Contig 008709:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001O14Sequence598008709 (4)gb|KDO77195.1|2e-11hypothetical protein CISIN_1g033622mg [Citrus sinensis]
JMSF001C02Sequence355008709 (4)gb|KDO77195.1|5e-12hypothetical protein CISIN_1g033622mg [Citrus sinensis]533008709 (4)gb|KDO77195.1|1e-11hypothetical protein CISIN_1g033622mg [Citrus sinensis]
JMSF033L20Sequence629008709 (4)gb|KDO77195.1|2e-11hypothetical protein CISIN_1g033622mg [Citrus sinensis]615007046 (4)ref|XP_006351434.1|1e-98PREDICTED: leucine-rich repeat receptor-like serine/threonine/tyrosine-protein

Alignment

This contig is upended


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JMSF033L20+                   GCAAGGAGGGGAAAGATAAGCATATAAATTTTCAAACACTAATATCTTACAC
                      ____________________________________________________________
consensus                     GCAAGGAGGGGAAAGATAAGCATATAAATTTTCAAACACTAATATCTTACAC
 
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rJMSF001C02-                                                 TAGTGAAGTCAAGGAAGCCAT
JMSF033L20+           AACACATTTTAATTTATAAAAAATAAATACTCCTAATAATAGTGAAGTCAAGGAAGCCAT
JMFF001O14+             CACATTTTAATTTATAAAAAATAAATACTCCTAATAATAGTGAAGTCAAGGAAGCCAT
                      ____________________________________________________________
consensus             AACACATTTTAATTTATAAAAAATAAATACTCCTAATAATAGTGAAGTCAAGGAAGCCAT
 
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rJMSF001C02-          AACACAAGATGCTAGTATAGGAACAAGCATCAAAATTGAAGTTCACATAATTGAGGGGGT
JMSF033L20+           AACACAAGATGCTAGTATAGGAACAAGCATCAAAATTGAAGTTCACATAATTGAGGGGGT
JMFF001O14+           AACACAAGATGCTAGTATAGGAACAAGCATCAAAATTGAAGTTCACATAATTGAGGGGGT
                      ____________________________________________________________
consensus             AACACAAGATGCTAGTATAGGAACAAGCATCAAAATTGAAGTTCACATAATTGAGGGGGT
 
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rJMSF001C02-          TCACACATGTCTCTTCTTAAGCTTGCCCTTTCCATAGCCTTTCTTTTTAGCCAACTTCAT
JMSF033L20+           TCACACATGTCTCTTCTTAAGCTTGCCCTTTCCATAGCCTTTCTTTTTAGCCAACTTCAT
JMFF001O14+           TCACACATGTCTCTTCTTAAGCTTGCCCTTTCCATAGCCTTTCTTTTTAGCCAACTTCAT
                      ____________________________________________________________
consensus             TCACACATGTCTCTTCTTAAGCTTGCCCTTTCCATAGCCTTTCTTTTTAGCCAACTTCAT
 
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rJMSF001C02-          CTTCTTTTTCATCTTCTTTCCAATCGGTTTCAAAGATTTCATACCTTGGGTGTCGTCATC
JMSF001C02+                                                TTCATACCTTGGGTGTCGTCATC
JMSF033L20+           CTTCTTTTTCATCTTCTTTCCAATCGGTTTCAAAGATTTCATACCTTGGGTGTCGTCATC
JMFF001O14+           CTTCTTTTTCATCTTCTTTCCAATCGGTTTCAAAGATTTCATACCTTGGGTGTCGTCATC
                      ____________________________________________________________
consensus             CTTCTTTTTCATCTTCTTTCCAATCGGTTTCAAAGATTTCATACCTTGGGTGTCGTCATC
 
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rJMSF001C02-          CATCTCAACATCCATATTGTTATCCTTGTCGATAGAGGTGGTTGGAGCCGGTTCTATAGA
JMSF001C02+           CATCTCAACATCCATATTGTTATCCTTGTCGATAGAGGTGGTTGGAGCCGGTTCTATAGA
JMSF033L20+           CATCTCAACATCCATATTGTTATCCTTGTCGATAGAGGTGGTTGGAGCCGGTTCTATAGA
JMFF001O14+           CATCTCAACATCCATATTGTTATCCTTGTCGATAGAGGTGGTTGGAGCCGGTTCTATAGA
                      ____________________________________________________________
consensus             CATCTCAACATCCATATTGTTATCCTTGTCGATAGAGGTGGTTGGAGCCGGTTCTATAGA
 
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rJMSF001C02-          CATAGCCGTGGTTCTATTCGTGGTGGATTGGGAGCGAACGGGAACCTTAGGGGCAGCAAG
JMSF001C02+           CATAGCCGTGGTTCTATTCGTGGTGGATTGGGAGCGAACGGGAACCTTAGGGGCAGCAAG
JMSF033L20+           CATAGCCGTGGTTCTATTCGTGGTGGATTGGGAGCGAACGGGAACCTTAGGGGCAGCAAG
JMFF001O14+           CATAGCCGTGGTTCTATTCGTGGTGGATTGGGAGCGAACGGGAACCTTAGGGGCAGCAAG
                      ____________________________________________________________
consensus             CATAGCCGTGGTTCTATTCGTGGTGGATTGGGAGCGAACGGGAACCTTAGGGGCAGCAAG
 
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rJMSF001C02-          GGCAGCCTCTTGGGCAGCGAGCTTGGCGTCCTCTTTCTTTTGGGTGATAGGATCCGCAGA
JMSF001C02+           GGCAGCCTCTTGGGCAGCGAGCTTGGCGTCCTCTTTCTTTTGGGTGATAGGATCCGCAGA
JMSF033L20+           GGCAGCCTCTTGGGCAGCGAGCTTGGCGTCCTCTTTCTTTTGGGTGATAGGATCCGCAGA
JMFF001O14+           GGCAGCCTCTTGGGCAGCGAGCTTGGCGTCCTCTTTCTTTTGGGTGATAGGATCCGCAGA
                      ____________________________________________________________
consensus             GGCAGCCTCTTGGGCAGCGAGCTTGGCGTCCTCTTTCTTTTGGGTGATAGGATCCGCAGA
 
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rJMSF001C02-          CACAATCTCTCTTCTTATGGCTCTCAGCCTCTTCTCCCTCTTTGATCTCATAGACTTCGC
JMSF001C02+           CACAATCTCTCTTCTTATGGCTCTCAGCCTCTTCTCCCTCTTTGATCTCATAGACTTCGC
JMSF033L20+           CACAATCTCTCTTCTTATGGCTCTCAGCCTCTTCTCCCTCTTTGATCTCATAGACTTCGC
JMFF001O14+           CACAATCTCTCTTCTTATGGCTCTCAGCCTCTTCTCCCTCTTTGATCTCATAGACTTCGC
                      ____________________________________________________________
consensus             CACAATCTCTCTTCTTATGGCTCTCAGCCTCTTCTCCCTCTTTGATCTCATAGACTTCGC
 
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rJMSF001C02-          CATTGTGCTTCCACTCTGTGTTGGTCTGCGATTTTTCTAGGGTTTAAGAGGAGAAACAGA
JMSF001C02+           CATTGTGCTTCCACTCTGTGTTGGTCTGCGATTTTTCTAGGGTTTAAGAGGAGAAACAGA
JMSF033L20+           CATTGTGCTTCCACTCTGTGTTGGTCTGCGATTTTTCTAGGGTTTAAGAGGAGAAACAGA
JMFF001O14+           CATTGTGCTTCCACTCTGTGTTGGTCTGCGATTTTTCTAGGGTTTAAGAGGAGAAACAGA
                      ____________________________________________________________
consensus             CATTGTGCTTCCACTCTGTGTTGGTCTGCGATTTTTCTAGGGTTTAAGAGGAGAAACAGA
 
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rJMSF001C02-          GGTTGAAGATGAGGCTTCGAAATATGTTTGC                             
JMSF001C02+           GGTTGAAGATGAGGCTTCGAAATATGTTTGC                             
JMSF033L20+           GGTTGAAGATGAGGCTTCGAAATATGTTTGC                             
JMFF001O14+           GGTTGAAGATGAGGCTTCGAAATATGTTTGCGGGTCAGAAGGTGCAATTCGTGGAAACCC
                      ____________________________________________________________
consensus             GGTTGAAGATGAGGCTTCGAAATATGTTTGCGGGTCAGAAGGTGCAATTCGTGGAAACCC