMFF003J21+           CTCGTGCTACTTACTTGATCGGTTTTGTCGCAGGAACCCTGCCCGCTAATTACAGTACTC
JMFF012I15+           CTCGTGCTACTTACTTGATCGGTTTTGTCGCAGGAACCCTGCCCGCTAATTACAGTACTC
                      ____________________________________________________________
consensus             CTCGTGCTACTTACTTGATCGGTTTTGTCGCAGGAACCCTGCCCGCTAATTACAGTACTC
 
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rJMFF012I15-          TCATTTGTTGCTGCTTCTTGCTTCAGATGCTTCTGTATCCTAGTCCTCCAGAAATTTTTT
rJMFF003J21-          TCATTTGTTGCTGCTTCTTGCTTCAGATGCTTCTGTATCCTAGTCCTCCAGAAATTTTTT
JMFF003J21+           TCATTTGTTGCTGCTTCTTGCTTCAGATGCTTCTGTATCCTAGTCCTCCAGAAATTTTTT
JMFN017J06+                              GCTTCAGATGCTTCTGTATCCTAGTCCTCCAGAAATTTTTT
JMFF012I15+           TCATTTGTTGCTGCTTCTTGCTTCAGATGCTTCTGTATCCTAGTCCTCCAGAAATTTTTT
                      ____________________________________________________________
consensus             TCATTTGTTGCTGCTTCTTGCTTCAGATGCTTCTGTATCCTAGTCCTCCAGAAATTTTTT
 
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rJMFF012I15-          ATCTCGTTATCCGTTCTTCCGGGTAAATGTTTAGCAATTTTTGACCACCTGTTTCCCCAC
rJMFF003J21-          ATCTCGTTATCCGTTCTTCCGGGTAAATGTTTAGCAATTTTTGACCACCTGTTTCCCCAC
JMFF003J21+           ATCTCGTTATCCGTTCTTCCGGGTAAATGTTTAGCAATTTTTGACCACCTGTTTCCCCAC
JMFN017J06+           ATCTCGTTATCCGTTCTTCCGGGTAAATGTTTAGCAATTTTTGACCACCTGTTTCCCCAC
JMFF012I15+           ATCTCGTTATCCGTTCTTCCGGGTAAATGTTTAGCAATTTTTGACCACCTGTTTCCCCAC
                      ____________________________________________________________
consensus             ATCTCGTTATCCGTTCTTCCGGGTAAATGTTTAGCAATTTTTGACCACCTGTTTCCCCAC
 
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rJMFF012I15-          TTAGCATGAAGCTCCATGATCAATAGCTGTTCCTCCGGCGTAATATTGCCCCGCCGGACG
rJMFF003J21-          TTAGCATGAAGCTCCATGATCAATAGCTGTTCCTCCGGCGTAATATTGCCCCGCCGGACG
JMFF003J21+           TTAGCATGAAGCTCCATGATCAATAGCTGTTCCTCCGGCGTAATATTGCCCCGCCGGACG
JMFN017J06+           TTAGCATGAAGCTCCATGATCAATAGCTGTTCCTCCGGCGTAATATTGCCCCGCCGGACG
JMFF012I15+           TTAGCATGAAGCTCCATGATCAATAGCTGTTCCTCCGGCGTAATATTGCCCCGCCGGACG
                      ____________________________________________________________
consensus             TTAGCATGAAGCTCCATGATCAATAGCTGTTCCTCCGGCGTAATATTGCCCCGCCGGACG
 
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rJMFF012I15-          TCCGGTCGAAGGTAGTTCAGCCACCGGAGCCGGCAACTCTTACCGGTACGCTTGAGACCT
rJMFF003J21-          TCCGGTCGAAGGTAGTTCAGCCACCGGAGCCGGCAACTCTTACCGGTACGCTTGAGACCT
JMFF003J21+           TCCGGTCGAAGGTAGTTCAGCCACCGGAGCCGGCAACTCTTACCGGTACGCTTGAGACCT
JMFN017J06+           TCCGGTCGAAGGTAGTTCAGCCACCGGAGCCGGCAACTCTTACCGGTACGCTTGAGACCT
JMFF012I15+           TCCGGTCGAAGGTAGTTCAGCCACCGGAGCCGGCAACTCTTACCGGTACGCTTGAGACCT
                      ____________________________________________________________
consensus             TCCGGTCGAAGGTAGTTCAGCCACCGGAGCCGGCAACTCTTACCGGTACGCTTGAGACCT
 
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rJMFF012I15-          GCGGATCGAGC                                                 
rJMFF003J21-          GCGGATCGAGCCAGAGAATTCCAGACACCTTCGCCGTGATTAGCAATGTAGTTGATGAGA
JMFF003J21+           GCGGATCGAGCCAGAGAATTCCAGACACCTTCGCCGTGATTAGCAATGTAGTTGATGAGA
JMFN017J06+           GCGGATCGAGCCAGAGAATTCCAGACACCTTCGCCGTGATTAGCAATGTAGTTGATGAGA
JMFF012I15+           GCGGATCGAGCCAGAGAATTCCAGACACCTTCGCCGTGATTAGCAATGTAGTTGATGAGA
                      ____________________________________________________________
consensus             GCGGATCGAGCCAGAGAATTCCAGACACCTTCGCCGTGATTAGCAATGTAGTTGATGAGA
 
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rJMFF003J21-          ATCAAGTCTTCCT--ATAGTCCAAGGTCCCTTCCTGATCTCAGGATCATAAGAGCTACTA
JMFF003J21+           ATCAAGTCTTCCT--ATAGTCCAAGGTCCCTTCCTGATCTCAGGATCATAAGAGCTACTA
JMFN017J06+           ATCAAGTCTTCCTCCATAGTCCAAGGTCCCTTCCTGATCTCAGGATCATAAGAGCTACTA
JMFF012I15+           ATCAAGTCTTCCTCCATAGTCCAAGGTCCCTTCCTGATCTCAGGATCATAAGAGCTACTA
                      ____________________________________________________________
consensus             ATCAAGTCTTCCT--ATAGTCCAAGGTCCCTTCCTGATCTCAGGATCATAAGAGCTACTA
 
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rJMFF003J21-          TTGCAGCATGTTTT                                              
JMFF003J21+           TTGCAGCATGTTTTCTTATCCATTTTGATGAGAGGAGAAGATTAATGATTTTGTGGATTC
JMFN017J06+           TTGCAGCATGTTTT                                              
JMFF012I15+           TTGCAGCATGTTTTCTTATCCATTTTGATGAGAGGAGAAGATTAATGATTTTGTGGATTC
                      ____________________________________________________________
consensus             TTGCAGCATGTTTTCTTATCCATTTTGATGAGAGGAGAAGATTAATGATTTTGTGGATTC