| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004N20 | Sequence | 485 | 008725 (8) | ref|XP_004246260.1| | 1e-22 | PREDICTED: probable phytol kinase 3, chloroplastic [Solanum lycopersicum] | 769 | 008725 (8) | ref|XP_009591334.1| | 1e-106 | PREDICTED: probable phytol kinase 3, chloroplastic [Nicotiana tomentosiformis] |
| JMFF006H05 | Sequence | 551 | 008725 (8) | ref|XP_009591334.1| | 6e-70 | PREDICTED: probable phytol kinase 3, chloroplastic [Nicotiana tomentosiformis] | 772 | 008725 (8) | ref|XP_009591334.1| | 6e-108 | PREDICTED: probable phytol kinase 3, chloroplastic [Nicotiana tomentosiformis] |
| JMFF015A20 | Sequence | 556 | 008725 (8) | ref|XP_009591334.1| | 2e-71 | PREDICTED: probable phytol kinase 3, chloroplastic [Nicotiana tomentosiformis] | |||||
| JMFF017L17 | Sequence | 556 | 008725 (8) | ref|XP_009591334.1| | 8e-52 | PREDICTED: probable phytol kinase 3, chloroplastic [Nicotiana tomentosiformis] | 772 | 008725 (8) | ref|XP_009591334.1| | 6e-108 | PREDICTED: probable phytol kinase 3, chloroplastic [Nicotiana tomentosiformis] |
| JMFF048A16 | Sequence | 339 | 008725 (8) | ref|XP_009591334.1| | 9e-37 | PREDICTED: probable phytol kinase 3, chloroplastic [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF004N20- TGAATGACT
rJMFF017L17- TGAATGACT
rJMFF006H05- TGAATGACT
____________________________________________________________
consensus TGAATGACT
. : . : . : . : . : . :
rJMFF004N20- GCAATAATGAAACAGATTATTCCATCATCAATTCGTTACATAACACCAATTTCAAGTCCA
rJMFF017L17- GCAATAATGAAACAGATTATTCCATCATCAATTCGTTACATAACACCAATTTCAAGTCCA
rJMFF006H05- GCAATAATGAAACAGATTATTCCATCATCAATTCGTTACATAACACCAATTTCAAGTCCA
____________________________________________________________
consensus GCAATAATGAAACAGATTATTCCATCATCAATTCGTTACATAACACCAATTTCAAGTCCA
. : . : . : . : . : . :
rJMFF004N20- AGTTAACAATCATCTAAACTTCTCAGAGTTTTCTCAAGATCAGTCTGCAGTCCTAGATCA
rJMFF017L17- AGTTAACAATCATCTAAACTTCTCAGAGTTTTCTCAAGATCAGTCTGCAGTCCTATATCA
rJMFF006H05- AGTTAACAATCATCTAAACTTCTCAGAGTTTTCTCAAGATCAGTCTGCAGTCCTAGATCA
____________________________________________________________
consensus AGTTAACAATCATCTAAACTTCTCAGAGTTTTCTCAAGATCAGTCTGCAGTCCTAGATCA
. : . : . : . : . : . :
rJMFF004N20- GAAAATGCAACTGCCCGCCAATACAGAGGCGAGGGGCACTGTCAGGTTGTCGTCCAGCTC
rJMFF017L17- GAAAATGCAACTGCCCGCCAATACAGAGGCGAGGGGCACTGTCAGGTTGTCGTCCAGCTC
rJMFF006H05- GAAAATGCAACTGCCCGCCAATACAGAGGCGAGGGGCACTGTCAGGTTGTCGTCCAGCTC
____________________________________________________________
consensus GAAAATGCAACTGCCCGCCAATACAGAGGCGAGGGGCACTGTCAGGTTGTCGTCCAGCTC
. : . : . : . : . : . :
rJMFF004N20- AGTGCTCAGCGGGTGAGATTCGACCAACGCTGCAGCGAGAGAGACAACCAAGAAACCAAG
rJMFF017L17- AGTGCTCAGCGGGTGAGATTCGACCAACGCTGCAGCGAGAGAGACAACCAAGAAACCAAG
rJMFF006H05- AGTGCTCAGCGGGTGAGATTCGACCAACGCTGCAGCGAGAGAGACAACCAAGAAACCAAG
____________________________________________________________
consensus AGTGCTCAGCGGGTGAGATTCGACCAACGCTGCAGCGAGAGAGACAACCAAGAAACCAAG
. : . : . : . : . : . :
rJMFF004N20- CACCATGTGTGGAGTCTTCTCGAGTTGCCCAAACGAGGAAAAATAGTGCATAAATCCGAT
rJMFF017L17- CACCATGTGTGGAGTCTTCTCGAGTTGCCCAAACGAGGAAAAATAGTGCATAAATCCGAT
rJMFF006H05- CACCATGTGTGGAGTCTTCTCGAGTTGCCCAAACGAGGAAAAATAGTGCATAAATCCGAT
____________________________________________________________
consensus CACCATGTGTGGAGTCTTCTCGAGTTGCCCAAACGAGGAAAAATAGTGCATAAATCCGAT
. : . : . : . : . : . :
rJMFF004N20- AGATGCTAGGAAACCGAAAGCTGCCATTGCAATACTACCAGCAAAGGATTTGTTCTTGTT
rJMFF017L17- AGATGCTAGGAAACCGAAAGCTGCCATTGCAATACTACCAGCAAAGGATTTGTTCTTGTT
rJMFF006H05- AGATGCTAGGAAACCGAAAGCTGCCATTGCAATACTACCAGCAAAGGATTTGTTCTTGTT
____________________________________________________________
consensus AGATGCTAGGAAACCGAAAGCTGCCATTGCAATACTACCAGCAAAGGATTTGTTCTTGTT
. : . : . : . : . : . :
rJMFF004N20- GTGGGGAAGCTTCGGGCTTCTGATCCTCCTGCCGATAATGTCAGCCATACCGTCACCAGC
rJMFF017L17- GTGGGGAAGCTTCGGGCTTCTGATCCTCCTGCCGATAATGTCAGCCATACCGTCACCAGC
rJMFF006H05- GTGGGGAAGCTTCGGGCTTCTGATCCTCCTGCCGATAATGTCAGCCATACCGTCACCAGC
JMFF006H05+ CCGATAATGTCAGCCATACCGTCACCAGC
JMFF015A20+ TCCTGCCGATAATGTCAGCCATACCGTCACCAGC
____________________________________________________________
consensus GTGGGGAAGCTTCGGGCTTCTGATCCTCCTGCCGATAATGTCAGCCATACCGTCACCAGC
. : . : . : . : . : . :
rJMFF004N20- ACAGAGGTTGCAAACTAGGGCAATTGCAATTGGGGAACTTCTCCAATAGACAGCACAAGC
rJMFF017L17- ACAGAGGTTGCAAACTAGGGCAATTGCAATTGGGGAACTTCTCCAATAGACAGCACAAGC
rJMFF006H05- ACAGAGGTTGCAAACTAGGGCAATTGCAATTGGGGAACTTCTCCAATAGACAGCACAAGC
JMFF006H05+ ACAGAGGTTGCAAACTAGGGCAATTGCAATTGGGGAACTTCTCCAATAGACAGCACAAGC
JMFF015A20+ ACAGAGGTTGCAAACTAGGGCAATTGCAATTGGGGAACTTCTCCAATAGACAGCACAAGC
JMFF017L17+ TAGACAGCACAAGC
____________________________________________________________
consensus ACAGAGGTTGCAAACTAGGGCAATTGCAATTGGGGAACTTCTCCAATAGACAGCACAAGC
. : . : . : . : . : . :
rJMFF004N20- CAAAGTGATTGTGATAGCATAGTATAGAGGCCCCTTCAGAAGTTCCCTGTAGTCTCCAAA
rJMFF017L17- CAAAGTGATTGTGATAGCATAGTATAGAGGCCCCTTCAGAAGTTCCCTGTAGTCTCCAAA
rJMFF006H05- CAAAGTGATTGTGATAGCATAGTATAGAGGCCCCTTCAGAAGTTCCCTGTAGTCTCCAAA
JMFF006H05+ CAAAGTGATTGTGATAGCATAGTATAGAGGCCCCTTCAGAAGTTCCCTGTAGTCTCCAAA
JMFF015A20+ CAAAGTGATTGTGATAGCATAGTATAGAGGCCCCTTCAGAAGTTCCCTGTAGTCTCCAAA
JMFF017L17+ CAAAGTGATTGTGATAGCATAGTATAGAGGCCCCTTCAGAAGTTCCCTGTAGTCTCCAAA
____________________________________________________________
consensus CAAAGTGATTGTGATAGCATAGTATAGAGGCCCCTTCAGAAGTTCCCTGTAGTCTCCAAA
. : . : . : . : . : . :
rJMFF004N20- TCTGCTCATAGACTTCACAGTTCCATCATCCTTCAATATCCCAAGACCCAAAAGCAGCAA
rJMFF017L17- TCTGCTCATAGACTTCACAGTTCCATCATCCTTCAATATCCCAAGACCCAAAAGCAGCAA
rJMFF006H05- TCTGCTCATAGACTTCACAGTTCCATCATCCTTCAATATCCCAAGACCCAAAAGCAGCAA
JMFF006H05+ TCTGCTCATAGACTTCACAGTTCCATCATCCTTCAATATCCCAAGACCCAAAAGCAGCAA
JMFF048A16+ CAA
JMFF015A20+ TCTGCTCATAGACTTCACAGTTCCATCATCCTTCAATATCCCAAGACCCAAAAGCAGCAA
JMFF017L17+ TCTGCTCATAGACTTCACAGTTCCATCATCCTTCAATATCCCAAGACCCAAAAGCAGCAA
____________________________________________________________
consensus TCTGCTCATAGACTTCACAGTTCCATCATCCTTCAATATCCCAAGACCCAAAAGCAGCAA
. : . : . : . : . : . :
rJMFF004N20- TTTGAATATGTTGAGTCCAGGAATAAGAGCTGCTACCAGTGCTCCTTGACGACCAGAACT
rJMFF017L17- TTTGAATATGTTGAGTCCAGGAATAAGAGCTGCTACCAGTGCTCCTTGACGACCAGAACT
rJMFF006H05- TTTGAATATGTTGAGTCCAGGAATAAGAGCTGCTACCAGTGCTCCTTGACGACCAGAACT
JMFF006H05+ TTTGAATATGTTGAGTCCAGGAATAAGAGCTGCTACCAGTGCTCCTTGACGACCAGAACT
JMFF048A16+ TTTGAATATGTTGAGTCCAGGAATAAGAGCTGCTACCAGTGCTCCTTGACGACCAGAACT
JMFF015A20+ TTTGAATATGTTGAGTCCAGGAATAAGAGCTGCTACCAGTGCTCCTTGACGACCAGAACT
JMFF017L17+ TTTGAATATGTTGAGTCCAGGAATAAGAGCTGCTACCAGTGCTCCTTGACGACCAGAACT
JMFF004N20+ GAACT
____________________________________________________________
consensus TTTGAATATGTTGAGTCCAGGAATAAGAGCTGCTACCAGTGCTCCTTGACGACCAGAACT
. : . : . : . : . : . :
rJMFF004N20- GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTCTATT
rJMFF017L17- GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTCTATT
rJMFF006H05- GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTCTATT
JMFF006H05+ GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTCTATT
JMFF048A16+ GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTCTATT
JMFF015A20+ GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTCTATT
JMFF017L17+ GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTCTATT
JMFF004N20+ GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTNTATT
____________________________________________________________
consensus GAACATTGGCCAGCAAAGCATGAAAACCATACCCATGCTAACATGAACCAGCTTTCTATT
. : . : . : . : . : . :
rJMFF004N20- CAGATTCTGATCAAAATATCCTCTTTTAGCAATCTCTTCC
rJMFF017L17- CAGATTCTGATCAAAATATCCTCTTTTAGCAATCTCTTCCCAG
rJMFF006H05- CAGATTCTGATCAAAATATCCTCTTTTAGCAATCTCTTCCCAG
JMFF006H05+ CAGATTCTGATCAAAATATCCTCTTTTAGCAATCTCTTCCCAGAACCGAAGACAGGAGAA
JMFF048A16+ CAGATTCTGATCAAAATATCCTCTTTTAGCAATCTCTTCCCAGAACCGAAGACAGGAGAA
JMFF015A20+ CAGATTCTGATCAAAATATCCTCTTTTAGCAATCTCTTCCCAGAACCGAAGACAGGAGAA
JMFF017L17+ CAGATTCTGATCAAAATATCCTCTTTTAGCAATCTCTTCCCAGAACCGAAGACAGGAGAA
JMFF004N20+ CAGATTNTGATCAAAATATCCTCTTTTAGCAATCTCTTCCCAGAACCGAAGACAGGAGAA
____________________________________________________________
consensus CAGATTCTGATCAAAATATCCTCTTTTAGCAATCTCTTCCCAGAACCGAAGACAGGAGAA
. : . : . : . : . : . :
JMFF006H05+ CGCGATGCCGCCGGACAACACGGAGGCGACGAGATCTCCGACGACAGGGTTCCCGGAAAA
JMFF048A16+ CGCGATGCCGCCGGACAACACGGAGGCGACGAGATCTCCGACGACAGGGTTCCCGGAAAA
JMFF015A20+ CGCGATGCCGCCGGACAACACGGAGGCGACGAGATCTCCGACGACAGGGTTCCCGGAAAA
JMFF017L17+ CGCGATGCCGCCGGACAACACGGAGGCGACGAGATCTCCGACGACAGGGTTCCCGGAAAA
JMFF004N20+ CGCGATGCCGCCGGACAACACGGAGGCGACGAGATCTCCGACGACAGGGTTCCCGGAAAA
____________________________________________________________
consensus CGCGATGCCGCCGGACAACACGGAGGCGACGAGATCTCCGACGACAGGGTTCCCGGAAAA
. : . : . : . : . : . :
JMFF006H05+ CATGGTCAAGCCAACAGCCTGAGACCTCACTTTTCGTCGTATTCTCCTCGTAATTGTCGT
JMFF048A16+ CATGGTCAAGCCAACAGCCTGAGACCTCACTTTTCGTCGTATTCTCCTCGTAATTGTCGT
JMFF015A20+ CATGGTCAAGCCAACAGCCTGAGACCTCACTTTTCGTCGTATTCTCCTCGTAATTGTCGT
JMFF017L17+ CATGGTCAAGCCAACAGCCTGAGACCTCACTTTTCGTCGTATTCTCCTCGTAATTGTCGT
JMFF004N20+ CATGGTCAAGCCAACAGCCTGAGACCTCACTTTTCGTCGTATTCTCCTCGTAATTGTCGT
____________________________________________________________
consensus CATGGTCAAGCCAACAGCCTGAGACCTCACTTTTCGTCGTATTCTCCTCGTAATTGTCGT
. : . : . : . : . : . :
JMFF006H05+ GTTCCGGAGCGTTGAGCTGGCGTGACAGTGGCACACTGAACT
JMFF048A16+ GTTCCGGAGCGTTGAGCTGGCGTGACAGTGGCACAC
JMFF015A20+ GTTCCGGAGCGTTGAGCTGGCGTGACAGTGGCACACTGAACT
JMFF017L17+ GTTCCGGAGCGTTGAGCTGGCGTGACAGTGGCACACTGAACTAGCTAACAGAGGAGGACT
JMFF004N20+ GTTCCGGAGCGTTGAGCTGGCGTGACAGTGGCACACTGAACTAGCTAACAGAGGAGGACT
____________________________________________________________
consensus GTTCCGGAGCGTTGAGCTGGCGTGACAGTGGCACACTGAACTAGCTAACAGAGGAGGACT
. : . : . : . : . : . :
JMFF017L17+ AAAATAGGTTAAAAAGTCTGACTTTGGGTTTACCAGAGAGAAAGGTGTAGGAATCACAGC
JMFF004N20+ AAAATAGGTTAAAAAGTCTGACTTTGGGTTTACCAGAGAGAAAGGTGTAGGAATCACAGC
____________________________________________________________
consensus AAAATAGGTTAAAAAGTCTGACTTTGGGTTTACCAGAGAGAAAGGTGTAGGAATCACAGC
. : . : . : . : . : . :
JMFF017L17+ AT
JMFF004N20+ ATAAGCAGCCATTCTGCATTTCACGCCAAACATATAATGCGGTGGTACAACGTTTGGTGA
____________________________________________________________
consensus ATAAGCAGCCATTCTGCATTTCACGCCAAACATATAATGCGGTGGTACAACGTTTGGTGA
. : . : . : . : . : . :
JMFF004N20+ CGGGCAGGTAATTCACGGCCGGCAGTTGGAACGAGAGTATTGGTCGCCTTTCCGGATACC
____________________________________________________________
consensus CGGGCAGGTAATTCACGGCCGGCAGTTGGAACGAGAGTATTGGTCGCCTTTCCGGATACC