Contig 008691:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP004G05Sequence620008691 (2)ref|XP_009795683.1|5e-108PREDICTED: ammonium transporter 1 member 2 [Nicotiana sylvestris]
JMSF006I07Sequence329000602 (4)ref|XP_009602795.1|1e-39PREDICTED: ammonium transporter 1 member 2 [Nicotiana tomentosiformis]388008691 (2)ref|XP_006340472.1|88.2PREDICTED: ammonium transporter 1 member 2-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF006I07- AAACA
                      ____________________________________________________________
consensus AAACA
 
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rJMSF006I07- TCCTCGATTGGCTCGTACTTATTATGTACATGTTACAACTTACAAGCAAGAAGTGAAGGA
                      ____________________________________________________________
consensus TCCTCGATTGGCTCGTACTTATTATGTACATGTTACAACTTACAAGCAAGAAGTGAAGGA
 
. : . : . : . : . : . :
rJMSF006I07- TACATGCACCTCATGATTAAACCAGACAAACCACAAAAACCAAACCAGACAAACCTGCTA
                      ____________________________________________________________
consensus TACATGCACCTCATGATTAAACCAGACAAACCACAAAAACCAAACCAGACAAACCTGCTA
 
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rJMSF006I07- CATTAAAGTATATATTACACTAAAAACCACGCACACTTAGCTTTGTAATATGATAGAAAG
                      ____________________________________________________________
consensus CATTAAAGTATATATTACACTAAAAACCACGCACACTTAGCTTTGTAATATGATAGAAAG
 
. : . : . : . : . : . :
rJMSF006I07- TAATTTGGTTGGTGTGGTCCATGCATGGTGCCAGTCGTCATACCGCCGACGGGTGGGAGT
                      ____________________________________________________________
consensus TAATTTGGTTGGTGTGGTCCATGCATGGTGCCAGTCGTCATACCGCCGACGGGTGGGAGT
 
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rJMSF006I07- TGTGATCCGGTGTGGGAGTGTTGGACGGTTCGATTCTCCTCATTTTGATTCCCGGATAGT
JMCP004G05+ CATTTTGATTCCCGGATAGT
                      ____________________________________________________________
consensus TGTGATCCGGTGTGGGAGTGTTGGACGGTTCGATTCTCCTCATTTTGATTCCCGGATAGT
 
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rJMSF006I07- GTGATGACTGGTCGTCTTCGTCGTGGTACGCATATGCAAACCCGCCGTGCCTCGTCAGAT
JMCP004G05+ GTGATGACTcGagcaCTTCGTCGTGGTACGCATATGCAAACCCGCCGTGCCTCGTCAGAT
                      ____________________________________________________________
consensus GTGATGACTGGTCGTCTTCGTCGTGGTACGCATATGCAAACCCGCCGTGCCTCGTCAGAT
 
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rJMSF006I07- CCATTCCATGGGTCTCATCTTCC
JMCP004G05+ CCATTCCATGGGTCTCATCTTCCGACGAGATTCTCAACAGTTTCAGCTTGTGTAGCATGT
                      ____________________________________________________________
consensus CCATTCCATGGGTCTCATCTTCCGACGAGATTCTCAACAGTTTCAGCTTGTGTAGCATGT
 
. : . : . : . : . : . :
JMCP004G05+ AGAACAGCGGCCCCATCGTGGCGGAAACCCACCCGAAAATCACCACAATCTGGATCATCT
                      ____________________________________________________________
consensus AGAACAGCGGCCCCATCGTGGCGGAAACCCACCCGAAAATCACCACAATCTGGATCATCT
 
. : . : . : . : . : . :
JMCP004G05+ GTGCCGCCAGTAGCTTTCCGCCGCCGCCCATGAACAGCCCGTAAGGCCGGTCCGGGAGCC
                      ____________________________________________________________
consensus GTGCCGCCAGTAGCTTTCCGCCGCCGCCCATGAACAGCCCGTAAGGCCGGTCCGGGAGCC
 
. : . : . : . : . : . :
JMCP004G05+ CTGGGTAGACTTCGTTGACGTAGCTCTTTTTCGCGAATAAACCGGTGAAGATTAGCCCCC
                      ____________________________________________________________
consensus CTGGGTAGACTTCGTTGACGTAGCTCTTTTTCGCGAATAAACCGGTGAAGATTAGCCCCC
 
. : . : . : . : . : . :
JMCP004G05+ ATGCACCGCAGCCGCCGTGGAGCTGAGCCGCCTCTAGCGGGTCGTCGTACTTGCAGACGG
                      ____________________________________________________________
consensus ATGCACCGCAGCCGCCGTGGAGCTGAGCCGCCTCTAGCGGGTCGTCGTACTTGCAGACGG
 
. : . : . : . : . : . :
JMCP004G05+ CGGCGAGCTTGTTGGCCCCTATCAGAACCCACGCCGCCACGAATCCGCACACGATCGCCG
                      ____________________________________________________________
consensus CGGCGAGCTTGTTGGCCCCTATCAGAACCCACGCCGCCACGAATCCGCACACGATCGCCG
 
. : . : . : . : . : . :
JMCP004G05+ CCCACGGCTCCACCACCGAACACCCCGAAGTTATCGCCGCGAATCCGCCGAGGAGTCCGT
                      ____________________________________________________________
consensus CCCACGGCTCCACCACCGAACACCCCGAAGTTATCGCCGCGAATCCGCCGAGGAGTCCGT
 
. : . : . : . : . : . :
JMCP004G05+ TGCACACGTCTATCACGTTCCAGTGCCCGACCAACAACCGCTTCCCAAACAGCGTCGTGA
                      ____________________________________________________________
consensus TGCACACGTCTATCACGTTCCAGTGCCCGACCAACAACCGCTTCCCAAACAGCGTCGTGA
 
. : . : . : . : . : . :
JMCP004G05+ GCGCCGCCGTGCACCCCGCCAACGTCGTCGTCACGGCCGTCCTCCCCACGGCGCTCCACT
                      ____________________________________________________________
consensus GCGCCGCCGTGCACCCCGCCAACGTCGTCGTCACGGCCGTCCTCCCCACGGCGCTCCACT