Contig 008741:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF034K19-                             ATGCTCATTACAAAGCATATTATATAACACATGATAAGGGA
                      ____________________________________________________________
consensus                                ATGCTCATTACAAAGCATATTATATAACACATGATAAGGGA
 
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rJMSF034K19-          ACAGATCCACCATTTTATCATTTAGAAATAATACCCCTTCTACCTACCTCTACTCTACCC
                      ____________________________________________________________
consensus             ACAGATCCACCATTTTATCATTTAGAAATAATACCCCTTCTACCTACCTCTACTCTACCC
 
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rJMSF034K19-          TGTCATTATGCTCAGAAACGCCATTCCCTGCATATAGCCAAGAGGTGGAAAGGTTCCGAG
                      ____________________________________________________________
consensus             TGTCATTATGCTCAGAAACGCCATTCCCTGCATATAGCCAAGAGGTGGAAAGGTTCCGAG
 
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rJMSF034K19-          CTTTTCTATCCAACTGAAGGTTTTCCAAGGCAGTTGAAGCACGGACTACATCTTCTTCAA
                      ____________________________________________________________
consensus             CTTTTCTATCCAACTGAAGGTTTTCCAAGGCAGTTGAAGCACGGACTACATCTTCTTCAA
 
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rJMSF034K19-          CCTCATCGCTCTCATATCTCCAGTTGTATTCATCTTTCCTGTATCCAGACACAGATGACC
                      ____________________________________________________________
consensus             CCTCATCGCTCTCATATCTCCAGTTGTATTCATCTTTCCTGTATCCAGACACAGATGACC
 
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rJMSF034K19-          CTGCTCGTCTATTACTAGATGCCTGAGAAACAGGAACTGGCCTTCCCAATGGAGGTAAGC
JMSF034K19+                                                           ATGGAGGTAAGC
                      ____________________________________________________________
consensus             CTGCTCGTCTATTACTAGATGCCTGAGAAACAGGAACTGGCCTTCCCAATGGAGGTAAGC
 
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rJMSF034K19-          CCCCGGCAACTGATGAAGATGGAGGTCTCCTACTGTCCCGCATTTCTAAGTTGGGCAATG
JMSF034K19+           CCCCGGCAACTGATGAAGATGGAGGTCTCCTACTGTCCCGCATTTCTAAGTTGGGCAATG
                      ____________________________________________________________
consensus             CCCCGGCAACTGATGAAGATGGAGGTCTCCTACTGTCCCGCATTTCTAAGTTGGGCAATG
 
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rJMSF034K19-          ATTCAGCCTCTGGCGTGGTCAATCTCCTTCCAGCACCCCTTGCTTGAGATAAATTCTCAT
JMSF034K19+           ATTCAGCCTCTGGCGTGGTCAATCTCCTTCCAGCACCCCTTGCTTGAGATAAATTCTCAT
JMFF007L10+                                               CCCTTGCTTGAGATAAATTCTCAT
                      ____________________________________________________________
consensus             ATTCAGCCTCTGGCGTGGTCAATCTCCTTCCAGCACCCCTTGCTTGAGATAAATTCTCAT
 
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rJMSF034K19-          ACTTCGAGAATCCTTCAAGAACATCCAAAA-GTAACGGTCCACTGTCTCCATTCATGTTA
JMSF034K19+           ACTTCGAGAATCCTTCAAGAACATCCAAAA-GTAACGGTCCACTGTCTCCATTCATGTTA
JMFF007L10+           ACTTCAAGAATCCTTCAAGGACGTCCAAAAGGCAGTGGACCACTGTCACCATTCCTATTA
                      ____________________________________________________________
consensus             ACTTCGAGAATCCTTCAAGAACATCCAAAA-GTAACGGTCCACTGTCTCCATTCATGTTA
 
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rJMSF034K19-          AGATCATATCCATTCTTGCTACTAAATTCTTTTAACTCAGATTTCCAGAAATCCTTTTGC
JMSF034K19+           AGATCATATCCATTCTTGCTACTAAATTCTTTTAACTCAGATTTCCAGAAATCCTTTTGC
JMFF007L10+           ATATCATACCCATTCTTGCTACTAAATTCTTTTAACTCAGATTTCCAGAAATCCTTTTGC
                      ____________________________________________________________
consensus             AGATCATATCCATTCTTGCTACTAAATTCTTTTAACTCAGATTTCCAGAAATCCTTTTGC
 
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rJMSF034K19-          AAATTACACTCTGGCAAATAAACTTTCAATGTATGGTTTAATTGAGCCCAATCCAAATAT
JMSF034K19+           AAATTACACTCTGGCAAATAAACTTTCAATGTATGGTTTAATTGAGCCCAATCCAAATAT
JMFF007L10+           AAATTGCACTCTGGCAAATAAACTTTAGATGTATGGTTTAGCTGAGCCCAGTCCAAATAT
                      ____________________________________________________________
consensus             AAATTACACTCTGGCAAATAAACTTTCAATGTATGGTTTAATTGAGCCCAATCCAAATAT
 
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rJMSF034K19-          TCACATACAAGTGCAGTTAGTAGCCTTCCTGA                            
JMSF034K19+           TCACATACAAGTGCAGTTAGTAGCCTTCCTGATGGAGAATTATGAAGATGTTTAGCACGA
JMFF007L10+           TCACATATCAGTGCAGTTAGTAGCCTTCCTGAAGGTGAATGGTGGAGTTGTTTAGCACGA
                      ____________________________________________________________
consensus             TCACATACAAGTGCAGTTAGTAGCCTTCCTGATGGTGAATTGTGGAGTTGTTTAGCACGA
 
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JMSF034K19+           TCATTGCAGCTGCCTAATAGAGCTGGAGGCAAGCCTTCATCCTTTTCAATTGCTCTATCC
JMFF007L10+           TCATTGCAGCTACCCAATAGAGCAGGAGGCAAGCCTTCATCCTTTTCAATCACCCTATCC
                      ____________________________________________________________
consensus             TCATTGCAGCTGCCTAATAGAGCTGGAGGCAAGCCTTCATCCTTTTCAATTGCTCTATCC
 
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JMSF034K19+           TCCTCCTCAATTGCCTCAAAGACATTTGCCCTAAGTTCAGCTCGGATCTTGGCGAGAACG
JMFF007L10+           TCCCCCTCAATCGCCTCAAATACACTGGCTCTAAGTTCAGCCCGGATCTTAGCGAGGACG
                      ____________________________________________________________
consensus             TCCTCCTCAATTGCCTCAAATACATTTGCTCTAAGTTCAGCTCGGATCTTGGCGAGGACG
 
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JMSF034K19+           CCTTTCTTCTCGAGGGTTCGAGTGACGAGGGTTTTGAGGTCCATCATCTCCCTGGTATAA
JMFF007L10+           CCCTTCTTTTCTAGGGTTCGAGTGACGAGGGTTTTGAGGTCCATCATTTCTCTGGTGTAA
                      ____________________________________________________________
consensus             CCTTTCTTTTCTAGGGTTCGAGTGACGAGGGTTTTGAGGTCCATCATTTCTCTGGTGTAA
 
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JMSF034K19+           TCGTCCATTTT                                                 
JMFF007L10+           TCGTCCATTTTTGTTGCTCTTCTCCTCCTCCTCCTCCTCCTTCTTCTTGTCCGCTGAGGT
                      ____________________________________________________________
consensus             TCGTCCATTTTTGTTGCTCTTCTCCTCCTCCTCCTCCTCCTTCTTCTTGTCCGCTGAGGT
 
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JMFF007L10+           TAGCTTCGAGCGAAACGTTGCTGCTTTGGGCCCGAGAAAGAGAGACAGAAACAGGAACAG
                      ____________________________________________________________
consensus             TAGCTTCGAGCGAAACGTTGCTGCTTTGGGCCCGAGAAAGAGAGACAGAAACAGGAACAG