| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002C04 | Sequence | 499 | 008723 (6) | ref|XP_009605268.1| | 1e-08 | PREDICTED: patatin-like protein 6 [Nicotiana tomentosiformis] | 736 | 002838 (4) | ref|XP_009764486.1| | 2e-150 | PREDICTED: patatin-like protein 6 [Nicotiana sylvestris] |
| JMFF004I17 | Sequence | 507 | 008723 (6) | ref|XP_009605268.1| | 1e-09 | PREDICTED: patatin-like protein 6 [Nicotiana tomentosiformis] | 727 | 002838 (4) | ref|XP_009764486.1| | 2e-148 | PREDICTED: patatin-like protein 6 [Nicotiana sylvestris] |
| JMFF007J05 | Sequence | 512 | 008723 (6) | ref|XP_009764486.1| | 2e-19 | PREDICTED: patatin-like protein 6 [Nicotiana sylvestris] | 200 | 002621 (2) | |||
| JMFF032F18 | Sequence | 574 | 008723 (6) | ref|XP_009764486.1| | 3e-78 | PREDICTED: patatin-like protein 6 [Nicotiana sylvestris] | 803 | 002621 (2) | |||
| JMFS008A10 | Sequence | 625 | 008723 (6) | ref|XP_009764486.1| | 7e-52 | PREDICTED: patatin-like protein 6 [Nicotiana sylvestris] | |||||
| JMFS101G12 | Sequence | 614 | 008723 (6) | ref|XP_009764486.1| | 2e-57 | PREDICTED: patatin-like protein 6 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF032F18+ GGAGAAGTAGAATACAGCTTCTT
____________________________________________________________
consensus GGAGAAGTAGAATACAGCTTCTT
. : . : . : . : . : . :
JMFF032F18+ CCCATTCTCAGCCAAAAACCTCCACGTGTCGTCGGCATTGAAAATAGGACGGCTCCTATC
____________________________________________________________
consensus CCCATTCTCAGCCAAAAACCTCCACGTGTCGTCGGCATTGAAAATAGGACGGCTCCTATC
. : . : . : . : . : . :
JMFF032F18+ CTTCGTCCTAAACAACATCGCCGTGAAAATCCCTCCGACGCCGGAGCCGGCAGCCACGTC
JMFS101G12+ ATCCCTCCGACGCCGGAGCCGGCAGCCACGTC
JMFS008A10+ CGGCAGCCACGTC
____________________________________________________________
consensus CTTCGTCCTAAACAACATCGCCGTGAAAATCCCTCCGACGCCGGAGCCGGCAGCCACGTC
. : . : . : . : . : . :
JMFF032F18+ AAAATAATCCGCGATTCGAGCCTCCGGATTCCCCGATTTCACCTTCAACGCCTGTTCCAA
JMFS101G12+ AAAATAATCCGCGATTCGAGCCTCCGGATTCCCCGATTTCACCTTCAACGCCTGTTCCAA
JMFS008A10+ AAAATAATCCGCGATTCGAGCCTCCGGATTCNCCGATTTCACCTTCAACGCCTGTTCCAA
____________________________________________________________
consensus AAAATAATCCGCGATTCGAGCCTCCGGATTCCCCGATTTCACCTTCAACGCCTGTTCCAA
. : . : . : . : . : . :
JMFF032F18+ ATACGCCAGCGCTTTCCCCGACAGAATCCCCCGCATTCCGCCGCCGTCAATCGTCAATAT
JMFS101G12+ ATACGCCAGCGCTTTCCCCGACAGAATCCCCCGCATTCCGCCGCCGTCAATCGTCAATAT
JMFS008A10+ ATACGCCAGCGCTTTCCCCGACAGAATCCCCCGCATTCCGCCGCCGTCAATCGTCAATAT
____________________________________________________________
consensus ATACGCCAGCGCTTTCCCCGACAGAATCCCCCGCATTCCGCCGCCGTCAATCGTCAATAT
. : . : . : . : . : . :
JMFF032F18+ ACAAATCTTCCCTCTCTGGCTTTTGATTGCTTGCACGTCATCGTTCCCGTCAACCTCCGG
JMFS101G12+ ACAAATCTTCCCTCTCTGGCTTTTGATTGCTTGCACGTCATCGTTCCCGTCAACCTCCGG
JMFS008A10+ ACAAATCTTCCCTCTCTGGCTTTTGATTGCTTGCACGTCATCGTTCCCGTCAACCTCCGG
JMFF007J05+ CTGGCTTTTGATTGCTTGCACGTCATCGTTCCCGTCAACCTCCGG
____________________________________________________________
consensus ACAAATCTTCCCTCTCTGGCTTTTGATTGCTTGCACGTCATCGTTCCCGTCAACCTCCGG
. : . : . : . : . : . :
JMFF032F18+ CAGCCCCGAAGCAACCTCGTTTTCGTCTCCCTCCACCGCCGGCGCGATGGTTTTCGGAAT
JMFS101G12+ CAGCCCCGAAGCAACCTCGTTTTCGTCTCCCTCCACCGCCGGCGCGATGGTTTTCGGAAT
JMFS008A10+ CAGCCCCGAAGCAACCTCGTTTTCGTCTCCCTCCACCGCCGGCGCGATGGTTTTCGGAAT
JMFF007J05+ CAGCCCCGAAGCAACCTCGTTTTCGTCTCCCTCCACCGCCGGCGCGATGGTTTTCGGAAT
JMFF002C04+ CGGCGCGATGGTTTTCGGAAT
JMFF004I17+ TCCACCGCCGGCGCGATGGTTTTCGGAAT
____________________________________________________________
consensus CAGCCCCGAAGCAACCTCGTTTTCGTCTCCCTCCACCGCCGGCGCGATGGTTTTCGGAAT
. : . : . : . : . : . :
JMFF032F18+ CCAAAGCTTCTGATCATCGTAACCGAACAAAAACTTACTCTCCAGTATAGAAAAGATCTC
JMFS101G12+ CCAAAGCTTCTGATCATCGTAACCGAACAAAAACTTACTCTCCAGTATAGAAAAGATCTC
JMFS008A10+ CCAAAGCTTCTGATCATCGTAACCGAACAAAAACTTACTCTCCAGTATAGAAAAGATCTC
JMFF007J05+ CCAAAGCTTCTGATCATCGTAACCGAACAAAAACTTACTCTCCAGTATAGAAAAGATCTC
JMFF002C04+ CCAAAGCTTCTGATCATCGTAACCGAACAAAAACTTACTCTCCAG--TAGAAAAGATCTC
JMFF004I17+ CCAAAGCTTCTGATCATCGTAACCGAACAAAAACTTACTCTCCAG--TAGAAAAGATCTC
____________________________________________________________
consensus CCAAAGCTTCTGATCATCGTAACCGAACAAAAACTTACTCTCCAGTATAGAAAAGATCTC
. : . : . : . : . : . :
JMFF032F18+ GTAACTCAGCTTATCCGTATCTATACTAGGCTCCTCCTCCGTAATCAAACCTTGAGCAAC
JMFS101G12+ GTAACTCAGCTTATCCGTATCTATACTAGGCTCCTCCTCCGTAATCAAACCTTGAACAAC
JMFS008A10+ GTAACTCAGCTTATCCGTATCTATACTAGGCTCCTCCTCCGTAATCAAACCTTGAACAAC
JMFF007J05+ GTAACTCAGCTTATCCGTATCTATACTAGGCTCCTCCTCCGTAATCAAACCTTGAACAAC
JMFF002C04+ GTAACTCAGCTTATCCGTATCTATACTAGGCTCCTCCTCCGTAATCAAACCTTGAACAAC
JMFF004I17+ GTAACTCAGCTTATCCGTATCTATACTAGGCTCCTCCTCCGTAATCAAACCTTGAACAAC
____________________________________________________________
consensus GTAACTCAGCTTATCCGTATCTATACTAGGCTCCTCCTCCGTAATCAAACCTTGAACAAC
. : . : . : . : . : . :
JMFF032F18+ ATTCCGATGAGTCCCCGCCATTTTATCGCCAGAATTCAAAAAACTTCTAACAAACCTCAC
JMFS101G12+ ATTCCGATGAGTCCCCGCCATTTTATCGCCAGAATTCAAAAAACTTCTAACAAACCTCAC
JMFS008A10+ ATTCCGATGAGTCCCCGCCATTTTATCGCCAGAATTCAAAAAACTTCTAACAAACCTCAC
JMFF007J05+ ATTCCGATGAGTCCCCGCCATTTTATCGCCAGAATTCAAAAAACTTCTAACAAACCTCAC
JMFF002C04+ ATTCCGATGAGTCCCCGCCATTTTATCGCCAGAATTCAAAAAACTTCTAACAAACCTCAC
JMFF004I17+ ATTCCGATGAGTCCCCGCCATTTTATCGCCAGAATTCAAAAAACTTCTAACAAACCTCAC
____________________________________________________________
consensus ATTCCGATGAGTCCCCGCCATTTTATCGCCAGAATTCAAAAAACTTCTAACAAACCTCAC
. : . : . : . : . : . :
JMFF032F18+ CTCACCTC
JMFS101G12+ CTCACCTCATAAACTCAAACAGTCTACAGTAGTGTTTTTAGAGATAGAAATCAAACAAAC
JMFS008A10+ CTCACCTCATAAACTCAAACAGTCTACAGTAGTGTTTTTAGAGATAGAAATCAAACAAAC
JMFF007J05+ CTCACCTCATAAACTCAAACAGTCTACAGTAGTGTTTTTAGAGATAGAAATCAAACAAAC
JMFF002C04+ CTCACCTCATAAACTCAAACAGTCTACAGTAGTGTTTTTAGAGATAGAAATCAAACAAAC
JMFF004I17+ CTCACCTCATAAACTCAAACAGTCTACAGTAGTGTTTTTAGAGATAGAAATCAAACAAAC
____________________________________________________________
consensus CTCACCTCATAAACTCAAACAGTCTACAGTAGTGTTTTTAGAGATAGAAATCAAACAAAC
. : . : . : . : . : . :
JMFS101G12+ ACCCATTTCTCCATGTCCACAGTGCACACAAGATGTTCGGTATATATACAGAGAGTAGAG
JMFS008A10+ ACCCATTTCTCCATGTCCACAGTGCACACAAGATGTTCGGTATATATACAGAGAGTAGAG
JMFF007J05+ ACCCATTTCTCCATGTCCACAGTGCACACAAGATGTTCGGTATATATACAGAGAGTAGAG
JMFF002C04+ ACCCATTTCTCCATGTCCACAGTGCACACAAGATGTTCGGTATATATACAGAGAGTAGAG
JMFF004I17+ ACCCATTTCTCCATGTCCACAGTGCACACAAGATGTTCGGTATATATACAGAGAGTAGAG
____________________________________________________________
consensus ACCCATTTCTCCATGTCCACAGTGCACACAAGATGTTCGGTATATATACAGAGAGTAGAG
. : . : . : . : . : . :
JMFS101G12+ AGAGAAAAAGAAATAGAAGACGTCAAGGGAGGGAGGAAGGAA
JMFS008A10+ AGAGAAAAAGAAATAGAAGACGTCAAGGGAGGGAGGAAGGAAGGATAATAAGCGATGGAA
JMFF007J05+ AGAGAAAAAGAAATAGAAGACGTCAAGGGAGGGAGGAAGGAAGGATAATAAGCGATGGAA
JMFF002C04+ AGAGAAAAAGAAATAGAAGACGTCAAGGGAGGGAGGAAGGAAGGATAATAAGCGATGGAA
JMFF004I17+ AGAGAAAAAGAAATAGAAGACGTCAAGGGAGGGAGGAAGGAAGGATAATAAGCGATGGAA
____________________________________________________________
consensus AGAGAAAAAGAAATAGAAGACGTCAAGGGAGGGAGGAAGGAAGGATAATAAGCGATGGAA
. : . : . : . : . : . :
JMFS008A10+ GCAAGAAAGGAA
JMFF007J05+ GCAAGAAAGGAAGAAGAAGAAAATGACAAAGGGTGGTAACAGCAAAT
JMFF002C04+ GCAAGAAAGGAAGAAGAAGAAAATGACAAAGGGTGGTAACAGCAAATGGCAGAGCAGTTG
JMFF004I17+ GCAAGAAAGGAAGAAGAAGAAAATGACAAAGGGTGGTAACAGCAAATGGCAGAGCAGTTG
____________________________________________________________
consensus GCAAGAAAGGAAGAAGAAGAAAATGACAAAGGGTGGTAACAGCAAATGGCAGAGCAGTTG
. : . : . : . : . : . :
JMFF002C04+ CAGAGCATGTCTGTTATGAAGACGCCATTTCTATTAATTATGCATGTAATTTCTCCCAAT
JMFF004I17+ CAGAGCATGTCTGTTATGAAGACGCCATTTCTATTAATTATGCATGTAATTTCTCCCAAT
____________________________________________________________
consensus CAGAGCATGTCTGTTATGAAGACGCCATTTCTATTAATTATGCATGTAATTTCTCCCAAT