| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007L21 | Sequence | 529 | 008742 (8) | ref|XP_010315235.1| | 6e-62 | PREDICTED: calmodulin-like protein 1 [Solanum lycopersicum] | 780 | 008742 (8) | ref|XP_010315235.1| | 4e-86 | PREDICTED: calmodulin-like protein 1 [Solanum lycopersicum] |
| JMFF034O15 | Sequence | 689 | 008742 (8) | ref|XP_010315235.1| | 8e-75 | PREDICTED: calmodulin-like protein 1 [Solanum lycopersicum] | |||||
| JMFF039K05 | Sequence | 596 | 008742 (8) | ref|XP_010315235.1| | 1e-85 | PREDICTED: calmodulin-like protein 1 [Solanum lycopersicum] | |||||
| JMFF045O05 | Sequence | 593 | 008742 (8) | ref|XP_009590682.1| | 8e-85 | PREDICTED: calmodulin-like protein 1 [Nicotiana tomentosiformis] | 567 | 008742 (8) | ref|XP_010315235.1| | 2e-65 | PREDICTED: calmodulin-like protein 1 [Solanum lycopersicum] |
| JMSF001I18 | Sequence | 384 | 008742 (8) | ref|XP_010315235.1| | 3e-45 | PREDICTED: calmodulin-like protein 1 [Solanum lycopersicum] | 762 | 008742 (8) | ref|XP_010315235.1| | 4e-84 | PREDICTED: calmodulin-like protein 1 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF001I18- CAGATTATTATTCAAGTTTATCCCATACT
rJMFF034O15- AGTTTATCCCATACT
rJMFF007L21- GATTATTATTCAAGTTTATCCCATACT
____________________________________________________________
consensus CAGATTATTATTCAAGTTTATCCCATACT
. : . : . : . : . : . :
rJMFF045O05- GCTCCTAAGGTTGTAACAATTGAAAGTTAAACTCAC
rJMSF001I18- AAAGTAAACTTGATTTGCTTCTATGCTCCTAAGGTTGTAACAATTGAAAGTTAAACTCAC
rJMFF034O15- AAAGTAAACTTGATTTGCTTCTATGCTCCTAAGGTTGTAACAATTGAAAGTTAAACTCAC
rJMFF007L21- AAAGTAAACTTGATTTGCTTCTATGCTCCTAAGGTTGTAACAATTGAAAGTTAAACTCAC
____________________________________________________________
consensus AAAGTAAACTTGATTTGCTTCTATGCTCCTAAGGTTGTAACAATTGAAAGTTAAACTCAC
. : . : . : . : . : . :
rJMFF045O05- ATAATCATAAAGGTCTACACAAAAGCAGCAGAAGCAACACTGAATCACACACACACATAA
rJMSF001I18- ATAATCATAAAGGTCTACACAAAAGCAGCAGAAGCAACACTGAATCACACACACACATAA
rJMFF034O15- ATAATCATAAAGGTCTACACAAAAGCAGCAGAAGCAACACTGAATCACACACACACATAA
rJMFF007L21- ATAATCATAAAGGTCTACACAAAAGCAGCAGAAGCAACACTGAATCACACACACACATAA
____________________________________________________________
consensus ATAATCATAAAGGTCTACACAAAAGCAGCAGAAGCAACACTGAATCACACACACACATAA
. : . : . : . : . : . :
rJMFF045O05- GCCAATCATCATTCAAGTTAACTACAGGTCTCATTTCCCTTTGCTAGTTTGGCCTGAAAA
rJMSF001I18- GCCAATCATCATTCAAGTTAACTACAGGTCTCATTTCCCTTTGCTAGTTTGGCCTGTAAA
rJMFF034O15- GCCAATCATCATTCAAGTTAACTACAGGTCTCATTTCCCTTTGCTAGTTTGGCCTGTAAA
rJMFF007L21- GCCAATCATCATTCAAGTTAACTACAGGTCTCATTTCCCTTTGCTAGTTTGGCCTGTAAA
____________________________________________________________
consensus GCCAATCATCATTCAAGTTAACTACAGGTCTCATTTCCCTTTGCTAGTTTGGCCTGTAAA
. : . : . : . : . : . :
rJMFF045O05- TTCTAACAGATCCTGGCGGTTCGAGTCATCATGGTGATGAATTCATCCATGTCGATCACG
rJMSF001I18- TTCTAACAGATCCTGGCGGTTCGAGTCATCATGGTGATGAATTCATCCATGTCGATCACG
rJMFF034O15- TTCTAACAGATCCTGGCGGTTCGAGTCATCATGGTGATGAATTCATCCATGTCGATCACG
rJMFF007L21- TTCTAACAGATCCTGGCGGTTCGAGTCATCATGGTGATGAATTCATCCATGTCGATCACG
JMFF045O05+ CGGTTCGAGTCATCATGGTGATGAATTCATCCATGTCGATCACG
JMFF039K05+ CGAGTCATCATGGTGATGAATTCATCCATGTCGATCACG
____________________________________________________________
consensus TTCTAACAGATCCTGGCGGTTCGAGTCATCATGGTGATGAATTCATCCATGTCGATCACG
. : . : . : . : . : . :
rJMFF045O05- CCATCTCGGTTAGCGTCCACGGCTCTCACCATCTCCCTGCAATCTTGCAGGCTGCACTTC
rJMSF001I18- CCATCTCGGTTAGCGTCCACGGCTCTCACCATCTCCCTGCAATCTTGCAGGCTGCACTTC
rJMFF034O15- CCATCTCGGTTAGCGTCCACGGCCCTCACCATCTCCCTGCAATCTTGCAGGCTGCACTTC
rJMFF007L21- CCATCTCGGTTAGCGTCCACGGCCCTCACCATCTCCCTGCAATCTTGCAGGCTGCACTTC
JMFF045O05+ CCATCTCGGTTAGCGTCCACGGCTCTCACCATCTCCCTGCAATCTGCACGTCTGCACTTC
JMFF039K05+ CCATCTCGGTTAGCGTCCACGGCTCTCACCATCTCCCTGCAATCTTGCAGGCTGCACTTC
____________________________________________________________
consensus CCATCTCGGTTAGCGTCCACGGCTCTCACCATCTCCCTGCAATCTTGCAGGCTGCACTTC
. : . : . : . : . : . :
rJMFF045O05- TCCCCGAGCCTCTGCAGCAGCGCATACACTTCTCCCGCACTGATCTTCCCATCGCCATCC
rJMSF001I18- TCCCCGAGCCTCTGCAGCAGCGCATACACTTCTCCCGCACTGATCTTCCCATCGCCATCC
rJMFF034O15- TCCCCGAGCCTCTGCAGCAGCGCATACACTTCTCCCGCACTGATCTTCCCATCGCCATCC
rJMFF007L21- TCCCCGAGCCTCTGCAGCAGCGCATACACTTCTCCCGCACTGATCTTCCCATCGCCATCC
JMFF045O05+ TCCCCGAGCCTCTGCAGCAGCGCATACACTTCTCCCGCACTGATCTTCCCATCGCCATCC
JMFF039K05+ TCCCCGAGCCTCTGCAGCAGCGCATACACTTCTCCCGCACTGATCTTCCCATCGCCATCC
JMFF007L21+ CTGCAGCAGCGCATACACTTCTCCCGCACTGATCTTCCCATCGCCATCC
____________________________________________________________
consensus TCCCCGAGCCTCTGCAGCAGCGCATACACTTCTCCCGCACTGATCTTCCCATCGCCATCC
. : . : . : . : . : . :
rJMFF045O05- TTGTCGAACGTCTTGAATGCGGTCTGCAGGTCCATCATTTTCATGCCTCCTCCCTTCTTC
rJMSF001I18- TTGTCGAACGTCTTGAATGCGGTCTGCAGGTCCATCATTTTCATGCCTCCTCCCTTCTTC
rJMFF034O15- TTGTCGAACGTCTTGAATGCGGTCTGCAGGTCCATCATTTTCATGCCTCCTCCCTTCTTC
rJMFF007L21- TTGTCGAACGTCTTGAATGCGGTCTGCAGGTCCATCATTTTCATGCCTCCTCCCTTCTTC
JMFF045O05+ TTGTCGAACGTCTTGAATGCGGTCTGCAGGTCCATCATTTTCATGCCTCCTCCCTTCTTC
JMFF039K05+ TTGTCGAACGTCTTGAATGCGGTCTGCAGGTCCATCATTTTCATGCCTCCTCCCTTCTTC
JMSF001I18+ TTCTTC
JMFF007L21+ TTGTCGAACGTCTTGAATGCGGTCTGCAGGTCCATCATTTTCATGCCTCCTCCCTTCTTC
____________________________________________________________
consensus TTGTCGAACGTCTTGAATGCGGTCTGCAGGTCCATCATTTTCATGCCTCCTCCCTTCTTC
. : . : . : . : . : . :
rJMFF045O05- TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
rJMSF001I18- TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
rJMFF034O15- TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
rJMFF007L21- TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
JMFF045O05+ TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
JMFF039K05+ TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
JMSF001I18+ TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
JMFF007L21+ TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
____________________________________________________________
consensus TGCACTTCCACAAACTCATTGAAGTCTATAAACCCATCGCCATCAGAGTCTGCAACCTCG
. : . : . : . : . : . :
rJMFF045O05- AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
rJMSF001I18- AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
rJMFF034O15- AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
rJMFF007L21- AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
JMFF045O05+ AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
JMFF039K05+ AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
JMSF001I18+ AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
JMFF007L21+ AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
____________________________________________________________
consensus AATATCTTCTGGACTTCCCTCGTAAGCAGCATCGTCTTTCCCATGGATCTTAGTATGGCC
. : . : . : . : . : . :
rJMFF045O05- TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAA
rJMSF001I18- TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAAATCTGTCAAAGACTTGC
rJMFF034O15- TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAAATCTGTCAAAGACTTGC
rJMFF007L21- TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAAATCTGTCAAAGACTTGC
JMFF045O05+ TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAAATCTGTCAAAGACTTGC
JMFF039K05+ TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAAATCTGTCAAAGACTTGC
JMSF001I18+ TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAAATCTGTCAAAGACTTGC
JMFF007L21+ TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAAATCTGTCAAAGACTTGC
____________________________________________________________
consensus TTGTACTCATCTGGGGAGATCTTTCCATCTCTGTTGGAATCAAATCTGTCAAAGACTTGC
. : . : . : . : . : . :
rJMSF001I18- TTCAGATCATACATACTCGGTTGGTAAGTCGGCCCCAAGCCAGAGTTTTGCCTGCTGTTT
rJMFF034O15- TTCAGATCATACATACTCGGTTGGTAAGTCGGCCCCAAGCCAGAGTTTTGCCTGCTGTTT
rJMFF007L21- TTCAGATCATACATACTCGGTTGGTAAGTCGGCCCCAAGCCAGAGTTTTGCCTGCTGTTT
JMFF045O05+ TTCAGATCATACATACTCGGTTGGTAAGTCGGCCCCAAGCCAGAGTTTTGCCTGCTGTTT
JMFF039K05+ TTCAGATCATACATACTCGGTTGGTAAGTCGGCCCCAAGCCAGAGTTTTGCCTGCTGTTT
JMSF001I18+ TTCAGATCATACATACTCGGTTGGTAAGTCGGCCCCAAGCCAGAGTTTTGCCTGCTGTTT
JMFF007L21+ TTCAGATCATACATACTCGGTTGGTAAGTCGGCCCCAAGCCAGAGTTTTGCCTGCTGTTT
____________________________________________________________
consensus TTCAGATCATACATACTCGGTTGGTAAGTCGGCCCCAAGCCAGAGTTTTGCCTGCTGTTT
. : . : . : . : . : . :
rJMSF001I18- TGCCTACTGCGCGAGAACATATTAGTTGGCTTCCTCAAGAAACTTCTCTTCGAGAGGCTG
rJMFF034O15- TGCCTACTGCGCGA
rJMFF007L21- TGCCTACTGCGCGAGAACATATTANTTGGCTTCCTCAAGAAACTTCTCTTCGAGAGGCTG
JMFF045O05+ TGCCTACTGCGCGAGAACATATTAGTTGGCTTCCTCAAGAAACTTCTCTTCGAGAGGCTG
JMFF039K05+ TGCCTACTGCGCGAGAACATATTAGTTGGCTTCCTCAAGAAACTTCTCTTCGAGAGGCTG
JMSF001I18+ TGCCTACTGCGCGAGAACATATTAGTTGGCTTCCTCAAGAAACTTCTCTTCGAGAGGCTG
JMFF007L21+ TGCCTACTGCGCGAGAACATATTAGTTGGCTTCCTCAAGAAACTTCTCTTCGAGAGGCTG
____________________________________________________________
consensus TGCCTACTGCGCGAGAACATATTAGTTGGCTTCCTCAAGAAACTTCTCTTCGAGAGGCTG
. : . : . : . : . : . :
rJMSF001I18- TACTGCATATCCA
rJMFF007L21- TACTGCATATCCAGAAAAGTTGTGCTCGTCATT
JMFF045O05+ TACTGCATATCCAGAAAAGTTGTGCTCGTCATTCTTTCAGCAGTTATTTCAGTTGATAGA
JMFF039K05+ TACTGCATATCCAGAAAAGTTGTGCTCGTCATTCTTTCAGCAGTTATTTCAGTTGATAGA
JMSF001I18+ TACTGCATATCCAGAAAAGTTGTGCTCGTCATTCTTTCAGCAGTTATTTCAGTTGATAGA
JMFF007L21+ TACTGCATATCCAGAAAAGTTGTGCTCGTCATTCTTTCAGCAGTTATTTCAGTTGATAGA
____________________________________________________________
consensus TACTGCATATCCAGAAAAGTTGTGCTCGTCATTCTTTCAGCAGTTATTTCAGTTGATAGA
. : . : . : . : . : . :
JMFF045O05+ GCGAAAACT
JMFF039K05+ GCGAAAACTAGAGTACT
JMSF001I18+ GCGAAAACTAGAGTACT
JMFF007L21+ GCGAAAACTAGAGTACTATGGAAATCTCAACCTGTTGTCAAACAATAAATAGGTATGAAC
____________________________________________________________
consensus GCGAAAACTAGAGTACTATGGAAATCTCAACCTGTTGTCAAACAATAAATAGGTATGAAC