| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011D16 | Sequence | 545 | 008752 (6) | 724 | 008752 (6) | ref|XP_009630290.1| | 188 | PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis] | |||
| JMSF009N17 | Sequence | 334 | 008752 (6) | 731 | 023455 | ref|XP_006339907.1| | 1e-70 | PREDICTED: B3 domain-containing protein Os01g0234100-like [Solanum tuberosum] | |||
| JMSF013N24 | Sequence | 260 | 007814 (2) | 743 | 008752 (6) | ref|XP_009630290.1| | 234 | PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis] | |||
| JMSF031F14 | Sequence | 631 | 007814 (2) | ref|XP_009630290.1| | 203 | PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis] | 702 | 008752 (6) | ref|XP_009630290.1| | 206 | PREDICTED: uncharacterized protein LOC104120259 [Nicotiana tomentosiformis] |
| JMSF036E13 | Sequence | 679 | 008752 (6) | emb|CDP02488.1| | 2e-27 | unnamed protein product [Coffea canephora] | 226 | 001428 (3) | |||
This contig is upended
. : . : . : . : . : . :
rJMSF031F14- GATAGTTTCATTATACAAAGTACAAACTAAACAATGCAGTTGACAACAGTA
rJMSF013N24- GATAGTTTCATTATACAAAGTACAAACTAAACAATGCAGTTGACAACAGTA
____________________________________________________________
consensus GATAGTTTCATTATACAAAGTACAAACTAAACAATGCAGTTGACAACAGTA
. : . : . : . : . : . :
rJMSF031F14- CAGAAGCTACACCTCTACAATCTTCAAACTACTGACCACAAAACCACCCAATCTGTTCTG
rJMSF013N24- CAGAAGCTACACCTCTACAATCTTCAAACTACTGACCACAAAACCACCCAATCTGTTCTG
____________________________________________________________
consensus CAGAAGCTACACCTCTACAATCTTCAAACTACTGACCACAAAACCACCCAATCTGTTCTG
. : . : . : . : . : . :
rJMSF031F14- TTCAACACAACAGATTCATTAGAGATAAAGAATTTCTTCTACTGAACAGTTAACAAAACA
rJMSF013N24- TTCAACACAACAGATTCATTAGAGATAAAGAATTTCTTCTACTGAACAGTTAACAAAACA
____________________________________________________________
consensus TTCAACACAACAGATTCATTAGAGATAAAGAATTTCTTCTACTGAACAGTTAACAAAACA
. : . : . : . : . : . :
rJMSF031F14- AATGCTCCAGATGTCTCTCTCTGTCTGTCTGTGCTTGCAGAATGATGAAATCAGAGCTTT
rJMSF013N24- AATGCTCCAGATGTCTCTCTCTGTCTGTCTGTGCTTGCAGAATGATGAAATCAGAGCTTT
____________________________________________________________
consensus AATGCTCCAGATGTCTCTCTCTGTCTGTCTGTGCTTGCAGAATGATGAAATCAGAGCTTT
. : . : . : . : . : . :
rJMSF031F14- TGCTGAATTTGCTGTACACAATTATTTTGTAATGCCAAAGGATTTTATTTCATTAAATCT
rJMSF013N24- TGCTGAATTTGCTGTACACAATTATTTTGTAATGCCAAAGGATTTTATTTCATTAAATCT
rJMFF011D16- TTTATTTCATTAAATCT
____________________________________________________________
consensus TGCTGAATTTGCTGTACACAATTATTTTGTAATGCCAAAGGATTTTATTTCATTAAATCT
. : . : . : . : . : . :
rJMSF031F14- ATGAATACAAAGCCATTCCACAGACTGTGCAATAGTATCGACGGGAGGAGGTTCCTAGAC
rJMSF013N24- ATGAATACAAAGCCATTCCACAGACTGTGCAATAGTATCGACGGGAGGAGGTTCCTAGAC
rJMFF011D16- ATGAATACAAAGCCATTCCACAGACTGTGCAATAGTATCGACGGGAGGAGGTTCCTAGAC
____________________________________________________________
consensus ATGAATACAAAGCCATTCCACAGACTGTGCAATAGTATCGACGGGAGGAGGTTCCTAGAC
. : . : . : . : . : . :
rJMSF031F14- CTAGCGTATATTATCCCCATGACGACCCCCAGAAATATTAGCGGTAACATCCTCTGTACA
rJMSF013N24- CTAGCGTATATTATCCCCATGACGACCCCCAGAAATATTAGCGGTAACATCCTCTGTACA
rJMFF011D16- CTAGCGTATATTATCCCCATGACGACCCCCAGAAATATTAGCGGTAACATCCTCTGTACA
____________________________________________________________
consensus CTAGCGTATATTATCCCCATGACGACCCCCAGAAATATTAGCGGTAACATCCTCTGTACA
. : . : . : . : . : . :
rJMSF031F14- TTAAAATGCGCTAAAGCAAACGCGACTGAACTCACGAGAATTGAACACCATACAGGCATG
rJMSF013N24- TTAAAATGCGCTAAAGCAAACGCGACTGAACTCACGAGAATTGAACACCATACAGGCATG
rJMFF011D16- TTAAAATGCGCTAAAGCAAACGCGACTGAACTCACGAGAATTGAACACCATACAGGCATG
____________________________________________________________
consensus TTAAAATGCGCTAAAGCAAACGCGACTGAACTCACGAGAATTGAACACCATACAGGCATG
. : . : . : . : . : . :
rJMSF031F14- TACTTTGTCAAAGAAGGAAGAAGGAAGCCCCTAAATACAATCTCTTCCCACATCGGAGCA
rJMSF013N24- TACTTTGTCAAAGAAGGAAGAAGGAAGCCCCTAAATACAATCTCTTCCCACATCGGAGCA
rJMFF011D16- TACTTTGTCAAAGAAGGAAGAAGGAAGCCCCTAAATACAATCTCTTCCCACATCGGAGCA
____________________________________________________________
consensus TACTTTGTCAAAGAAGGAAGAAGGAAGCCCCTAAATACAATCTCTTCCCACATCGGAGCA
. : . : . : . : . : . :
rJMSF031F14- CACACGACCAGTACTAGTGCGTAGAGCGCCATAGCCACCGGATCTCGCGCCAGTATCGAC
rJMSF013N24- CACACGACCAGTACTAGTGCGTAGAGCGCCATAGCCACCGGATCTCGCGCCAGTATCGAC
rJMFF011D16- CACACGACCAGTACTAGTGCGTAGAGCGCCATAGCCACCGGATCTCGCGCCAGTATCGAC
____________________________________________________________
consensus CACACGACCAGTACTAGTGCGTAGAGCGCCATAGCCACCGGATCTCGCGCCAGTATCGAC
. : . : . : . : . : . :
rJMSF031F14- TGCTCGACGCTGGAGAGCGTGAC
rJMSF013N24- TGCTCGACGCTGGAGAGCGTGAC
rJMFF011D16- TGCTCGACGCTGGAGAGCGTGACTAATTGGAAAATCAAGACATCTCCTTCTAACAAAGTG
____________________________________________________________
consensus TGCTCGACGCTGGAGAGCGTGACTAATTGGAAAATCAAGACATCTCCTTCTAACAAAGTG
. : . : . : . : . : . :
rJMFF011D16- TGAGCAGCAACGAATTTCCTCCAACCTGCACTAAGTCCCGTCTTCCCTGCAAGATATTTG
____________________________________________________________
consensus TGAGCAGCAACGAATTTCCTCCAACCTGCACTAAGTCCCGTCTTCCCTGCAAGATATTTG
. : . : . : . : . : . :
rJMFF011D16- ACGCTAAATTCTTCCCCACTTTCGTTCTCGAGGACGAGTGTAGTGTCAGTCCTGGACAGA
JMSF036E13+ GGACGAGTGTAGTGTCAGTCCTGGACAGA
____________________________________________________________
consensus ACGCTAAATTCTTCCCCACTTTCGTTCTCGAGGACGAGTGTAGTGTCAGTCCTGGACAGA
. : . : . : . : . : . :
rJMFF011D16- TGTTTCTTACAGAACGGAACAGGGAAGCCCATCCAAAAGCAACTACCAACGTGTGATCTA
JMSF036E13+ TGTTTCTTACAGAACGGAACAGGGAAGCCCATCCAAAAGCAACTACCAACGTGTGATCTA
____________________________________________________________
consensus TGTTTCTTACAGAACGGAACAGGGAAGCCCATCCAAAAGCAACTACCAACGTGTGATCTA
. : . : . : . : . : . :
rJMFF011D16- ACTAACAGTTTCAAGAAGGTTGGATATTCCTCCCCTAGGCTTGACTGAACCTCCTCTGCA
JMSF036E13+ ACTAACAGTTTCAAGAAGGTTGGATATTCCTCCCCTAGGCTTGACTGAACCTCCTCTGCA
JMFF011D16+ CTGCA
____________________________________________________________
consensus ACTAACAGTTTCAAGAAGGTTGGATATTCCTCCCCTAGGCTTGACTGAACCTCCTCTGCA
. : . : . : . : . : . :
rJMFF011D16- CAAATCAGGGTTGGTGACTTCACTTGGAGATGATTGCTGGACCGAAAACTCGAATTTGCA
JMSF036E13+ CAAATCAGGGTTGGTGACTTCACTTGGAGATGATTGCTGGACCGAAAACTCGAATTTGCA
JMFF011D16+ CAAATCAGGGTTGGTGACTTCACTTGGAGATGATTGCTGGACCGAAAACTCGAATTTGCA
____________________________________________________________
consensus CAAATCAGGGTTGGTGACTTCACTTGGAGATGATTGCTGGACCGAAAACTCGAATTTGCA
. : . : . : . : . : . :
rJMFF011D16- GTGCCTGGAGACTTTCCCTTGTAATCATCCACTTCATGGTTGAATTG
JMSF036E13+ GTGCCTGGAGACTTTCCCTTGTAATCATCCACTTCATGGTTGAATTGAGAACCAGGGGGC
JMFF011D16+ GTGCCTGGAGACTTTCCCTTGTAATCATCCACTTCATGGTTGAATTGAGAACCAGGGGGC
____________________________________________________________
consensus GTGCCTGGAGACTTTCCCTTGTAATCATCCACTTCATGGTTGAATTGAGAACCAGGGGGC
. : . : . : . : . : . :
JMSF036E13+ CGGGGCCTCTTCTTCCTCTTCCTGATGAAAAGCAATGGCGAAAACTCATCCATCACCCCC
JMFF011D16+ CGGGGCCTCTTCTTCCTCTTCCTGATGAAAAACAATGGCGAAAACTCATCCATCACCCCC
____________________________________________________________
consensus CGGGGCCTCTTCTTCCTCTTCCTGATGAAAAGCAATGGCGAAAACTCATCCATCACCCCC
. : . : . : . : . : . :
JMSF036E13+ TTCGCCTTCCTCTTCCTCTTTCCAGGAGAGGGCGCTGGAGCGTGGTCGGAGATGGGTAAA
JMSF009N17+ TCTTTCCAGGAGAGGGCGCTGGAGCGTGGTCGGAGATGGGTAAA
JMFF011D16+ TTCGCCTTCCTCTTCCTCTTTCCAGGAGAGGGCGCTGGAGCGTGGTCGGAGATGGGTAAA
____________________________________________________________
consensus TTCGCCTTCCTCTTCCTCTTTCCAGGAGAGGGCGCTGGAGCGTGGTCGGAGATGGGTAAA
. : . : . : . : . : . :
JMSF036E13+ CTAACAAGACTCAAATTCCCTTCATTGCCAGGCCTTCCAGCTTCTTCTTCTTCTTCTTCT
JMSF009N17+ CTAACAAGACTCAAATTCCCTTCATTGCCAGGCCTTCCAGCTTCTTCTTCTTCTTCTTCT
JMFF011D16+ CTAACAAGACTCAAATTCCCTTCATTGCCAGGCCTTCCAGCTTCTTCTTCTTCTTCTTCT
____________________________________________________________
consensus CTAACAAGACTCAAATTCCCTTCATTGCCAGGCCTTCCAGCTTCTTCTTCTTCTTCTTCT
. : . : . : . : . : . :
JMSF036E13+ TCTTCTTCTTCCTCCTCCATAATTTCCTCCTTGGGCACATCCAGGTCGCCGAGATTTTCT
JMSF009N17+ TCTTCTTCTTCCTCCTCCATAATTTCCTCCTTGGGCACATCCAGGTCGCCGAGATTTTCT
JMFF011D16+ TCTTCTTCTTCCTCCTCCATAATTTCCTCCTTGGGCACATCCAGGTCGCCGAGATTTTCT
____________________________________________________________
consensus TCTTCTTCTTCCTCCTCCATAATTTCCTCCTTGGGCACATCCAGGTCGCCGAGATTTTCT
. : . : . : . : . : . :
JMSF036E13+ TGATTCAGAACCACCTTCAGTTTCATCGCTCCCCCTTTAAGCTTAATCTGAAGAAAGATT
JMSF009N17+ TGATTCAGAACCACCTTCAGTTTCATCGCTCCCCCTTTAAGCTTAATCTGAAGAAAGATT
JMFF011D16+ TGATTCAGAACCACCTTCAGTTTCATCGCTCCCCCTTTAAGCTTAATCTGAAGAAAGATT
____________________________________________________________
consensus TGATTCAGAACCACCTTCAGTTTCATCGCTCCCCCTTTAAGCTTAATCTGAAGAAAGATT
. : . : . : . : . : . :
JMSF036E13+ GGTCGCTAGATTTTGGAAGTCTAAGTTGAAAGGTGGGAAAACATTAAAGAAAAGTCGGCA
JMSF009N17+ GGTCGCTAGATTTTGGAAGTCTAAGTTGAAAGGTGGGAAAACATTAAAGAAAAGTCGGCA
JMFF011D16+ GGTCGCTAGATTTTGGAAGTCTAAGTTGAAAGGTGGGAAAACATTAAAGAAAAGTCGGCA
____________________________________________________________
consensus GGTCGCTAGATTTTGGAAGTCTAAGTTGAAAGGTGGGAAAACATTAAAGAAAAGTCGGCA
. : . : . : . : . : . :
JMSF036E13+ AAATGGAAATTGCCGCTCCCCGATTCCAAGTCCAGGAGGGTGCTCTC
JMSF009N17+ AAATGGAAATTGCCGCTCCCCGATTCCAAGTCCAGGAGGGTGCTCTC
JMFF011D16+ AAATGGAAATTGCCGCTCCCCGATTCCAAGTCCAGGAGGGTGCTCTCCTGGAAAACTTTT
____________________________________________________________
consensus AAATGGAAATTGCCGCTCCCCGATTCCAAGTCCAGGAGGGTGCTCTCCTGGAAAACTTTT