Contig 008734:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E18Sequence643008734 (2)gb|KHG20192.1|9e-7460S ribosomal L24 [Gossypium arboreum]748009615 (6)ref|XP_011084858.1|5e-30PREDICTED: PRA1 family protein B3 [Sesamum indicum]
JMFF027H21Sequence643008734 (2)gb|KHG20192.1|9e-7460S ribosomal L24 [Gossypium arboreum]740009615 (6)ref|XP_011084858.1|6e-30PREDICTED: PRA1 family protein B3 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF027H21+ GAAGATGACGACCGGCTGATCCGACGGGCGGAAGAGGTAGAGG
JMFF006E18+ GAAGATGACGACCGGCTGATCCGACGGGCGGAAGAGGTAGAGG
                      ____________________________________________________________
consensus GAAGATGACGACCGGCTGATCCGACGGGCGGAAGAGGTAGAGG
 
. : . : . : . : . : . :
JMFF027H21+ AAGAACCAGGCGGCGAGGAGGGCCAGGAGAACGAGGAGAGACAGCGGGTGAGAGAGGAGC
JMFF006E18+ AAGAACCAGGCGGCGAGGAGGGCCAGGAGAACGAGGAGAGACAGCGGGTGAGAGAGGAGC
                      ____________________________________________________________
consensus AAGAACCAGGCGGCGAGGAGGGCCAGGAGAACGAGGAGAGACAGCGGGTGAGAGAGGAGC
 
. : . : . : . : . : . :
JMFF027H21+ GAGAAAGCGAGTACGGCGGCGAGTAAAGTAACGTAGTTGACGCGGAAGTATGAGAAGTTC
JMFF006E18+ GAGAAAGCGAGTACGGCGGCGAGTAAAGTAACGTAGTTGACGCGGAAGTATGAGAAGTTC
                      ____________________________________________________________
consensus GAGAAAGCGAGTACGGCGGCGAGTAAAGTAACGTAGTTGACGCGGAAGTATGAGAAGTTC
 
. : . : . : . : . : . :
JMFF027H21+ TTGCGCACGCGCGAGGCGGCCTCGGAGAGAGTGTCCGGCCGTCACCTCTGCCTTCTTGGA
JMFF006E18+ TTGCGCACGCGCGAGGCGGCCTCGGAGAGAGTGTCCGGCCGTCACCTCTGCCTTCTTGGA
                      ____________________________________________________________
consensus TTGCGCACGCGCGAGGCGGCCTCGGAGAGAGTGTCCGGCCGTCACCTCTGCCTTCTTGGA
 
. : . : . : . : . : . :
JMFF027H21+ CTTCTTTTCATCTTTTGTCTTCTTGATCCTTTCCTTAATTTCACGGAGAGCAGCCTCCCT
JMFF006E18+ CTTCTTTTCATCTTTTGTCTTCTTGATCCTTTCCTTAATTTCACGGAGAGCAGCCTCCCT
                      ____________________________________________________________
consensus CTTCTTTTCATCTTTTGTCTTCTTGATCCTTTCCTTAATTTCACGGAGAGCAGCCTCCCT
 
. : . : . : . : . : . :
JMFF027H21+ TGCAGCATCTCGGACTTCTGGTTTTTCACTTCTTTTCTTCTGGATTACCTCCAAGGTTGC
JMFF006E18+ TGCAGCATCTCGGACTTCTGGTTTTTCACTTCTTTTCTTCTGGATTACCTCCAAGGTTGC
                      ____________________________________________________________
consensus TGCAGCATCTCGGACTTCTGGTTTTTCACTTCTTTTCTTCTGGATTACCTCCAAGGTTGC
 
. : . : . : . : . : . :
JMFF027H21+ ACCAACAATAGATCTAGAGTAAGGCTTCTTTGCGGTCCTTCTCCTCTTCTTAACAGCCTC
JMFF006E18+ ACCAACAATAGATCTAGAGTAAGGCTTCTTTGCGGTCCTTCTCCTCTTCTTAACAGCCTC
                      ____________________________________________________________
consensus ACCAACAATAGATCTAGAGTAAGGCTTCTTTGCGGTCCTTCTCCTCTTCTTAACAGCCTC
 
. : . : . : . : . : . :
JMFF027H21+ TTGTGCAAGATCCTTCTTGTGCTGTTTCCTGTACACAGCAGTCCAAGTAAGCTTGGAAGG
JMFF006E18+ TTGTGCAAGATCCTTCTTGTGCTGTTTCCTGTACACAGCAGTCCAAGTAAGCTTGGAAGG
                      ____________________________________________________________
consensus TTGTGCAAGATCCTTCTTGTGCTGTTTCCTGTACACAGCAGTCCAAGTAAGCTTGGAAGG
 
. : . : . : . : . : . :
JMFF027H21+ TTTCAAACGGTTGTGAAAATACCTCTTGCATTTTGAATTGGCAAACAAGAAAACCTGAGA
JMFF006E18+ TTTCAAACGGTTGTGAAAATACCTCTTGCATTTTGAATTGGCAAACAAGAAAACCTGAGA
                      ____________________________________________________________
consensus TTTCAAACGGTTGTGAAAATACCTCTTGCATTTTGAATTGGCAAACAAGAAAACCTGAGA
 
. : . : . : . : . : . :
JMFF027H21+ ATCTGCACGGACAAATCTAATGCCCTTCCCAGGATATATCTTGGCACCACTGAAACGGCA
JMFF006E18+ ATCTGCACGGACAAATCTAATGCCCTTCCCAGGATATATCTTGGCACCACTGAAACGGCA
                      ____________________________________________________________
consensus ATCTGCACGGACAAATCTAATGCCCTTCCCAGGATATATCTTGGCACCACTGAAACGGCA
 
. : . : . : . : . : . :
JMFF027H21+ GAGTTCTGTCTTGAGAACCATGGCTGCTGAGAGCTGTGTTGGCGGTGTTGCTGTACCTCT
JMFF006E18+ GAGTTCTGTCTTGAGAACCATGGCTGCTGAGAGCTGTGTTGGCGGTGTTGCTGTACCTCT
                      ____________________________________________________________
consensus GAGTTCTGTCTTGAGAACCATGGCTGCTGAGAGCTGTGTTGGCGGTGTTGCTGTACCTCT