| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008C24 | Sequence | 573 | 008756 (5) | gb|KJB21756.1| | 3e-69 | hypothetical protein B456_004G012200 [Gossypium raimondii] | 735 | 003251 (120) | ref|XP_004252814.1| | 2e-115 | PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum] |
| JMFF012F12 | Sequence | 527 | 008756 (5) | gb|KJB21756.1| | 9e-54 | hypothetical protein B456_004G012200 [Gossypium raimondii] | 808 | 006813 (2) | ref|XP_004235314.1| | 3e-19 | PREDICTED: E3 ubiquitin-protein ligase synoviolin [Solanum lycopersicum] ref|XP_ |
| JMFS082C01 | Sequence | 634 | 008756 (5) | gb|KDO50613.1| | 7e-142 | hypothetical protein CISIN_1g008218mg [Citrus sinensis] | |||||
| JMFS127D04 | Sequence | 613 | 008756 (5) | ref|XP_010662120.1| | 4e-88 | PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Vitis vinife | |||||
| JMSF025D21 | Sequence | 642 | 008756 (5) | ref|XP_010662120.1| | 2e-89 | PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Vitis vinife | 743 | 006813 (2) | ref|XP_004235314.1| | 2e-20 | PREDICTED: E3 ubiquitin-protein ligase synoviolin [Solanum lycopersicum] ref|XP_ |
This contig is upended
. : . : . : . : . : . :
JMFS082C01+ TGC
____________________________________________________________
consensus TGC
. : . : . : . : . : . :
JMFS082C01+ TGCCTTTCCAACCATGAACGGAGGCAATGCACGTGAAAAAGATGCCCACAAATGAGTTTC
____________________________________________________________
consensus TGCCTTTCCAACCATGAACGGAGGCAATGCACGTGAAAAAGATGCCCACAAATGAGTTTC
. : . : . : . : . : . :
JMFS082C01+ TTTGCGGTAGTCATCTCCTCACGGCAAATGATGCAGGTAGCATCACTTGCATTGAGTTCT
____________________________________________________________
consensus TTTGCGGTAGTCATCTCCTCACGGCAAATGATGCAGGTAGCATCACTTGCATTGAGTTCT
. : . : . : . : . : . :
JMFS082C01+ TCTGGTGTAGCATCTGGAAAACGATCGTTCATGTTTGAAGTGATCTTCCGATAGCGTATG
____________________________________________________________
consensus TCTGGTGTAGCATCTGGAAAACGATCGTTCATGTTTGAAGTGATCTTCCGATAGCGTATG
. : . : . : . : . : . :
JMFS082C01+ TAATCAGCAATACGAATTTTGAAGTTGCGAAATGTCTCATAAAGCTCCCGAATCAAATGC
____________________________________________________________
consensus TAATCAGCAATACGAATTTTGAAGTTGCGAAATGTCTCATAAAGCTCCCGAATCAAATGC
. : . : . : . : . : . :
JMFS082C01+ AGAGGTACACCATAGTTGATAAAAATGACAAGGAAGAAGCATAGGTACATAGACAAATGA
____________________________________________________________
consensus AGAGGTACACCATAGTTGATAAAAATGACAAGGAAGAAGCATAGGTACATAGACAAATGA
. : . : . : . : . : . :
JMFS082C01+ AGTAAGTCTCGGATAAGTTCTAAGTAGAATGTGTAGACAGCCTTTCTCTCCCACTGTCCT
____________________________________________________________
consensus AGTAAGTCTCGGATAAGTTCTAAGTAGAATGTGTAGACAGCCTTTCTCTCCCACTGTCCT
. : . : . : . : . : . :
JMFS082C01+ TCCATAAGCATGTCACTAACATAGAATATATATTTCACAAATGTTGACACAGTAGCTGTT
____________________________________________________________
consensus TCCATAAGCATGTCACTAACATAGAATATATATTTCACAAATGTTGACACAGTAGCTGTT
. : . : . : . : . : . :
JMFS082C01+ GCAAGGATCATGTACTCAAATGAAAAGAAGAGAGAAACCGAAGCCTGTCTTGTCTGTATC
JMFS127D04+ TGTATC
JMSF025D21+ TGTATC
____________________________________________________________
consensus GCAAGGATCATGTACTCAAATGAAAAGAAGAGAGAAACCGAAGCCTGTCTTGTCTGTATC
. : . : . : . : . : . :
JMFS082C01+ AAGTAGTTTACGGAGTTGTACAAAAAGAGACTATCTATAAAGAGGAGAAATCCCATGAAG
JMFS127D04+ AAGTAGTTTACGGAGTTGTACAAAAAGAGACTATCTATAAAGAGGAGAAATCCCATGAAG
JMSF025D21+ AAGTAGTTTACGGAGTTGTACAAAAAGAGACTATCTATAAAGAGGAGAAATCCCATGAAG
____________________________________________________________
consensus AAGTAGTTTACGGAGTTGTACAAAAAGAGACTATCTATAAAGAGGAGAAATCCCATGAAG
. : . : . : . : . : . :
JMFS082C01+ GAGACAATGCGAATGTGGGACAACAAAGGAACTGTTGGGGTTGTTTCAATGTATTCAACT
JMFS127D04+ GAGACAATGCGAATGTGGGACAACAAAGGAACTGTTGGGGTTGTTTCAATGTATTCAACT
JMSF025D21+ GAGACAATGCGAATGTGGGACAACAAAGGAACTGTTGGGGTTGTTTCAATGTATTCAACT
JMFF008C24+ GGAACTGTTGGGGTTGTTTCAATGTATTCAACT
____________________________________________________________
consensus GAGACAATGCGAATGTGGGACAACAAAGGAACTGTTGGGGTTGTTTCAATGTATTCAACT
. : . : . : . : . : . :
JMFS082C01+ CTCTTCTGAGCCAACCAATGCAAAGCCTTGA
JMFS127D04+ CTCTTCTGAGCCAACCAATGCAAAGCCTTGATAAGCAGAAGTGTAGTAACCATAGCAAGA
JMSF025D21+ CTCTTCTGAGCCAACCAATGCAAAGCCTTGATAAGCAGAAGTGTAGTAACCATAGCAAGA
JMFF008C24+ CTCTTCTGAGCCAACCAATGCAAAGCCTTGATAAGCAGAAGTGTAGTAACCATAGCAAGA
JMFF012F12+ ACCAATGCAAAGCCTTGATAAGCAGAAGTGTAGTAACCATAGCAAGA
____________________________________________________________
consensus CTCTTCTGAGCCAACCAATGCAAAGCCTTGATAAGCAGAAGTGTAGTAACCATAGCAAGA
. : . : . : . : . : . :
JMFS127D04+ AAAGTAACTGAAAAGTCTTGTCGGAAGATTGTGATGGCGAAAAGTATTTCCATGACTTCC
JMSF025D21+ AAAGTAACTGAAAAGTCTTGTCGGAAGATTGTGATGGCGAAAAGTATTTCCATGACTTCC
JMFF008C24+ AAAGTAACTGAAAAGTCTTGTCGGAAGATTGTGATGGCGAAAAGTATTTCCATGACTTCC
JMFF012F12+ AAAGTAACTGAAAAGTNTTGTCGGAAGATTGTGATGGCGAAAAGTATTTCCATGACTTCC
____________________________________________________________
consensus AAAGTAACTGAAAAGTCTTGTCGGAAGATTGTGATGGCGAAAAGTATTTCCATGACTTCC
. : . : . : . : . : . :
JMFS127D04+ CGCCATGACTGCTCATTGAGCCTCTCAACCTCCGCCTCCCGAAGGGAACCAAGGAATATT
JMSF025D21+ CGCCATGACTGCTCATTGAGCCTCTCAACCTCCGCCTCCCGAAGGGAACCAAGGAATATT
JMFF008C24+ CGCCATGACTGCTCATTGAGCCTCTCAACCTCCGCCTCCCGAAGGGAACCAAGGAATATT
JMFF012F12+ CGCCATGACTGCTCATTGAGCCTNTCAACCTCCGCCTCCCGAAGGGAACCAAGGAATATT
____________________________________________________________
consensus CGCCATGACTGCTCATTGAGCCTCTCAACCTCCGCCTCCCGAAGGGAACCAAGGAATATT
. : . : . : . : . : . :
JMFS127D04+ TTCTTTGTTAATTGCCACAAAATGCACATAAGGACCAGACCCATGTTAAGCAGAACCACC
JMSF025D21+ TTCTTTGTTAATTGCCACAAAATGCACATAAGGACCAGACCCATGTTAAGCAGAACCACC
JMFF008C24+ TTCTTTGTTAATTGCCACAAAATGCACATAAGGACCAGACCCATGTTAAGCAGAACCACC
JMFF012F12+ TTNTTTGTTAATTGCCACAAAATGCACATAAGGACCAGACCCATGTTAAGCAGAACCNCC
____________________________________________________________
consensus TTCTTTGTTAATTGCCACAAAATGCACATAAGGACCAGACCCATGTTAAGCAGAACCACC
. : . : . : . : . : . :
JMFS127D04+ AGACAGATCTTCGAGGTTGATAAGTAAACCGTTGCTGGGTAAAATTGGCCTCTACTATTG
JMSF025D21+ AGACAGATCTTCGAGGTTGATAAGTAAACCGTTGCTGGGTAAAATTGGCCTCTACTATTG
JMFF008C24+ AGACAGATCTTCGAGGTTGATAAGTAAACCGTTGCTGGGTAAAATTGGCCTCTACTATTG
JMFF012F12+ AGACAGATNTTCGAGGTTGATAAGTAAACCGTTGCTGGGTAAAATTGGCCTNTACTATTG
____________________________________________________________
consensus AGACAGATCTTCGAGGTTGATAAGTAAACCGTTGCTGGGTAAAATTGGCCTCTACTATTG
. : . : . : . : . : . :
JMFS127D04+ AAAGCATGGTAAATAACAGCCAGTGTGGCTATTAGACTAAGCCCTGCATATGTTTGCAGC
JMSF025D21+ AAAGCATGGTAAATAACAGCCAGTGTGGCTATTAGACTAAGCCCTGCATATGTTTGCAGC
JMFF008C24+ AAAGCATGGTAAATAACAGCCAGTGTGGCTATTAGACCAAGCCCTGCATATGTTTGCAGC
JMFF012F12+ AAAGCATGGTAAATAACAGCCAGTGTGGCTATTAGACTAAGCCCTGCATATGTTTGCAGC
____________________________________________________________
consensus AAAGCATGGTAAATAACAGCCAGTGTGGCTATTAGACTAAGCCCTGCATATGTTTGCAGC
. : . : . : . : . : . :
JMFS127D04+ CTCAAAATTTTCCCTTGGCTCCTCTATGCACCGGGGATAGATGGCGGAGCTGACTCGAAG
JMSF025D21+ CTCAACATTTTCCCTTGGCTCCTCTATGCACCGGGGATAGATGGCGGAGCTGACTCGAAG
JMFF008C24+ CTCAACATTTTCCCTTGGCTCCTCTATGCACCGGGGATAGATGGCGGAGCTGACTCGAAG
JMFF012F12+ CTCAACATTTTCCCTTGGCTCCTNTATGCACCGGGGATAGATGGCGGAGCTGACTCGAAG
____________________________________________________________
consensus CTCAACATTTTCCCTTGGCTCCTCTATGCACCGGGGATAGATGGCGGAGCTGACTCGAAG
. : . : . : . : . : . :
JMFS127D04+ TTGTTAACAATCGCGGGAAGGCGATTGCTGGAGAGTTGAAACAAAAGATTTGATGAGGAT
JMSF025D21+ TTGTTAACAATCGCGGGAAGGCGATTGCTGGAGAGTTGAAACAAAAGATTTGATGAGGAT
JMFF008C24+ TTGTTAACAATCGCGGGAAGGCGATTGCTGGAGAGTTGAAACAAAAGATTTGATGAGGAT
JMFF012F12+ TTGTTAACAATCGCGGGAAGGCGATTGCTGGAGAGTTGAAACAAAAGATTTGATGAGGAT
____________________________________________________________
consensus TTGTTAACAATCGCGGGAAGGCGATTGCTGGAGAGTTGAAACAAAAGATTTGATGAGGAT
. : . : . : . : . : . :
JMFS127D04+ AACCAGA
JMSF025D21+ AACCAGACAAACGAAATCAGCTCTCAATTTGATT
JMFF008C24+ AACCAGACAAACGAAATCAGCTCTCAATTTGATTGAACTGGGAAGAAAATTCGAAGAAAT
JMFF012F12+ AACCAGACAAACGAAATCAGCTNTCAATTTGATTGAACTGGGAAGAAAATTCGAAGAAAT
____________________________________________________________
consensus AACCAGACAAACGAAATCAGCTCTCAATTTGATTGAACTGGGAAGAAAATTCGAAGAAAT