Contig 008711:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C23Sequence495008711 (2)ref|XP_009761175.1|5e-21PREDICTED: SNAP25 homologous protein SNAP33 [Nicotiana sylvestris]723001334 (2)ref|XP_009761175.1|3e-107PREDICTED: SNAP25 homologous protein SNAP33 [Nicotiana sylvestris]
JMSF017F17Sequence469008711 (2)ref|XP_009761175.1|1e-19PREDICTED: SNAP25 homologous protein SNAP33 [Nicotiana sylvestris]807001334 (2)ref|XP_009761175.1|7e-119PREDICTED: SNAP25 homologous protein SNAP33 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF017F17+ CTGAAATCA
JMFF002C23+ GAATCTCTGAAATCA
                      ____________________________________________________________
consensus GAATCTCTGAAATCA
 
. : . : . : . : . : . :
JMSF017F17+ TTCTTGTACCTGTTTCTCTCGGTTGTAAAGGAGTATGTGGATGAGGACGAGGACGATGAT
JMFF002C23+ TTCTTGTACCTGTTTCTCTCGGTTGTAAAGGAGTATGTGGATGAGGACGAGGACGATGAT
                      ____________________________________________________________
consensus TTCTTGTACCTGTTTCTCTCGGTTGTAAAGGAGTATGTGGATGAGGACGAGGACGATGAT
 
. : . : . : . : . : . :
JMSF017F17+ TTCCCTTTAGCTTCATCATCATCAAAGGGGTTAGTACTAGTATTCAGAGTAACAGGAGTA
JMFF002C23+ TTCCCTTTAGCTTCATCATCATCAAAGGGGTTAGTACTAGTATTCAGAGTAACAGGAGTA
                      ____________________________________________________________
consensus TTCCCTTTAGCTTCATCATCATCAAAGGGGTTAGTACTAGTATTCAGAGTAACAGGAGTA
 
. : . : . : . : . : . :
JMSF017F17+ GGCTCGGAAGAAGTCCTCGATTGCTTAACATTCTGCTTCTTATCACACTCATCGTCAGAA
JMFF002C23+ GGCTCGGAAGAAGTCCTCGATTGCTTAACATTCTGCTTCTTATCACACTCATCGTCAGAA
                      ____________________________________________________________
consensus GGCTCGGAAGAAGTCCTCGATTGCTTAACATTCTGCTTCTTATCACACTCATCGTCAGAA
 
. : . : . : . : . : . :
JMSF017F17+ TCAAAAGGGTTTGAAGTCGAGTTAGATCCAGGAACGATGGAGTGGCTCTTAGAATTCCCA
JMFF002C23+ TCAAAAGGGTTTGAAGTCGAGTTAGATCCAGGAACGATGGAGTGGCTCTTAGAATTCCCA
                      ____________________________________________________________
consensus TCAAAAGGGTTTGAAGTCGAGTTAGATCCAGGAACGATGGAGTGGCTCTTAGAATTCCCA
 
. : . : . : . : . : . :
JMSF017F17+ TGCAAAGGGGACTTCTTATGACCAAACATTTTCAGTTACAATATATTCAGGATCAGATTG
JMFF002C23+ TGCAAAGGGGACTTCTTATGACCAAACATTTTCAGTTACAATATATTCAGGATCAGATTG
                      ____________________________________________________________
consensus TGCAAAGGGGACTTCTTATGACCAAACATTTTCAGTTACAATATATTCAGGATCAGATTG
 
. : . : . : . : . : . :
JMSF017F17+ GAGTACTGGACTGTCACTAGTACTCAAAGAAGATATCTGAGAATCCGAAGAAGTAAACCT
JMFF002C23+ GAGTACTGGACTGTCACTAGTACTCAAAGAAGATATCTGAGAATCCGAAGAAGTAAACCT
                      ____________________________________________________________
consensus GAGTACTGGACTGTCACTAGTACTCAAAGAAGATATCTGAGAATCCGAAGAAGTAAACCT
 
. : . : . : . : . : . :
JMSF017F17+ ATGGATTAACGCCTCCAGTCCTCCACTCTCAACAATGGGAGAAAAGCTAGACGACTGACT
JMFF002C23+ ATGGATTAACGCCTCCAGTCCTCCACTCTCAACAATGGGAGAAAAGCTAGACGACTGACT
                      ____________________________________________________________
consensus ATGGATTAACGCCTCCAGTCCTCCACTCTCAACAATGGGAGAAAAGCTAGACGACTGACT
 
. : . : . : . : . : . :
JMSF017F17+ TTGGATGCTAAAATTCAAGATGATGGAAACGTCTATATG
JMFF002C23+ TTGGATGCTAAAATTCAAGATGATGGAAACGTCTATATGGGCGATATCCTAGGAGGAGTT
                      ____________________________________________________________
consensus TTGGATGCTAAAATTCAAGATGATGGAAACGTCTATATGGGCGATATCCTAGGAGGAGTT