Contig 008704:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001H24Sequence513008704 (2)ref|XP_004233065.1|4e-91PREDICTED: ras-related protein RABA1d [Solanum lycopersicum] ref|XP_006358110.1|664008704 (2)gb|KHG06502.1|7e-99Ras-related RABA1c -like protein [Gossypium arboreum]

Alignment

This contig is upended


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rJMFF001H24-                          ATGAATCAGATGTTAATGGAATCCACTGAATAAATTACATTCCT
                      ____________________________________________________________
consensus                             ATGAATCAGATGTTAATGGAATCCACTGAATAAATTACATTCCT
 
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rJMFF001H24-          TCTATGAAGTGAATGAAGAAAATACTAGAAAGACTGTAACTAAAAGCCTAGGATGTTCAA
                      ____________________________________________________________
consensus             TCTATGAAGTGAATGAAGAAAATACTAGAAAGACTGTAACTAAAAGCCTAGGATGTTCAA
 
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rJMFF001H24-          AACAACATGGGTGTACATATATAGAAACATGCAGCAATACACATTCCACCATTAATGCAG
                      ____________________________________________________________
consensus             AACAACATGGGTGTACATATATAGAAACATGCAGCAATACACATTCCACCATTAATGCAG
 
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rJMFF001H24-          CTTAACTTAACTTGCTTGGAAGTGTTCAAGAACAGCAACCGCTTTTCTTGACTGCAGATA
                      ____________________________________________________________
consensus             CTTAACTTAACTTGCTTGGAAGTGTTCAAGAACAGCAACCGCTTTTCTTGACTGCAGATA
 
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rJMFF001H24-          CATCTTTACCAATATCAATTTTCTCGCCCTTCGAAGGGACAGCAGAAGCCGTTCCATTCT
                      ____________________________________________________________
consensus             CATCTTTACCAATATCAATTTTCTCGCCCTTCGAAGGGACAGCAGAAGCCGTTCCATTCT
 
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rJMFF001H24-          CGCCGCTCTCCATGGCTTTCTTGCTCACGACGTGGTAGATTTGGGCAAGAACTTCAGAGA
                      ____________________________________________________________
consensus             CGCCGCTCTCCATGGCTTTCTTGCTCACGACGTGGTAGATTTGGGCAAGAACTTCAGAGA
 
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rJMFF001H24-          AAGCGTTCTCCACGTTAGTGGCTTCGAGTGCTGAAGTTTCCATGAAGTAGAGGGATTCCC
                      ____________________________________________________________
consensus             AAGCGTTCTCCACGTTAGTGGCTTCGAGTGCTGAAGTTTCCATGAAGTAGAGGGATTCCC
 
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rJMFF001H24-          TCTCCGCGAGAGACCTCCCGTCCTCCGTTGACACTGCCACGAGGTGCCGGAGATCAGATT
                      ____________________________________________________________
consensus             TCTCCGCGAGAGACCTCCCGTCCTCCGTTGACACTGCCACGAGGTGCCGGAGATCAGATT
 
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rJMFF001H24-          TGTTGCCAACGAGCATGACAACGATGTTGGGATCCGTGTGGTCTCTCAACTCCTTGAGCC
                      ____________________________________________________________
consensus             TGTTGCCAACGAGCATGACAACGATGTTGGGATCCGTGTGGTCTCTCAACTCCTTGAGCC
 
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rJMFF001H24-          ACCTCTCAATGCTTTCGAAAGTCGAGTGGCGGGTGACATCATACACGAGCAAAGCACCCA
JMFF001H24+                                              ACATCATACACGAGCAAAGCACCCA
                      ____________________________________________________________
consensus             ACCTCTCAATGCTTTCGAAAGTCGAGTGGCGGGTGACATCATACACGAGCAAAGCACCCA
 
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rJMFF001H24-          CCGCACCTCTGTAGTATGCACTAGTGATTGCCCGGTACCTTTCNTGGCCAGCGGTGTCCC
JMFF001H24+           CCGCACCTCTGTAGTATGCACTAGTGATTGCCCGGTACCTTTCTTGGCCAGCGGTGTCCC
                      ____________________________________________________________
consensus             CCGCACCTCTGTAGTATGCACTAGTGATTGCCCGGTACCTTTCTTGGCCAGCGGTGTCCC
 
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rJMFF001H24-          AAATTTGAGCCTTGATGACT                                        
JMFF001H24+           AAATTTGAGCCTTGATGACTTTGGCATCCACAGTCAAGCTTCTGGTAGCGAACTCAACGC
                      ____________________________________________________________
consensus             AAATTTGAGCCTTGATGACTTTGGCATCCACAGTCAAGCTTCTGGTAGCGAACTCAACGC
 
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JMFF001H24+           CAATGGTGGACTTGGACTCGAGGCTGAACTCGTTCCTGGTGAATCTTGAGAGCAAGTTGG
                      ____________________________________________________________
consensus             CAATGGTGGACTTGGACTCGAGGCTGAACTCGTTCCTGGTGAATCTTGAGAGCAAGTTGG
 
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JMFF001H24+           ATTTGCCCACACCCGAATCCCCAATCAAAACCAACTTGAATAGATAATCGTAGTCGTCTT
                      ____________________________________________________________
consensus             ATTTGCCCACACCCGAATCCCCAATCAAAACCAACTTGAATAGATAATCGTAGTCGTCTT
 
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JMFF001H24+           CAGCTCTATACCCAGCCATCATCCACTTAGCTTCTACAACACCACAGCCCCAACTCTTTT
                      ____________________________________________________________
consensus             CAGCTCTATACCCAGCCATCATCCACTTAGCTTCTACAACACCACAGCCCCAACTCTTTT
 
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JMFF001H24+           TCTTTTCTTTTCTTTTCCCTTTTGTTAGTGTTGTGAGTTAGTTTTCAAAGTTGTGTTTTT
                      ____________________________________________________________
consensus             TCTTTTCTTTTCTTTTCCCTTTTGTTAGTGTTGTGAGTTAGTTTTCAAAGTTGTGTTTTT