Contig 008738:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006O24Sequence526008738 (3)emb|CAN64859.1|9e-71hypothetical protein VITISV_030494 [Vitis vinifera]731008738 (3)gb|KHN29132.1|2e-25hypothetical protein glysoja_008467 [Glycine soja]
JMSF027J09Sequence503008738 (3)emb|CAN64859.1|1e-51hypothetical protein VITISV_030494 [Vitis vinifera]183012749 (5)gb|EYU31850.1|4e-17hypothetical protein MIMGU_mgv1a003987mg [Erythranthe guttata]

Alignment

This contig is upended


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rJMFF006O24-                                          TTTGATTCTCTTTCGATTCCATCCCTAT
                      ____________________________________________________________
consensus                                             TTTGATTCTCTTTCGATTCCATCCCTAT
 
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rJMFF006O24-          GTTCAAACTAAACACACCCTAATTTTCTACCAACAAAAGATACGTGGGGAACGGTGACGG
                      ____________________________________________________________
consensus             GTTCAAACTAAACACACCCTAATTTTCTACCAACAAAAGATACGTGGGGAACGGTGACGG
 
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rJMFF006O24-          TTTATAAATAAATAAAAATAAAAAGAATATCTTGACACAGAGTATTGGAAGCCAAACTTT
                      ____________________________________________________________
consensus             TTTATAAATAAATAAAAATAAAAAGAATATCTTGACACAGAGTATTGGAAGCCAAACTTT
 
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rJMFF006O24-          AAAGACAAAATGACAAGACAAATATAAATACAGGAAGATCACAACCTGCAACAACATATA
                      ____________________________________________________________
consensus             AAAGACAAAATGACAAGACAAATATAAATACAGGAAGATCACAACCTGCAACAACATATA
 
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rJMFF006O24-          ACCCCTACTAAGGCAAAACAGGGCATAACCAGCATGTATAGAGTTCTTTTAGGTAGTTGA
                      ____________________________________________________________
consensus             ACCCCTACTAAGGCAAAACAGGGCATAACCAGCATGTATAGAGTTCTTTTAGGTAGTTGA
 
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rJMFF006O24-          AAGCAAGCAAGCATTGCCACGCGCTGAGTATACTTTTCATAACCTCCAACTTTCTTTATT
                      ____________________________________________________________
consensus             AAGCAAGCAAGCATTGCCACGCGCTGAGTATACTTTTCATAACCTCCAACTTTCTTTATT
 
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rJMFF006O24-          CATCCTATTAGCAACCACTGTATACTGCTGTGGAATCAATCTTTGCAGGTATCTTTGATA
                      ____________________________________________________________
consensus             CATCCTATTAGCAACCACTGTATACTGCTGTGGAATCAATCTTTGCAGGTATCTTTGATA
 
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rJMFF006O24-          CTCTCGGAGCATAGGAATATATGGTTGGAACTCTTAGTACGGGAATTCATGGTCGGGAGG
JMSF027J09+                                                                    AGG
                      ____________________________________________________________
consensus             CTCTCGGAGCATAGGAATATATGGTTGGAACTCTTAGTACGGGAATTCATGGTCGGGAGG
 
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rJMFF006O24-          ATCAGAATGCATGTCCATTGAAGTATCATTGGAGCTCTGAAGATTGGCGTCTCTGCTTTG
JMSF027J09+           ATCAGAATGCATGTCCATTGAAGTATCATTGGAGCTCTGAAGATNGGCGTCTCTGCTTTG
                      ____________________________________________________________
consensus             ATCAGAATGCATGTCCATTGAAGTATCATTGGAGCTCTGAAGATTGGCGTCTCTGCTTTG
 
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rJMFF006O24-          TAGATAGTTGTTGTCACTAAGTCGGGTTCCACCAGCAGAGGATGGGGGGGCGTTTTGAGG
JMSF027J09+           TAGATAGTTGTTGTCACTAAGTCGGGTTCCACCAGCAGAGGATGGGGGGGCGTTTTGAGG
                      ____________________________________________________________
consensus             TAGATAGTTGTTGTCACTAAGTCGGGTTCCACCAGCAGAGGATGGGGGGGCGTTTTGAGG
 
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rJMFF006O24-          GAAACCTCCCTGTACCAGGTGATAGTGCTGAAGGCTCCTACGAATGGGGCTGGACAGCGC
JMSF027J09+           GAAACCTCCCTGTACCAGGTGATAGTGCTGAAGGCTCCTACGAATGGGGCTGGACAGCGC
JMFF006O24+                         CCAGGTGATAGTGCTGAAGGCTCCTACGAATGGGGCTGGACAGCGC
                      ____________________________________________________________
consensus             GAAACCTCCCTGTACCAGGTGATAGTGCTGAAGGCTCCTACGAATGGGGCTGGACAGCGC
 
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rJMFF006O24-          GTTTGAAAAGACAGAGTTCTTCGGTTGCTGATCAGAATGTCCTGAACGAAGCCCGTTGGA
JMSF027J09+           GTTTGAAAAGACAGAGTTCTTCGGTTGCTGATCAGAATGTCCTGAACGAAGCCCGTTGGA
JMFF006O24+           GTTTGAAAAGACAGAGTTCTTCGGTTGCTGATCAGAATGTCCTGAACGAAGCCCGTTGGA
                      ____________________________________________________________
consensus             GTTTGAAAAGACAGAGTTCTTCGGTTGCTGATCAGAATGTCCTGAACGAAGCCCGTTGGA
 
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rJMFF006O24-          AGCAGTTGCTGGACCAAAAGAAGTAGAAGAAACAGGAAATCCA                 
JMSF027J09+           AGCAGTTGCTGGACCAAAAGAAGTAGAAGAAACAGGAAATCCAGAATTCGGTATATGCAN
JMFF006O24+           AGCAGTTGCTGGACCAAAAGAAGTAGAAGAAACAGGAAATCCAGAATTCGGTATATGCAT
                      ____________________________________________________________
consensus             AGCAGTTGCTGGACCAAAAGAAGTAGAAGAAACAGGAAATCCAGAATTCGGTATATGCAT
 
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JMSF027J09+           GGAAGTTTGAGACTGNTGNTGCTGCAATGGCAGCCTTTGGGATGTTGGGGGTTCCTCAGC
JMFF006O24+           GGAAGTTTGAGACTGCTGCTGCTGCAATGGCAGCCTTTGGGATGTTGGGGGTTCCTCAGC
                      ____________________________________________________________
consensus             GGAAGTTTGAGACTGCTGCTGCTGCAATGGCAGCCTTTGGGATGTTGGGGGTTCCTCAGC
 
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JMSF027J09+           TCCATAGTCAAGCTCATGCTGGAGGTAAGCAACTATATCACTGGGGTTCACTCTATTTCC
JMFF006O24+           TCCATAGTCAAGCTCATGCTGGAGGTAAGCAACTATATCACTGGGGTTCACTCTATTTCC
                      ____________________________________________________________
consensus             TCCATAGTCAAGCTCATGCTGGAGGTAAGCAACTATATCACTGGGGTTCACTCTATTTCC
 
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JMSF027J09+           ATCTTCTTGCTGCCTTAACATCCAATTATAGAGTTNTTCCAGCGCGTGACGTTCGCCGGC
JMFF006O24+           ATCTTCTTGCTGCCTTAACATCCAATTATAGAGTTTTTCCAGCGCGTGACGTTCGCCGGC
                      ____________________________________________________________
consensus             ATCTTCTTGCTGCCTTAACATCCAATTATAGAGTTTTTCCAGCGCGTGACGTTCGCCGGC
 
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JMSF027J09+           GTGAAACGAGAGCCGCTGGT                                        
JMFF006O24+           GTGAAACGAGAGCCGCTGGTGCTGCATGGCTTGAGTGTAGAGCTGAGACAGAGAGTTAGC
                      ____________________________________________________________
consensus             GTGAAACGAGAGCCGCTGGTGCTGCATGGCTTGAGTGTAGAGCTGAGACAGAGAGTTAGC
 
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JMFF006O24+           AGCGCTGCAAAAGGTGGAGTAGAGCGTTCTATCGACCTCGTCCAGACGGGTCGCCTCAGA
                      ____________________________________________________________
consensus             AGCGCTGCAAAAGGTGGAGTAGAGCGTTCTATCGACCTCGTCCAGACGGGTCGCCTCAGA
 
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JMFF006O24+           TTTTCTCTTTTTCGCCATTATTTTTCCTCTCTGCAAAACCCTAATAAAAATAAAAATTTT
                      ____________________________________________________________
consensus             TTTTCTCTTTTTCGCCATTATTTTTCCTCTCTGCAAAACCCTAATAAAAATAAAAATTTT