Contig 008716:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050A23+                                   ATNTGATTCATCTTTAGAATCTTCAGTGTTTCCTAA
                      ____________________________________________________________
consensus                                     ATNTGATTCATCTTTAGAATCTTCAGTGTTTCCTAA
 
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JMSF050A23+           CAAACTNTTCTTNTTATCTGCTTTTGACTTGGGCAAATATGTAACAACAGGATGTGTTCT
                      ____________________________________________________________
consensus             CAAACTNTTCTTNTTATCTGCTTTTGACTTGGGCAAATATGTAACAACAGGATGTGTTCT
 
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JMSF050A23+           TCCAAATGCTGCCAACGGCTGGTACTCTGGATCACTGGGATCTGGAGGATATCCAGAGCG
                      ____________________________________________________________
consensus             TCCAAATGCTGCCAACGGCTGGTACTCTGGATCACTGGGATCTGGAGGATATCCAGAGCG
 
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JMSF050A23+           AGCAAAGAAAACATGAGCATAGAGACTGCCATTGTGCTTCAAAGCCTCAGATGGAAAATA
                      ____________________________________________________________
consensus             AGCAAAGAAAACATGAGCATAGAGACTGCCATTGTGCTTCAAAGCCTCAGATGGAAAATA
 
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JMSF050A23+           CTTCAAAGAAAGTGACCTTGAGCTTTCATGTCCCCAAACAGCATAAGGTATATTTGTCTC
                      ____________________________________________________________
consensus             CTTCAAAGAAAGTGACCTTGAGCTTTCATGTCCCCAAACAGCATAAGGTATATTTGTCTC
 
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JMSF050A23+           ATGCCAAAAGAGCGCAGTTTCACTCCCAAAGTCATTGAACTTCTCTTGTTCAGAGAGATA
                      ____________________________________________________________
consensus             ATGCCAAAAGAGCGCAGTTTCACTCCCAAAGTCATTGAACTTCTCTTGTTCAGAGAGATA
 
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JMSF050A23+           CAACCACATGTCCAAGGGTTCGCCTTTGTGGAAGAGATTGGAGATCTGGACAGAAGGATC
                      ____________________________________________________________
consensus             CAACCACATGTCCAAGGGTTCGCCTTTGTGGAAGAGATTGGAGATCTGGACAGAAGGATC
 
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JMSF050A23+           GGAAGGGGCGCGTTTGGGGGAGAAGAACTTTGATGCGAAGTACCAGAATATAGCCATTCT
                      ____________________________________________________________
consensus             GGAAGGGGCGCGTTTGGGGGAGAAGAACTTTGATGCGAAGTACCAGAATATAGCCATTCT
 
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JMSF050A23+           AATTACCCCCGTCAACATCTGCCCCATCCCCGGCTGCTGTTGTTGCTGCTGCCTTCCTCC
JMSF030L10+                                                             GCCTTCCTCC
                      ____________________________________________________________
consensus             AATTACCCCCGTCAACATCTGCCCCATCCCCGGCTGCTGTTGTTGCTGCTGCCTTCCTCC
 
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JMSF050A23+           TCCTCCTCCTCCTCCTCCACCACCGTCGCCTCCATCTCCGGCAACTGGCGGCGCCATCCT
JMSF030L10+           TCCTCCTCCTCCTCCTCCACCACCGTCGCCTCCATCTCCGGCAACTGGCGGCGCCATCCT
                      ____________________________________________________________
consensus             TCCTCCTCCTCCTCCTCCACCACCGTCGCCTCCATCTCCGGCAACTGGCGGCGCCATCCT
 
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JMSF050A23+           CTCGACTACTAACTCCGAAGCCTTATCACTACCGTTTGCGCGCGTCCAAAGTCGGAAAAG
JMSF030L10+           CTCGACTACTAACTCCGAAGCCTTATCANTACCGTTTGCGCGCGTCCAAAGTCGGAAAAG
JMFF003D10+                   CTAACTCCGAAGCCTTATCNCTNCCGTTTGCGNGCGTCCAAAGTNGGAAAAG
                      ____________________________________________________________
consensus             CTCGACTACTAACTCCGAAGCCTTATCACTACCGTTTGCGCGCGTCCAAAGTCGGAAAAG
 
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JMSF050A23+           CAAGTGCAAATCGGCGAACTT                                       
JMSF030L10+           CAAGTGCAAATCGGCGAACTTCGATGTATACTAGAACGAAAAAGATAGTTAAAGGCTTAA
JMFF003D10+           CAAGNGCAAATCGGNGAACTTNGATGTATNCTAGAACGAAAAAGATAGTTAAAGGCTTAA
                      ____________________________________________________________
consensus             CAAGTGCAAATCGGCGAACTTCGATGTATACTAGAACGAAAAAGATAGTTAAAGGCTTAA
 
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JMSF030L10+           AGCACCAGTGGTATACTTGTATTGGGAATCATTAGAGCGGTGGACACGCGAGTTTGCAAC
JMFF003D10+           AGCCCCNGTGGTATACTTGTATTGGGAATCNTTAGAGCGGNGGNCNCGCGAGTTTGCAAC
                      ____________________________________________________________
consensus             AGCCCCAGTGGTATACTTGTATTGGGAATCATTAGAGCGGTGGACACGCGAGTTTGCAAC
 
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JMSF030L10+           TAGAACAAAT                                                  
JMFF003D10+           TAGAACAAATGGNCAANGNCTGCCAGATATTTTCCCCAAGTTTGTATTTNTGCCCTAATT
                      ____________________________________________________________
consensus             TAGAACAAATGGNCAANGNCTGCCAGATATTTTCCCCAAGTTTGTATTTNTGCCCTAATT
 
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JMFF003D10+           TTTTTGAAAAAAAAAAATAAAATCTGATCATCTTTGTTGAGATTTTTTTTCTATCTTAGT
                      ____________________________________________________________
consensus             TTTTTGAAAAAAAAAAATAAAATCTGATCATCTTTGTTGAGATTTTTTTTCTATCTTAGT