Contig 008738:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006O24Sequence526008738 (3)emb|CAN64859.1|9e-71hypothetical protein VITISV_030494 [Vitis vinifera]731008738 (3)gb|KHN29132.1|2e-25hypothetical protein glysoja_008467 [Glycine soja]
JMSF027J09Sequence503008738 (3)emb|CAN64859.1|1e-51hypothetical protein VITISV_030494 [Vitis vinifera]183012749 (5)gb|EYU31850.1|4e-17hypothetical protein MIMGU_mgv1a003987mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF006O24- TTTGATTCTCTTTCGATTCCATCCCTAT
                      ____________________________________________________________
consensus TTTGATTCTCTTTCGATTCCATCCCTAT
 
. : . : . : . : . : . :
rJMFF006O24- GTTCAAACTAAACACACCCTAATTTTCTACCAACAAAAGATACGTGGGGAACGGTGACGG
                      ____________________________________________________________
consensus GTTCAAACTAAACACACCCTAATTTTCTACCAACAAAAGATACGTGGGGAACGGTGACGG
 
. : . : . : . : . : . :
rJMFF006O24- TTTATAAATAAATAAAAATAAAAAGAATATCTTGACACAGAGTATTGGAAGCCAAACTTT
                      ____________________________________________________________
consensus TTTATAAATAAATAAAAATAAAAAGAATATCTTGACACAGAGTATTGGAAGCCAAACTTT
 
. : . : . : . : . : . :
rJMFF006O24- AAAGACAAAATGACAAGACAAATATAAATACAGGAAGATCACAACCTGCAACAACATATA
                      ____________________________________________________________
consensus AAAGACAAAATGACAAGACAAATATAAATACAGGAAGATCACAACCTGCAACAACATATA
 
. : . : . : . : . : . :
rJMFF006O24- ACCCCTACTAAGGCAAAACAGGGCATAACCAGCATGTATAGAGTTCTTTTAGGTAGTTGA
                      ____________________________________________________________
consensus ACCCCTACTAAGGCAAAACAGGGCATAACCAGCATGTATAGAGTTCTTTTAGGTAGTTGA
 
. : . : . : . : . : . :
rJMFF006O24- AAGCAAGCAAGCATTGCCACGCGCTGAGTATACTTTTCATAACCTCCAACTTTCTTTATT
                      ____________________________________________________________
consensus AAGCAAGCAAGCATTGCCACGCGCTGAGTATACTTTTCATAACCTCCAACTTTCTTTATT
 
. : . : . : . : . : . :
rJMFF006O24- CATCCTATTAGCAACCACTGTATACTGCTGTGGAATCAATCTTTGCAGGTATCTTTGATA
                      ____________________________________________________________
consensus CATCCTATTAGCAACCACTGTATACTGCTGTGGAATCAATCTTTGCAGGTATCTTTGATA
 
. : . : . : . : . : . :
rJMFF006O24- CTCTCGGAGCATAGGAATATATGGTTGGAACTCTTAGTACGGGAATTCATGGTCGGGAGG
JMSF027J09+ AGG
                      ____________________________________________________________
consensus CTCTCGGAGCATAGGAATATATGGTTGGAACTCTTAGTACGGGAATTCATGGTCGGGAGG
 
. : . : . : . : . : . :
rJMFF006O24- ATCAGAATGCATGTCCATTGAAGTATCATTGGAGCTCTGAAGATTGGCGTCTCTGCTTTG
JMSF027J09+ ATCAGAATGCATGTCCATTGAAGTATCATTGGAGCTCTGAAGATNGGCGTCTCTGCTTTG
                      ____________________________________________________________
consensus ATCAGAATGCATGTCCATTGAAGTATCATTGGAGCTCTGAAGATTGGCGTCTCTGCTTTG
 
. : . : . : . : . : . :
rJMFF006O24- TAGATAGTTGTTGTCACTAAGTCGGGTTCCACCAGCAGAGGATGGGGGGGCGTTTTGAGG
JMSF027J09+ TAGATAGTTGTTGTCACTAAGTCGGGTTCCACCAGCAGAGGATGGGGGGGCGTTTTGAGG
                      ____________________________________________________________
consensus TAGATAGTTGTTGTCACTAAGTCGGGTTCCACCAGCAGAGGATGGGGGGGCGTTTTGAGG
 
. : . : . : . : . : . :
rJMFF006O24- GAAACCTCCCTGTACCAGGTGATAGTGCTGAAGGCTCCTACGAATGGGGCTGGACAGCGC
JMSF027J09+ GAAACCTCCCTGTACCAGGTGATAGTGCTGAAGGCTCCTACGAATGGGGCTGGACAGCGC
JMFF006O24+ CCAGGTGATAGTGCTGAAGGCTCCTACGAATGGGGCTGGACAGCGC
                      ____________________________________________________________
consensus GAAACCTCCCTGTACCAGGTGATAGTGCTGAAGGCTCCTACGAATGGGGCTGGACAGCGC
 
. : . : . : . : . : . :
rJMFF006O24- GTTTGAAAAGACAGAGTTCTTCGGTTGCTGATCAGAATGTCCTGAACGAAGCCCGTTGGA
JMSF027J09+ GTTTGAAAAGACAGAGTTCTTCGGTTGCTGATCAGAATGTCCTGAACGAAGCCCGTTGGA
JMFF006O24+ GTTTGAAAAGACAGAGTTCTTCGGTTGCTGATCAGAATGTCCTGAACGAAGCCCGTTGGA
                      ____________________________________________________________
consensus GTTTGAAAAGACAGAGTTCTTCGGTTGCTGATCAGAATGTCCTGAACGAAGCCCGTTGGA
 
. : . : . : . : . : . :
rJMFF006O24- AGCAGTTGCTGGACCAAAAGAAGTAGAAGAAACAGGAAATCCA
JMSF027J09+ AGCAGTTGCTGGACCAAAAGAAGTAGAAGAAACAGGAAATCCAGAATTCGGTATATGCAN
JMFF006O24+ AGCAGTTGCTGGACCAAAAGAAGTAGAAGAAACAGGAAATCCAGAATTCGGTATATGCAT
                      ____________________________________________________________
consensus AGCAGTTGCTGGACCAAAAGAAGTAGAAGAAACAGGAAATCCAGAATTCGGTATATGCAT
 
. : . : . : . : . : . :
JMSF027J09+ GGAAGTTTGAGACTGNTGNTGCTGCAATGGCAGCCTTTGGGATGTTGGGGGTTCCTCAGC
JMFF006O24+ GGAAGTTTGAGACTGCTGCTGCTGCAATGGCAGCCTTTGGGATGTTGGGGGTTCCTCAGC
                      ____________________________________________________________
consensus GGAAGTTTGAGACTGCTGCTGCTGCAATGGCAGCCTTTGGGATGTTGGGGGTTCCTCAGC
 
. : . : . : . : . : . :
JMSF027J09+ TCCATAGTCAAGCTCATGCTGGAGGTAAGCAACTATATCACTGGGGTTCACTCTATTTCC
JMFF006O24+ TCCATAGTCAAGCTCATGCTGGAGGTAAGCAACTATATCACTGGGGTTCACTCTATTTCC
                      ____________________________________________________________
consensus TCCATAGTCAAGCTCATGCTGGAGGTAAGCAACTATATCACTGGGGTTCACTCTATTTCC
 
. : . : . : . : . : . :
JMSF027J09+ ATCTTCTTGCTGCCTTAACATCCAATTATAGAGTTNTTCCAGCGCGTGACGTTCGCCGGC
JMFF006O24+ ATCTTCTTGCTGCCTTAACATCCAATTATAGAGTTTTTCCAGCGCGTGACGTTCGCCGGC
                      ____________________________________________________________
consensus ATCTTCTTGCTGCCTTAACATCCAATTATAGAGTTTTTCCAGCGCGTGACGTTCGCCGGC
 
. : . : . : . : . : . :
JMSF027J09+ GTGAAACGAGAGCCGCTGGT
JMFF006O24+ GTGAAACGAGAGCCGCTGGTGCTGCATGGCTTGAGTGTAGAGCTGAGACAGAGAGTTAGC
                      ____________________________________________________________
consensus GTGAAACGAGAGCCGCTGGTGCTGCATGGCTTGAGTGTAGAGCTGAGACAGAGAGTTAGC
 
. : . : . : . : . : . :
JMFF006O24+ AGCGCTGCAAAAGGTGGAGTAGAGCGTTCTATCGACCTCGTCCAGACGGGTCGCCTCAGA
                      ____________________________________________________________
consensus AGCGCTGCAAAAGGTGGAGTAGAGCGTTCTATCGACCTCGTCCAGACGGGTCGCCTCAGA
 
. : . : . : . : . : . :
JMFF006O24+ TTTTCTCTTTTTCGCCATTATTTTTCCTCTCTGCAAAACCCTAATAAAAATAAAAATTTT
                      ____________________________________________________________
consensus TTTTCTCTTTTTCGCCATTATTTTTCCTCTCTGCAAAACCCTAATAAAAATAAAAATTTT