| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005I02 | Sequence | 446 | 008751 (5) | ref|XP_009346323.1| | 7e-40 | PREDICTED: dnaJ homolog subfamily B member 4-like [Pyrus x bretschneideri] ref|X | 469 | 006787 (6) | ref|XP_004302588.1| | 9e-18 | PREDICTED: dnaJ homolog subfamily B member 13 [Fragaria vesca subsp. vesca] |
| JMFF006N05 | Sequence | 528 | 008751 (5) | ref|XP_004246761.1| | 5e-63 | PREDICTED: dnaJ homolog subfamily B member 13 [Solanum lycopersicum] | 808 | 006787 (6) | ref|XP_009598062.1| | 2e-96 | PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis] |
| JMFF010O03 | Sequence | 573 | 008751 (5) | ref|XP_006365599.1| | 1e-59 | PREDICTED: dnaJ homolog subfamily B member 4-like [Solanum tuberosum] | 770 | 006787 (6) | ref|XP_009598062.1| | 7e-104 | PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis] |
| JMFF027C21 | Sequence | 531 | 008751 (5) | ref|XP_006365599.1| | 5e-63 | PREDICTED: dnaJ homolog subfamily B member 4-like [Solanum tuberosum] | 756 | 006787 (6) | ref|XP_009598062.1| | 3e-96 | PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis] |
| JMSF017O01 | Sequence | 395 | 008751 (5) | gb|KDP24444.1| | 4e-44 | hypothetical protein JCGZ_25008 [Jatropha curcas] | 500 | 006787 (6) | ref|XP_009598062.1| | 4e-24 | PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF006N05+ TGCGACATTCCTAAATTGAGCAAACATATCATCCCCAAACACACCACCG
JMFF027C21+ TGCGACATTCCTAAATTGAGCAAACATATCATCCCCAAACACACCACCG
JMFF010O03+ TTGAGCAAACATATCATCCCCAAACACACCACCG
____________________________________________________________
consensus TGCGACATTCCTAAATTGAGCAAACATATCATCCCCAAACACACCACCG
. : . : . : . : . : . :
JMFF006N05+ CGAGAAAAGTTAGTTCCGCCATGACGGGGACCCATGTCCCCCATTCCTCCAAAAGGGCTA
JMFF005I02+ CCATGTCCCCCATTCCTCCAAAAGGGCTA
JMFF027C21+ CGAGAAAAGTTAGTTCCGCCATGACGGGGACCCATGTCCCCCATTCCTCCAAAAGGGCTA
JMFF010O03+ CGAGAAAAGTTAGTTCCGCCATGACGGGGACCCATGTCCCCCATTCCTCCAAAAGGGCTA
____________________________________________________________
consensus CGAGAAAAGTTAGTTCCGCCATGACGGGGACCCATGTCCCCCATTCCTCCAAAAGGGCTA
. : . : . : . : . : . :
JMFF006N05+ GTAAACCCAAAAAACTCGGAGAATATATCATCAGGGTTACGAGGGTTGAATCGGAA-GGA
JMFF005I02+ GTAAACCCAAAAAACTCGGAGAATATATCATCAGGGTTACGAGGGTTGAATCGGAA-GGA
JMSF017O01+ TCATCAGGGTTACGAGGGNTGAATCGGAANGGA
JMFF027C21+ GTAAACCCAAAAAACTCGGAGAATATATCATCAGGGTTACGAGGGTTGAATCGGAA-GGA
JMFF010O03+ GTAAACCCAAAAAACTCGGAGAATATATCATCAGGGTTACGAGGGTTGAATCGGAA-GGA
____________________________________________________________
consensus GTAAACCCAAAAAACTCGGAGAATATATCATCAGGGTTACGAGGGTTGAATCGGAA-GGA
. : . : . : . : . : . :
JMFF006N05+ GGCGTGAGCAGCATCAGACGAGCTGGGAAAACCTCCGGTCCCGGGAGGTGTGAATTGACC
JMFF005I02+ GGCGTGAGCAGCATCAGACGAGCTGGGAAAACCTCCGGTCCCGGGAGGTGTGAATTGACC
JMSF017O01+ GGCGTGAGCAGCATCAGACGAGCTGGGAAAACCTCCGGTCCCGGGAGGTGTGAATTGACC
JMFF027C21+ GGCGTGAGCAGCATCAGACGAGCTGGGAAAACCTCCGGTCCCGGGAGGTGTGAATTGACC
JMFF010O03+ GGCGTGAGCAGCATCAGACGAGCTGGGAAAACCTCCGGTCCCGGGAGGTGTGAATTGACC
____________________________________________________________
consensus GGCGTGAGCAGCATCAGACGAGCTGGGAAAACCTCCGGTCCCGGGAGGTGTGAATTGACC
. : . : . : . : . : . :
JMFF006N05+ CTTCAAACCTTCTTCCCCGTACTGATCATAAACTGCCCTCTTCTGTGGATCACTCAGCAC
JMFF005I02+ CTTCAAACCTTCTTCCCCGTACTGATCATAAACTGCCCTCTTCTGTGGATCACTCAGCAC
JMSF017O01+ CTTCAAACCTTCTTCCCCGTACTGATCATAAACTGCCCTCTTCTGTGGATCACTCAGCAC
JMFF027C21+ CTTCAAACCTTCTTCCCCGTACTGATCATAAACTGCCCTCTTCTGTGGATCACTCAGCAC
JMFF010O03+ CTTCAAACCTTCTTCCCCGTACTGATCATAAACTGCCCTCTTCTGTGGATCACTCAGCAC
____________________________________________________________
consensus CTTCAAACCTTCTTCCCCGTACTGATCATAAACTGCCCTCTTCTGTGGATCACTCAGCAC
. : . : . : . : . : . :
JMFF006N05+ GTCGTAGGCTTCGGAGATTTGTTTGAATTTGGCTTCAGCTTCTCGCTTGTTCTTAGGGTT
JMFF005I02+ GTCGTAGGCTTCGGAGATTTGTTTGAATTTGGCTTCAGC-TCTCGCTTGTTCTTAGGGTT
JMSF017O01+ GTCGTAGGCTTCGGAGATTTGTTTGAATTTGGCTTCAGCTTCTCGCTTGTTCTTAGGGTT
JMFF027C21+ GTCGTAGGCTTCGGAGATTTGTTTGAATTTGGCTTCAGCTTCTCGCTTGTTCTTAGGGTT
JMFF010O03+ GTCGTAGGCTTCGGAGATTTGTTTGAATTTGGCTTCAGCTTCTCGCTTGTTCTTAGGGTT
____________________________________________________________
consensus GTCGTAGGCTTCGGAGATTTGTTTGAATTTGGCTTCAGCTTCTCGCTTGTTCTTAGGGTT
. : . : . : . : . : . :
JMFF006N05+ TTTGTCAGGGTGCCACTTCATGGCGAGCTTGCGGTAAGCTTTCTTGAGATCATCGTCTTT
JMFF005I02+ TTTGTCAGGGTGCCACTTCATGGCGAGCTTGCGGTAAGCTTTCTTGAGATCATCGTCTTT
JMSF017O01+ TTTGTCAGGGTGCCACTTCATGGCGAGCTTGCGGTAAGCTTTCTTGAGATCATCGTCTTT
JMFF027C21+ TTTGTCAGGGTGCCACTTCATGGCGAGCTTGCGGTAAGCTTTCTTGAGATCATCGTCTTT
JMFF010O03+ TTTGTCAGGGTGCCACTTCATGGCGAGCTTGCGGTAAGCTTTCTTGAGATCATCGTCTTT
____________________________________________________________
consensus TTTGTCAGGGTGCCACTTCATGGCGAGCTTGCGGTAAGCTTTCTTGAGATCATCGTCTTT
. : . : . : . : . : . :
JMFF006N05+ GGCGGTGCGGTCCACCTGAAGAATCTTGTAGTAGTCCACGCCCATTACCTTCTCCCTTTC
JMFF005I02+ GGCGGTGCGGTCCACCTGAAGAATCTTGTAGTAGTCCACGCCCATTACCTTCTCCCTTTC
JMSF017O01+ GGCGGTGCGGTCCACCTGAAGAATCTTGTAGTAGTCCACGCCCATTACCTTCTCCCTTTC
JMFF027C21+ GGCGGTGCGGTCCACCTGAAGAATCTTGTAGTAGTCCACGCCCATTACCTTCTCCCTTTC
JMFF010O03+ GGCGGTGCGGTCCACCTGAAGAATCTTGTAGTAGTCCACGCCCATTACCTTCTCCCTTTC
____________________________________________________________
consensus GGCGGTGCGGTCCACCTGAAGAATCTTGTAGTAGTCCACGCCCATTACCTTCTCCCTTTC
. : . : . : . : . : . :
JMFF006N05+ TCTCTTCCTCCGGCTTGGCCTTGGCTTCTCCACCGTGACTTCTTTCTTATCTTTCCCC
JMFF005I02+ TCTCTTCCTCCGGCTTGGCCTTGGCTTCTCCACCGTGACTTCTTTCTTCTCTTTCCCC
JMSF017O01+ TCTCTTCCTCCGGCTTGGCCTTGGCTTCTCCACCGTGACTTCTTTCTTCTCTTTCCCC
JMFF027C21+ TCTCTTCCTCCGGCTTGGCCTTGGCTTCTCCACCGTGACTTCTTTCTTCTCTTTCCCC
JMFF010O03+ TCTCTTCCTCCGGCTTGGCCTTGGCTTCTCCACCGTGACTTCTTTCTTCTCTTTCCCCTT
____________________________________________________________
consensus TCTCTTCCTCCGGCTTGGCCTTGGCTTCTCCACCGTGACTTCTTTCTTCTCTTTCCCCTT
. : . : . : . : . : . :
JMFF010O03+ CTTCCCTCTCACACAGCTCTTCTCTTTTTTATACATTTCACTGAACCAGGTGAACAAAAC
____________________________________________________________
consensus CTTCCCTCTCACACAGCTCTTCTCTTTTTTATACATTTCACTGAACCAGGTGAACAAAAC