| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001C12 | Sequence | 519 | 008702 (4) | ref|XP_011091529.1| | 139 | PREDICTED: uncharacterized protein LOC105171946 [Sesamum indicum] ref|XP_0110915 | 711 | 012273 (4) | ref|XP_006339473.1| | 3e-72 | PREDICTED: U-box domain-containing protein 12-like isoform X2 [Solanum tuberosu |
| JMFF016A11 | Sequence | 601 | 008702 (4) | ref|XP_011091529.1| | 187 | PREDICTED: uncharacterized protein LOC105171946 [Sesamum indicum] ref|XP_0110915 | 710 | 012273 (4) | ref|XP_006339473.1| | 3e-72 | PREDICTED: U-box domain-containing protein 12-like isoform X2 [Solanum tuberosu |
| JMFF044K13 | Sequence | 646 | 008702 (4) | ref|XP_011091529.1| | 283 | PREDICTED: uncharacterized protein LOC105171946 [Sesamum indicum] ref|XP_0110915 | 557 | 012273 (4) | ref|XP_006339473.1| | 2e-60 | PREDICTED: U-box domain-containing protein 12-like isoform X2 [Solanum tuberosu |
| JMSF011L13 | Sequence | 442 | 008702 (4) | ref|XP_011091529.1| | 142 | PREDICTED: uncharacterized protein LOC105171946 [Sesamum indicum] ref|XP_0110915 | 203 | 023464 | |||
This contig is upended
. : . : . : . : . : . :
JMFF044K13+ GAACAGCAAGAACACTCTTCTC
____________________________________________________________
consensus GAACAGCAAGAACACTCTTCTC
. : . : . : . : . : . :
JMFF044K13+ GTCGTCTTTCATGGCGTCCAAAAGGCAATCGATCGCTCTGTGTTTCGCCTCCAAGTGCCC
____________________________________________________________
consensus GTCGTCTTTCATGGCGTCCAAAAGGCAATCGATCGCTCTGTGTTTCGCCTCCAAGTGCCC
. : . : . : . : . : . :
JMFF044K13+ GATTTGAAGCCGGGCAAGCAATTCTCTCAAATTCAAATCCCCTGAATCAGCCTCTGCTGG
____________________________________________________________
consensus GATTTGAAGCCGGGCAAGCAATTCTCTCAAATTCAAATCCCCTGAATCAGCCTCTGCTGG
. : . : . : . : . : . :
JMFF044K13+ GAAAGTGACTTCCCCAAGAACTCCTGTTTTGATCAACAGCCCACAATCGCGCAAATTCAA
JMFF016A11+ A
____________________________________________________________
consensus GAAAGTGACTTCCCCAAGAACTCCTGTTTTGATCAACAGCCCACAATCGCGCAAATTCAA
. : . : . : . : . : . :
JMFF044K13+ ATCCAGTTTCCCAGATAAAGCATCCAAATCGCTTTGCATTCGAAGCTTTCCCTCATACTT
JMFF016A11+ ATCCAGTTTCCCAGATAAAGCATCCAAATCGCTTTGCATTCGAAGCTTTCCCTCATACTT
____________________________________________________________
consensus ATCCAGTTTCCCAGATAAAGCATCCAAATCGCTTTGCATTCGAAGCTTTCCCTCATACTT
. : . : . : . : . : . :
JMFF044K13+ TTCTCCCACACATATCTCAGCCATCTCCATAGCTTCATTCAGTGTCTGCAACACTGCCTG
JMSF011L13+ CATCTCCATAGCTTCATTCAGTGTCTGCAACACTGCCTG
JMFF016A11+ TTCTCCCACACATATCTCAGCCATCTCCATAGCTTCATTCAGTGTCTGCAACACTGCCTG
JMFF001C12+ CATCTCCATAGCTTCATTCAGTGTCTGCAACACTGCCTG
____________________________________________________________
consensus TTCTCCCACACATATCTCAGCCATCTCCATAGCTTCATTCAGTGTCTGCAACACTGCCTG
. : . : . : . : . : . :
JMFF044K13+ CAGCTGTTCTTTGCAGAGAGCATTCTTGGAGAAGCATGGATGGCTTGACAAATCTGATAA
JMSF011L13+ CAGCTGTTCTTTGCAGAGAGCATTCTTGGAGAAGCATGGATGGCTTGACAAATCTGATAA
JMFF016A11+ CAGCTGTTCTTTGCAGAGAGCATTCTTGGAGAAGCATGGATGGCTTGACAAATCTGATAA
JMFF001C12+ CAGCTGTTCTTTGCAGAGAGCATTCTTGGAGAAGCATGGATGGCTTGACAAATCTGATAA
____________________________________________________________
consensus CAGCTGTTCTTTGCAGAGAGCATTCTTGGAGAAGCATGGATGGCTTGACAAATCTGATAA
. : . : . : . : . : . :
JMFF044K13+ CTTTGAAGGGATTTGCTCCAATTTCGAAACAATCATCTTCCACCTCCCTGGAAATCCTTT
JMSF011L13+ CTTTGAAGGGATTTGCTCCAATTTCGAAACAATCATCTTCCACCTCCCTGGAAATCCTTT
JMFF016A11+ CTTTGAAGGGATTTGCTCCAATTTCGAAACAATCATCTTCCACCTCCCTGGAAATCCTTT
JMFF001C12+ CTTTGAAGGGATTTGCTCCAATTTCGAAACAATCATCTTCCACCTCCCTGGAAATCCTTT
____________________________________________________________
consensus CTTTGAAGGGATTTGCTCCAATTTCGAAACAATCATCTTCCACCTCCCTGGAAATCCTTT
. : . : . : . : . : . :
JMFF044K13+ CACCTCTCTAGCCCTCTTTAGAGCCTCAGGAACAAGCTGCTGTGCTTTCACTAGCCACTC
JMSF011L13+ CACCTCTCTAGCCCTCTTTAGAGCCTCAGGAACAAGCTGCTGTGCTTTCACTAGCCACTC
JMFF016A11+ CACCTCTCTAGCCCTCTTTAGAGCCTCAGGAACAAGCTGCTGTGCTTTCACTAGCCACTC
JMFF001C12+ CACCTCTCTAGCCCTCTTTAGAGCCTCAGGAACAAGCTGCTGTGCTTTCACTAGCCACTC
____________________________________________________________
consensus CACCTCTCTAGCCCTCTTTAGAGCCTCAGGAACAAGCTGCTGTGCTTTCACTAGCCACTC
. : . : . : . : . : . :
JMFF044K13+ TTCTGCAGACAAGTTTTCGCCCCCGTTTTTCCCACAATCTTCACCCATTTTCTCAGACTT
JMSF011L13+ TTCTGCAGACAAGTTTTCGCCCCCGTTTTTCCCACAATCTTCACCCATTTTCTCAGACTT
JMFF016A11+ TTCTGCAGACAAGTTTTCGCCCCCGTTTTTCCCACAATCTTCACCCATTTTCTCAGACTT
JMFF001C12+ TTCTGCAGACAAGTTTTCGCCCCCGTTTTTCCCACAATCTTCACCCATTTTCTCAGACTT
____________________________________________________________
consensus TTCTGCAGACAAGTTTTCGCCCCCGTTTTTCCCACAATCTTCACCCATTTTCTCAGACTT
. : . : . : . : . : . :
JMFF044K13+ TTGCTGGAATCACAGGAAAAATCT
JMSF011L13+ TTGCTGGAATCACAGGAAAAATCTCTCGTGGCAGTATTAAGAAATAAAGTTACGCATTCG
JMFF016A11+ TTGCTGGAATCACAGGAAAAATCTCTCGTGGCAGTATTAAGAAATAAAGTTACGCATTCG
JMFF001C12+ TTGCTGGAATCACAGGAAAAATCTCTCGTGGCAGTATTAAGAAATAAAGTTACGCATTCG
____________________________________________________________
consensus TTGCTGGAATCACAGGAAAAATCTCTCGTGGCAGTATTAAGAAATAAAGTTACGCATTCG
. : . : . : . : . : . :
JMSF011L13+ CTACCAGTTATAGCTTAATAATTCGAATCAGCCATATCAAGAAATGAAGTTCTTGACAGA
JMFF016A11+ CTACCAGTTATAGCTTAATAATTCGAATCAGCCATATCAAGAAATGAAGTTCTTGACAGA
JMFF001C12+ CTACCAGTTATAGCTTAATAATTCGAATCAGCCATATCAAGAAATGAAGTTCTTGACAGA
____________________________________________________________
consensus CTACCAGTTATAGCTTAATAATTCGAATCAGCCATATCAAGAAATGAAGTTCTTGACAGA
. : . : . : . : . : . :
JMSF011L13+ ATGGAAGGAACAGCTTTCATGGAGCCAAACAAAAAG
JMFF016A11+ ATGGAAGGAACAGCTTTCATGGAGCCAAACAAAAAGGGGTGGTTGAGATAGGGAAAGCAT
JMFF001C12+ ATGGAAGGAACAGCTTTCATGGAGCCAAACAAAAAGGGGTGGTTGAGATAGGGAAAGCAT
____________________________________________________________
consensus ATGGAAGGAACAGCTTTCATGGAGCCAAACAAAAAGGGGTGGTTGAGATAGGGAAAGCAT
. : . : . : . : . : . :
JMFF016A11+ TTAAGAAATCATCTATGTGATCTGTCATATAAAGATGAAAGCTTTTGGTGGTGTATCAAT
JMFF001C12+ TTAAGAAATCATCTATGTGATCTGTCATATAAAGATGAAAGCTTTTGGTGGTGTATCAAT
____________________________________________________________
consensus TTAAGAAATCATCTATGTGATCTGTCATATAAAGATGAAAGCTTTTGGTGGTGTATCAAT