Contig 008698:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+                                                                CATTAT
rJMCP015B07+                                                          TAGGTagtaaAT
                      ____________________________________________________________
consensus                                                             TAGGTTCATTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          TTTTTTCTCATaAAGATGCCCAgccgaGCTGTCAAtgttgagTGCGAGTGATATCTTGTT
rJMCP015B07+          TTTTTTCTCAaaAAGATGCCCACGcCTGCTGTCAAACAACTCTGCGAGTGATATCTTGTT
                      ____________________________________________________________
consensus             TTTTTTCTCATTAAGATGCCCACGGCTGCTGTCAAACAACTCTGCGAGTGATATCTTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          CTTTATAGCTTGGTAAAATGggTGCTGTCGAGAACTCAACTTACAATGCACTGTTATCTC
rJMCP015B07+          CTTTATAGCTTGGTAAAATGggTGCTGTCGAGAACTCAACTTACAATGCACTGTTATCTC
                      ____________________________________________________________
consensus             CTTTATAGCTTGGTAAAATGCCTGCTGTCGAGAACTCAACTTACAATGCACTGTTATCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          AGTTTTCCCAGTCAACTCAGAGACTACATCTTTTTTAACCCGCCGCAGCATGAATGGCTT
rJMCP015B07+          AGTTTTCCCAGTCAACTCAGAGACTACATCTTTTTTAACCCGCCGCAGCATGAATGGCTT
                      ____________________________________________________________
consensus             AGTTTTCCCAGTCAACTCAGAGACTACATCTTTTTTAACCCGCCGCAGCATGAATGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          CAGAATTGCATGCAATCTATTAAGCTGGTGCTCGTTCAAGGTCCCACCATGCTCAGCATG
rJMCP015B07+          CAGAATTGCATGCAATCTATTAAGCTGGTGCTCGTTCAAGGTCCCACCATGCTCAGCATG
                      ____________________________________________________________
consensus             CAGAATTGCATGCAATCTATTAAGCTGGTGCTCGTTCAAGGTCCCACCATGCTCAGCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          GTTCTCAATTCCTTTTGAGAACCACTCATTAAATTGCTCATGGCTATCAAATAAGGTGGG
rJMCP015B07+          GTTCTCAATTCCTTTTGAGAACCACTCATTAAATTGCTCATGGCTATCAAATAAGGTGGG
                      ____________________________________________________________
consensus             GTTCTCAATTCCTTTTGAGAACCACTCATTAAATTGCTCATGGCTATCAAATAAGGTGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          CATAATGAAATGTAGGAGAGCCCACAGCTCAGCCATGTTATTTTGGATTGGAGTACCAGT
rJMCP015B07+          CATAATGAAATGTAGGAGAGCCCACAGCTCAGCCATGTTATTTTGGATTGGAGTACCAGT
                      ____________________________________________________________
consensus             CATAATGAAATGTAGGAGAGCCCACAGCTCAGCCATGTTATTTTGGATTGGAGTACCAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          CAAAAGCAAGCGATTTCGACAATTGAAACTCAGTAATGTCTTCCATCTTATACTGTTTGC
rJMCP015B07+          CAAAAGCAAGCGATTTCGACAATTGAAACTCAGTAATGTCTTCCATCTTATACTGTTTGC
                      ____________________________________________________________
consensus             CAAAAGCAAGCGATTTCGACAATTGAAACTCAGTAATGTCTTCCATCTTATACTGTTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          GCTTTTAATTGCCTGGGCTTCGTCCAACACCATATATTGCCATTTAACACGTCGGAAGTA
rJMCP015B07+          GCTTTTAATTGCCTGGGCTTCGTCCAACACCATATATTGCCATTTAACACGTCGGAAGTA
                      ____________________________________________________________
consensus             GCTTTTAATTGCCTGGGCTTCGTCCAACACCATATATTGCCATTTAACACGTCGGAAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015B05+          CTTCTCATCAGACACTAGAAGTTGGTAACTGGTGATGAGAATGTGGAATCCGGCATCCC 
rJMCP015B07+          CTTCTCATCAGACACTAGAAGTaccattgaGGTGATGAGAATGTGGAATCCGGCATCCCC
                      ____________________________________________________________
consensus             CTTCTCATCAGACACTAGAAGTTGGTAACTGGTGATGAGAATGTGGAATCCGGCATCCCC