| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007J15 | Sequence | 549 | 008740 (4) | ref|XP_009800759.1| | 3e-19 | PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl | |||||
| JMFS090G04 | Sequence | 617 | 008740 (4) | ref|XP_009800759.1| | 2e-61 | PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl | |||||
| JMFS118H09 | Sequence | 625 | 008740 (4) | ref|XP_009800759.1| | 1e-30 | PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl | |||||
| JMSF038B02 | Sequence | 698 | 008740 (4) | ref|XP_009800759.1| | 1e-51 | PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl | 813 | 007118 (2) | ref|XP_009798332.1| | 5e-22 | PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 [Nicotian |
This contig is upended
. : . : . : . : . : . :
JMFS090G04+ TAGT
____________________________________________________________
consensus TAGT
. : . : . : . : . : . :
JMFS090G04+ ATTGGATTCNCCACACGATTCCTCTGGCTNTGAGATATTTGATCCATTTACTTCAATCTT
____________________________________________________________
consensus ATTGGATTCNCCACACGATTCCTCTGGCTNTGAGATATTTGATCCATTTACTTCAATCTT
. : . : . : . : . : . :
JMFS090G04+ AATTTTCAGCTTCATATCATTGGAGACTAGATTATCTAAATTTACCTCAATGTAATTGTT
____________________________________________________________
consensus AATTTTCAGCTTCATATCATTGGAGACTAGATTATCTAAATTTACCTCAATGTAATTGTT
. : . : . : . : . : . :
JMFS090G04+ CCCATTTTTAGTTTCATAGTATTCATCCACTTCATCACAGTCTGTAAAATTTTCAGGGAA
JMSF038B02+ TTTCATAGTATTCATCCACTTCATCACAGTCTGTAAAATTTTCAGGGAA
____________________________________________________________
consensus CCCATTTTTAGTTTCATAGTATTCATCCACTTCATCACAGTCTGTAAAATTTTCAGGGAA
. : . : . : . : . : . :
JMFS090G04+ AAAACGGTTCCCAGCTTCATCAATCCATGCAATTGGTTGCTGTGAACCTGTCTTCAAGTC
JMSF038B02+ AAAACGGTTCCCAGCTTCATCAATCCATGCAATTGGTTGCTGTGAACCTGTCTTCAAGTC
____________________________________________________________
consensus AAAACGGTTCCCAGCTTCATCAATCCATGCAATTGGTTGCTGTGAACCTGTCTTCAAGTC
. : . : . : . : . : . :
JMFS090G04+ CACCAGCATTACAGAGACAAAGTCAAGCACACAAATTCTACCAAAAAAGTCTACCTCTAT
JMSF038B02+ CACCAGCATTACAGAGACAAAGTCAAGCACACAAATTCTACCAAAAAAGTCTACCTCTAT
JMFS118H09+ GAGACAAAGTCAAGCACACAAATTCTACCAAAANAGTCTACCTCTAT
____________________________________________________________
consensus CACCAGCATTACAGAGACAAAGTCAAGCACACAAATTCTACCAAAAAAGTCTACCTCTAT
. : . : . : . : . : . :
JMFS090G04+ AACTGATTTCTCCATCTGCAAATCTTTTCTAACGATTGCAAGAATATCCTCAGGAAAGTC
JMSF038B02+ AACTGATTTCTCCATCTGCAAATCTTTTCTAACGATTGCAAGAATATCCTCAGGAAAGTC
JMFS118H09+ AACTGATTTCTCCATCTGCAAATCTTTTCTAACGATTGCAAGAATATCCTCAGGAAAGTC
JMFF007J15+ AGGAAAGTC
____________________________________________________________
consensus AACTGATTTCTCCATCTGCAAATCTTTTCTAACGATTGCAAGAATATCCTCAGGAAAGTC
. : . : . : . : . : . :
JMFS090G04+ AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
JMSF038B02+ AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
JMFS118H09+ AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
JMFF007J15+ AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
____________________________________________________________
consensus AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
. : . : . : . : . : . :
JMFS090G04+ CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
JMSF038B02+ CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
JMFS118H09+ CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
JMFF007J15+ CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
____________________________________________________________
consensus CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
. : . : . : . : . : . :
JMFS090G04+ CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
JMSF038B02+ CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
JMFS118H09+ CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
JMFF007J15+ CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
____________________________________________________________
consensus CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
. : . : . : . : . : . :
JMFS090G04+ CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
JMSF038B02+ CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
JMFS118H09+ CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
JMFF007J15+ CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
____________________________________________________________
consensus CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
. : . : . : . : . : . :
JMFS090G04+ CAAATCAACATCA
JMSF038B02+ CAAATCAACATCATAATGCCTATCCAATTCCCTTCCTAAGTTTACATCCATTTCTTCCTA
JMFS118H09+ CAAATCAACATCATAATGCCTATCCAATTCCCTTCCTAAGTTTACATCCATTTCTTCCTA
JMFF007J15+ CAAATCAACATCATAATGCCTATCCAATTCCCTTCCTAAGTTTACATCCATTTCTTCCTA
____________________________________________________________
consensus CAAATCAACATCATAATGCCTATCCAATTCCCTTCCTAAGTTTACATCCATTTCTTCCTA
. : . : . : . : . : . :
JMSF038B02+ GAGAGTGAAACCCTATCAACAACTTCAAATCGAAGATTTCAAAGATAACTCTATACAACA
JMFS118H09+ GAGAGTGAAACCCTATCAACAACTTCAAATCGAAGATTTCAAAGATAACTCTATACAACA
JMFF007J15+ GAGAGTGAAACCCTATCAACAACTTCAAATCGAAGATTTCAAAGATAACTCTATACAACA
____________________________________________________________
consensus GAGAGTGAAACCCTATCAACAACTTCAAATCGAAGATTTCAAAGATAACTCTATACAACA
. : . : . : . : . : . :
JMSF038B02+ ACTCAATCTTAGTTTTGCCTCATAGAGACCGTTCCATTTACAAAATCTGCATACCCAGAG
JMFS118H09+ ACTCAATCTTAGTTTTGCCTCATAGAGACCGTTCCATTTACAAAATCTGCATACCCAGAG
JMFF007J15+ ACTCAATCTTAGTTTTGCCTCATAGAGACCGTTCCATTTACAAAATCTGCATACCCAGAG
____________________________________________________________
consensus ACTCAATCTTAGTTTTGCCTCATAGAGACCGTTCCATTTACAAAATCTGCATACCCAGAG
. : . : . : . : . : . :
JMSF038B02+ TTACAGAGATTGAAAAGCCGACAAATTAGTCTTCCTCATCCAAATTGT
JMFS118H09+ TTACAGAGATTGAAAAGCCGACAAATTAGTCTTCCTCATCCAAATTGTACTTCCCGTCAA
JMFF007J15+ TTACAGAGATTGAAAAGCCGACAAATTAGTCTTCCTCATCCAAATTGTACTTCCCGTCAA
____________________________________________________________
consensus TTACAGAGATTGAAAAGCCGACAAATTAGTCTTCCTCATCCAAATTGTACTTCCCGTCAA
. : . : . : . : . : . :
JMFS118H09+ CAGCGGTGTCAAACCCTAAATCCGCCCGAAGAATTCTC
JMFF007J15+ CAGCGGTGTCAAACCCTAAATCCGCCCGAAGAATTCTCAGCGGGACAAGTGGACAACTAC
____________________________________________________________
consensus CAGCGGTGTCAAACCCTAAATCCGCCCGAAGAATTCTCAGCGGGACAAGTGGACAACTAC