Contig 008691:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP004G05Sequence620008691 (2)ref|XP_009795683.1|5e-108PREDICTED: ammonium transporter 1 member 2 [Nicotiana sylvestris]
JMSF006I07Sequence329000602 (4)ref|XP_009602795.1|1e-39PREDICTED: ammonium transporter 1 member 2 [Nicotiana tomentosiformis]388008691 (2)ref|XP_006340472.1|88.2PREDICTED: ammonium transporter 1 member 2-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006I07-                                                                 AAACA
                      ____________________________________________________________
consensus                                                                    AAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006I07-          TCCTCGATTGGCTCGTACTTATTATGTACATGTTACAACTTACAAGCAAGAAGTGAAGGA
                      ____________________________________________________________
consensus             TCCTCGATTGGCTCGTACTTATTATGTACATGTTACAACTTACAAGCAAGAAGTGAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006I07-          TACATGCACCTCATGATTAAACCAGACAAACCACAAAAACCAAACCAGACAAACCTGCTA
                      ____________________________________________________________
consensus             TACATGCACCTCATGATTAAACCAGACAAACCACAAAAACCAAACCAGACAAACCTGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006I07-          CATTAAAGTATATATTACACTAAAAACCACGCACACTTAGCTTTGTAATATGATAGAAAG
                      ____________________________________________________________
consensus             CATTAAAGTATATATTACACTAAAAACCACGCACACTTAGCTTTGTAATATGATAGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006I07-          TAATTTGGTTGGTGTGGTCCATGCATGGTGCCAGTCGTCATACCGCCGACGGGTGGGAGT
                      ____________________________________________________________
consensus             TAATTTGGTTGGTGTGGTCCATGCATGGTGCCAGTCGTCATACCGCCGACGGGTGGGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006I07-          TGTGATCCGGTGTGGGAGTGTTGGACGGTTCGATTCTCCTCATTTTGATTCCCGGATAGT
JMCP004G05+                                                   CATTTTGATTCCCGGATAGT
                      ____________________________________________________________
consensus             TGTGATCCGGTGTGGGAGTGTTGGACGGTTCGATTCTCCTCATTTTGATTCCCGGATAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006I07-          GTGATGACTGGTCGTCTTCGTCGTGGTACGCATATGCAAACCCGCCGTGCCTCGTCAGAT
JMCP004G05+           GTGATGACTcGagcaCTTCGTCGTGGTACGCATATGCAAACCCGCCGTGCCTCGTCAGAT
                      ____________________________________________________________
consensus             GTGATGACTGGTCGTCTTCGTCGTGGTACGCATATGCAAACCCGCCGTGCCTCGTCAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006I07-          CCATTCCATGGGTCTCATCTTCC                                     
JMCP004G05+           CCATTCCATGGGTCTCATCTTCCGACGAGATTCTCAACAGTTTCAGCTTGTGTAGCATGT
                      ____________________________________________________________
consensus             CCATTCCATGGGTCTCATCTTCCGACGAGATTCTCAACAGTTTCAGCTTGTGTAGCATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP004G05+           AGAACAGCGGCCCCATCGTGGCGGAAACCCACCCGAAAATCACCACAATCTGGATCATCT
                      ____________________________________________________________
consensus             AGAACAGCGGCCCCATCGTGGCGGAAACCCACCCGAAAATCACCACAATCTGGATCATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP004G05+           GTGCCGCCAGTAGCTTTCCGCCGCCGCCCATGAACAGCCCGTAAGGCCGGTCCGGGAGCC
                      ____________________________________________________________
consensus             GTGCCGCCAGTAGCTTTCCGCCGCCGCCCATGAACAGCCCGTAAGGCCGGTCCGGGAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP004G05+           CTGGGTAGACTTCGTTGACGTAGCTCTTTTTCGCGAATAAACCGGTGAAGATTAGCCCCC
                      ____________________________________________________________
consensus             CTGGGTAGACTTCGTTGACGTAGCTCTTTTTCGCGAATAAACCGGTGAAGATTAGCCCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP004G05+           ATGCACCGCAGCCGCCGTGGAGCTGAGCCGCCTCTAGCGGGTCGTCGTACTTGCAGACGG
                      ____________________________________________________________
consensus             ATGCACCGCAGCCGCCGTGGAGCTGAGCCGCCTCTAGCGGGTCGTCGTACTTGCAGACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP004G05+           CGGCGAGCTTGTTGGCCCCTATCAGAACCCACGCCGCCACGAATCCGCACACGATCGCCG
                      ____________________________________________________________
consensus             CGGCGAGCTTGTTGGCCCCTATCAGAACCCACGCCGCCACGAATCCGCACACGATCGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP004G05+           CCCACGGCTCCACCACCGAACACCCCGAAGTTATCGCCGCGAATCCGCCGAGGAGTCCGT
                      ____________________________________________________________
consensus             CCCACGGCTCCACCACCGAACACCCCGAAGTTATCGCCGCGAATCCGCCGAGGAGTCCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP004G05+           TGCACACGTCTATCACGTTCCAGTGCCCGACCAACAACCGCTTCCCAAACAGCGTCGTGA
                      ____________________________________________________________
consensus             TGCACACGTCTATCACGTTCCAGTGCCCGACCAACAACCGCTTCCCAAACAGCGTCGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP004G05+           GCGCCGCCGTGCACCCCGCCAACGTCGTCGTCACGGCCGTCCTCCCCACGGCGCTCCACT
                      ____________________________________________________________
consensus             GCGCCGCCGTGCACCCCGCCAACGTCGTCGTCACGGCCGTCCTCCCCACGGCGCTCCACT