| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001P14 | Sequence | 611 | 008710 (4) | gb|EYU37517.1| | 2e-07 | hypothetical protein MIMGU_mgv11b017514mg [Erythranthe guttata] | 622 | 004105 (2) | ref|XP_006361242.1| | 1e-38 | PREDICTED: cyclin-dependent kinase F-4-like isoform X1 [Solanum tuberosum] |
| JMFF043G04 | Sequence | 618 | 008710 (4) | gb|EYU37517.1| | 3e-07 | hypothetical protein MIMGU_mgv11b017514mg [Erythranthe guttata] | 598 | 004105 (2) | ref|XP_006361244.1| | 4e-28 | PREDICTED: cyclin-dependent kinase F-4-like isoform X3 [Solanum tuberosum] |
| JMFS126A05 | Sequence | 637 | 008710 (4) | gb|KJB21194.1| | 4e-13 | hypothetical protein B456_003G187000 [Gossypium raimondii] | |||||
| JMFS140C11 | Sequence | 626 | 008710 (4) | gb|EYU37517.1| | 2e-14 | hypothetical protein MIMGU_mgv11b017514mg [Erythranthe guttata] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS126A05+ AATG
JMFS140C11+ G
____________________________________________________________
consensus AATG
. : . : . : . : . : . :
JMFS126A05+ TGATCCTTCAGTCAAGCGAATTGGTTAACTTGCACCAGGCACCTGTCTAGCGAAAATGCC
JMFS140C11+ TGATCCTTCAGTCAAGCGAATTGGTTAACTTGCACCAGGCACCTGTCTAGCGAAAATGCC
JMFF043G04+ AGCGAAAATGCC
JMFF001P14+ AGCGAAAATGCC
____________________________________________________________
consensus TGATCCTTCAGTCAAGCGAATTGGTTAACTTGCACCAGGCACCTGTCTAGCGAAAATGCC
. : . : . : . : . : . :
JMFS126A05+ AAGATGTGTATAAAAACTACCAACTCTAAGAAAGAGTGCAACAGTCAATCTAACTCTTCA
JMFS140C11+ AAGATGTGTATAAAAACTACCAACTCTAAGAAAGAGTGCAACAGTCAATCTAACTCTTCA
JMFF043G04+ AAGATGTGTATAAAAACTACCAACTCTAAGAAAGAGTGCAACAGTCAATCTAACTCTTCA
JMFF001P14+ AAGATGTGTATAAAAACTACCAACTNTAAGAAAGAGTGCAACAGTCAATCTAACTCTTCA
____________________________________________________________
consensus AAGATGTGTATAAAAACTACCAACTCTAAGAAAGAGTGCAACAGTCAATCTAACTCTTCA
. : . : . : . : . : . :
JMFS126A05+ ATGATGTTCAGAAACATCATCCATTTGCTCACAGAATATAGCCCTCATGTGAAGGGTTCC
JMFS140C11+ ATGATGTTCAGAAACATCATCCATTTGCTCACAGAATATAGCCCTCATGTGAAGGGTTCC
JMFF043G04+ ATGATGTTCAGAAACATCATCCATTTGCTCACAGAATATAGCCCTCATGTGAAGGGTTCC
JMFF001P14+ ATGATGTTCAGAAACATCATCCATTTGCTCACAGAATATAGCCCTCATGTGAAGGGTTCC
____________________________________________________________
consensus ATGATGTTCAGAAACATCATCCATTTGCTCACAGAATATAGCCCTCATGTGAAGGGTTCC
. : . : . : . : . : . :
JMFS126A05+ AAATGATCTCAAATGGGTGGTGTATCAGAAATCACTAGCAACACTGAAATTGCATGAGTT
JMFS140C11+ AAATGATCTCAAATGGGTGGTGTATCAGAAATCACTAGCAACACTGAAATTGCATGAGTT
JMFF043G04+ AAATGATCTCAAATGGGTGGTGTATCAGAAATCACTAGCAACACTGAAATTGCATGAGTT
JMFF001P14+ AAATGATCTCAAATGGGTGGTGTATCAGAAATCACTAGCAACACTGAAATTGCATGAGTT
____________________________________________________________
consensus AAATGATCTCAAATGGGTGGTGTATCAGAAATCACTAGCAACACTGAAATTGCATGAGTT
. : . : . : . : . : . :
JMFS126A05+ AACAGTATAGTCACAACTGACATCATAACAAGGTATGCAGTTTGTCAAATTGCATAAAAG
JMFS140C11+ AACAGTATAGTCACAACTGACATCATAACAAGGTATGCAGTTTGTCAAATTGCATAAAAG
JMFF043G04+ AACAGTATAGTCACAACTGACATCATAACAAGGTATGCAGTTTGTCAAATTGCATAAAAG
JMFF001P14+ AACAGTATAGTCACAACTGACATCATAACAAGGTATGCAGTTTGTCAAATTGCATAAAAG
____________________________________________________________
consensus AACAGTATAGTCACAACTGACATCATAACAAGGTATGCAGTTTGTCAAATTGCATAAAAG
. : . : . : . : . : . :
JMFS126A05+ ATCCAATGTCTATTTTATAAAGAATTTGCAGTCGGCATCCTGAACTGATCATTCAAGAAA
JMFS140C11+ ATCCAATGTCTATTTTATAAAGAATTTGCAGTCGGCATCCTGAACTGATCATTCAAGAAA
JMFF043G04+ ATCCAATGTCTATTTTATAAGGAATTTGCAGTCGGCATCCTGAACTGATCATTCAAGAAA
JMFF001P14+ ATCCAATGTCTATTTTATAAGGAATTTGCAGTCGGCATCCTGAACTGATCATTCAAGAAA
____________________________________________________________
consensus ATCCAATGTCTATTTTATAAGGAATTTGCAGTCGGCATCCTGAACTGATCATTCAAGAAA
. : . : . : . : . : . :
JMFS126A05+ GGCTCCTCACTAAGTGCAATTGACAAAGGAAACGAGAAGAAAATCCACATGGATGAGAAA
JMFS140C11+ GGCTCCTCACTAAGTGCAATTGACAAAGGAAACGAGAAGAAAATCCACATGGATGAGAAA
JMFF043G04+ GGCTCCTCACTAAGTGCAATTGACAAAGGAAACGAGAAGAAAATCCACATGGATGAG-AA
JMFF001P14+ GGCTCCTCACTAAGTGCAATTGACAAAGGAAACGAGAAGAAAATCCACATGGATGAG-AA
____________________________________________________________
consensus GGCTCCTCACTAAGTGCAATTGACAAAGGAAACGAGAAGAAAATCCACATGGATGAGAAA
. : . : . : . : . : . :
JMFS126A05+ CCGTTCATCAAGCACTTTTTGGAATGATAACACTTGATACAGATAGCAATCTGACCAAAG
JMFS140C11+ CCGTTCATCAAGCACTTTTTGGAATGATAACACTTGATACAGATAGCAATCTGACCAAAG
JMFF043G04+ CCGTTCATCAAGCACTTTTTGGAATGATAACACTTGATACAGATAGCAATCTGACCAAAG
JMFF001P14+ CCGTTCATCAAGCACTTTTTGGAATGATAACACTTGATACAGATAGCAATCTGACCAAAG
____________________________________________________________
consensus CCGTTCATCAAGCACTTTTTGGAATGATAACACTTGATACAGATAGCAATCTGACCAAAG
. : . : . : . : . : . :
JMFS126A05+ GCATATTTGCTCCATGTCCTAAGTGATATTAATCCCTTGGAATTGAAGTCTAACAA
JMFS140C11+ GCATATTTGCTCCATGTCCTAAGTGATATTAATCCCTTGGAATTGAAGTCTAACAAAACC
JMFF043G04+ GCATATTTGCTCCATGTCCTAAGTGATATTAATCCCTTGGAATTGAAGTCTAACAAAACC
JMFF001P14+ GCATATTTGCTCCATGTCCTAAGTGATATTAATCCCTTGGAATTGAAGTCTAACAAAACC
____________________________________________________________
consensus GCATATTTGCTCCATGTCCTAAGTGATATTAATCCCTTGGAATTGAAGTCTAACAAAACC
. : . : . : . : . : . :
JMFS140C11+ TGAGGGGGTAACGGCATAACCTAAGCGAGCCA
JMFF043G04+ TGAGGGGGTAACGGCATAACCTAAGCGAGCCAATGCGGAGATTATCGACAACTCCAGTGT
JMFF001P14+ TGAGGGGGTAACGGCATAACCTAAGCGAGCCAATGCGGAGATTATCGACAACTCCAGTGT
____________________________________________________________
consensus TGAGGGGGTAACGGCATAACCTAAGCGAGCCAATGCGGAGATTATCGACAACTCCAGTGT
. : . : . : . : . : . :
JMFF043G04+ ACCCAAAATCCTAATGTGAATAAATGTGAATAACGTTGTTTATATTCTACGAATTT
JMFF001P14+ ACCCAAAATCCTAATGTGAATAAATGTGAATAACGTTGTTTATATTCTACGAATTTCTGC
____________________________________________________________
consensus ACCCAAAATCCTAATGTGAATAAATGTGAATAACGTTGTTTATATTCTACGAATTTCTGC