Contig 008745:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-                                                                AACTTT
                      ____________________________________________________________
consensus                                                                   AACTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          TTGCCTGAACTTTTTCATCAAATACTAAGCAGAGGCATCTCAAGTAACATAATTTAGTCA
                      ____________________________________________________________
consensus             TTGCCTGAACTTTTTCATCAAATACTAAGCAGAGGCATCTCAAGTAACATAATTTAGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          TAACTGCATTGTAGCATCAAGCTTAAAAGTTACTCCCTAACATATAGCTAAGCTCCTCCA
                      ____________________________________________________________
consensus             TAACTGCATTGTAGCATCAAGCTTAAAAGTTACTCCCTAACATATAGCTAAGCTCCTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          TATAACAATAATTATCTTCATACCAAAGATGCTTTTAATCTAGACTAGGCAGAATCACCA
JMFN006J03+                                                               AATCACCA
JMFF008A13+                                                               AATCACCA
                      ____________________________________________________________
consensus             TATAACAATAATTATCTTCATACCAAAGATGCTTTTAATCTAGACTAGGCAGAATCACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          TAGATTTCCGAGTGTAATATCATTAAGAACCCCATAGACTCCATTTACAAAAGAAGATAC
JMFN006J03+           TAGATTTCCGAGTGTAATATCATTAAGAACCCCATAGACTCCATTTACAAAAGAAGATAC
JMFF008A13+           TAGATTTCCGAGTGTAATATCATTAAGAACCCCATAGACTCCATTTACAAAAGAAGATAC
                      ____________________________________________________________
consensus             TAGATTTCCGAGTGTAATATCATTAAGAACCCCATAGACTCCATTTACAAAAGAAGATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          AGAGGCAAATAAACAGGGGGGAAACAAAAAAGAAGCCATTCTTTCTCAATAGCGAATAAT
JMFN006J03+           AGAGGCAAATAAACAGGGGGGAAACAAAAAAGAAGCCATTCTTTCTCAATAGCGAATAAT
JMFF008A13+           AGAGGCAAATAAACAGGGGGGAAACAAAAAAGAAGCCATTCTTTCTCAATAGCGAATAAT
                      ____________________________________________________________
consensus             AGAGGCAAATAAACAGGGGGGAAACAAAAAAGAAGCCATTCTTTCTCAATAGCGAATAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          CACTTAAGAAAGTGAGGAGAAATCAAGCCAGCAATCTCAAGGAACCCAATACGATCCTTT
JMFN006J03+           CACTTAAGAAAGTGAGGAGAAATCAAGCCAGCAATCTCAAGGAACCCAATACGATCCTTT
JMFF008A13+           CACTTAAGAAAGTGAGGAGAAATCAAGCCAGCAATCTCAAGGAACCCAATACGATCCTTT
                      ____________________________________________________________
consensus             CACTTAAGAAAGTGAGGAGAAATCAAGCCAGCAATCTCAAGGAACCCAATACGATCCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          CCAGCAAAAATTTTCTTCAGCTTCTCATCGCACACTATGACCTTTTTGTTTGCAGGATCC
JMFN006J03+           CCAGCAAAAATTTTCTTCAGCTTCTCATCGCACACTATGACCTTTTTGTTTGCAGGATCC
JMFF008A13+           CCAGCAAAAATTTTCTTCAGCTTCTCATCGCACACTATGACCTTTTTGTTTGCAGGATCC
                      ____________________________________________________________
consensus             CCAGCAAAAATTTTCTTCAGCTTCTCATCGCACACTATGACCTTTTTGTTTGCAGGATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          TGAAGGTTGTTCTGTTTGATGTAAGCCCAAATCTCCTTAAGCACTTGAGTGCGAGGAATC
JMFN006J03+           TGAAGGTTGTTCTGTTTGATGTAAGCCCAAATCTCCTTAAGCACTTGAGTGCGAGGAATC
JMFF008A13+           TGAAGGTTGTTCTGTTTGATGTAAGCCCAAATCTCCTTAAGCACTTGAGTGCGAGGAATC
                      ____________________________________________________________
consensus             TGAAGGTTGTTCTGTTTGATGTAAGCCCAAATCTCCTTAAGCACTTGAGTGCGAGGAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          TCAGAGACGCCGCCGAGGAACGCCTGCATTTCCGGCGAGACTCGGCGCGGTTTCATGATG
JMFN006J03+           TCAGAGACGCCGCCGAGGAACGCCTGCATTTCCGGCGAGACTCGGCGCGGTTTCATGATG
JMFF008A13+           TCAGAGACGCCGCCGAGGAACGCCTGCATTTCCGGCGAGACTCGGCGCGGTTTCATGATG
                      ____________________________________________________________
consensus             TCAGAGACGCCGCCGAGGAACGCCTGCATTTCCGGCGAGACTCGGCGCGGTTTCATGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          CCACGGCCGGCTTGCTTCTTCGTTTCCGTAGCTTGCTCGGAAGAGGCAACAACCGTCAAC
JMFN006J03+           CCACGGCCGGCTTGCTTCTTCGTTTCCGTAGCTTGCTCGGAAGAGGCAACAACCGTCAAC
JMFF008A13+           CCACGGCCGGCTTGCTTCTTCGTTTCCGTAGCTTGCTCGGAAGAGGCAACAACCGTCAAC
                      ____________________________________________________________
consensus             CCACGGCCGGCTTGCTTCTTCGTTTCCGTAGCTTGCTCGGAAGAGGCAACAACCGTCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008A13-          ATTCGCACAGTGCGCGGGTTACCAAAAGTAGCAGACAACG                    
JMFN006J03+           ATTCGCACAGTGCGCGGGTTACCAAAAGTAGCAGACAACGACGGCGCCGATGGCTTCGCA
JMFF008A13+           ATTCGCACAGTGCGCGGGTTACCAAAAGTAGCAGACAACGACGGCGCCGATGGCTTCGCA
                      ____________________________________________________________
consensus             ATTCGCACAGTGCGCGGGTTACCAAAAGTAGCAGACAACGACGGCGCCGATGGCTTCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006J03+           AAAGACTGTTTTCCGCCGGTGACGAAGCCCGGGAACAGGTGCAAAGACAACGCCATTTCT
JMFF008A13+           AAAGACTGTTTTCCGCCGGTGACGAAGCCCGGGAACAGGTGCAAAGACAACGCCATTTCT
                      ____________________________________________________________
consensus             AAAGACTGTTTTCCGCCGGTGACGAAGCCCGGGAACAGGTGCAAAGACAACGCCATTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006J03+           CTGATAAAACTTTGGATTTGTAAATTACAGAGAA                          
JMFF008A13+           CTGATAAAACTTTGGATTTGTAAATTACAGAGAAGCAGAAGAGCGGCAGCAGATAAGAGT
                      ____________________________________________________________
consensus             CTGATAAAACTTTGGATTTGTAAATTACAGAGAAGCAGAAGAGCGGCAGCAGATAAGAGT