Contig 008684:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030O03Sequence654009409 (2)emb|CBI16679.3|2e-35unnamed protein product [Vitis vinifera]679008684 (2)ref|XP_009373205.1|7e-70PREDICTED: ELMO domain-containing protein A isoform X1 [Pyrus x bretschneideri]
JMSF052D04Sequence647009409 (2)922008684 (2)gb|KDP28872.1|1e-126hypothetical protein JCGZ_14643 [Jatropha curcas]

Alignment

This contig is upended


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rJMSF052D04+                                                GCTCAGGAAGAGTGCTTGCAGA
                      ____________________________________________________________
consensus                                                   GCTCAGGAAGAGTGCTTGCAGA
 
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rJMSF052D04+          GGTTACAGAGTCGTATGGATATTTCTTATGACAGGTCAATTCCAGAACATCAGTCAGCTT
                      ____________________________________________________________
consensus             GGTTACAGAGTCGTATGGATATTTCTTATGACAGGTCAATTCCAGAACATCAGTCAGCTT
 
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rJMSF052D04+          TAAGGGCTTTGTGGAATGCTGCCTTTCCTGAAGAGGAACTACGTGACCTAATATCTGAGC
                      ____________________________________________________________
consensus             TAAGGGCTTTGTGGAATGCTGCCTTTCCTGAAGAGGAACTACGTGACCTAATATCTGAGC
 
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rJMSF052D04+          AGTGGAAGGAAATGGGTTGGCAAGGCAAAGATCCAGCTACTGACTTTAGGGGTGGTGGAT
                      ____________________________________________________________
consensus             AGTGGAAGGAAATGGGTTGGCAAGGCAAAGATCCAGCTACTGACTTTAGGGGTGGTGGAT
 
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rJMSF030O03+                                                         TCCTTCCAGGATC
rJMSF052D04+          TTATATCCCTGGAAAACTTATTATATTTTGCTAACAACTTTCCGAATTCCTTCCAGGATC
                      ____________________________________________________________
consensus             TTATATCCCTGGAAAACTTATTATATTTTGCTAACAACTTTCCGAATTCCTTCCAGGATC
 
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rJMSF030O03+          TTCTTCAAAAGAGGGAAGGCGACCGGTCCATGTGGGAATACCCATTTGCTGTTGCTGGTG
rJMSF052D04+          TTCTTCAAAAGAGGGAAGGCGACCGGTCCATGTGGGAATACCCATTTGCTGTTGCTGGTG
                      ____________________________________________________________
consensus             TTCTTCAAAAGAGGGAAGGCGACCGGTCCATGTGGGAATACCCATTTGCTGTTGCTGGTG
 
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rJMSF030O03+          TCAACATCACATTCATGCTTATCCAGATGTTAGATCTAGAAGCAGTAAAACCTCGAAACC
rJMSF052D04+          TCAACATCACATTCATGCTTATCCAGATGTTAGATCTAGAAGCAGTAAAACCTCGAAACC
                      ____________________________________________________________
consensus             TCAACATCACATTCATGCTTATCCAGATGTTAGATCTAGAAGCAGTAAAACCTCGAAACC
 
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rJMSF030O03+          TGGTTGGAGCAACCTTCTTGAAGTTTCTTGCAGAGAATGAATCAGCATTTGATCTTCTAT
rJMSF052D04+          TGGTTGGAGCAACCTTCTTGAAGTTTCTTGCAGAGAATGAATCAGCATTTGATCTTCTAT
                      ____________________________________________________________
consensus             TGGTTGGAGCAACCTTCTTGAAGTTTCTTGCAGAGAATGAATCAGCATTTGATCTTCTAT
 
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rJMSF030O03+          ATTGTATTACTTTCAAGTTGATGGATCACCAGTGGCTTTCCATGCGAGCATCATATATGG
rJMSF052D04+          ATTGTATTACTTTCAAGTTGATGGATCACCAGTGGCTTTCCATGCGAGCATCATATATGG
                      ____________________________________________________________
consensus             ATTGTATTACTTTCAAGTTGATGGATCACCAGTGGCTTTCCATGCGAGCATCATATATGG
 
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rJMSF030O03+          ATTTCAATTCAGTCATGAAGGCTACGCGGAGGCAGCTAGAAAAGGAACTTCTACTAGAAG
rJMSF052D04+          ATTTCAATTCAGTCATGAAGGCTACGCGGAGGCAGCTAGAAAAGGAACTTCTACTAGAAG
                      ____________________________________________________________
consensus             ATTTCAATTCAGTCATGAAGGCTACGCGGAGGCAGCTAGAAAAGGAACTTCTACTAGAAG
 
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rJMSF030O03+          ACATAACACGGCTGGAAGATTTGCCCTCTTACAGCCTACTCACTTGATAGTTTTATACTC
rJMSF052D04+          ACATAACACGGCTGGAAGATTTGCCCTCTTACAGCCTACTCACTTGATAGTTTTATACTC
                      ____________________________________________________________
consensus             ACATAACACGGCTGGAAGATTTGCCCTCTTACAGCCTACTCACTTGATAGTTTTATACTC
 
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rJMSF030O03+          TGCTGACATTCTAAAAGTGAAATCGGTTACACAACATGGCTGGAAGATCCGAAGATTTCC
rJMSF052D04+          TGCTGACATTCTAAAAGTGAAATCGGTTACACAACATGGCTGGAAGATCCGAAGATTTCC
                      ____________________________________________________________
consensus             TGCTGACATTCTAAAAGTGAAATCGGTTACACAACATGGCTGGAAGATCCGAAGATTTCC
 
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rJMSF030O03+          CCATGTACGGACAGTGAAATAGTTTTGTACTGCTGACAGTCTAGACGTGAGTGGTTTTCA
rJMSF052D04+          CCATGTACGGACAGTGAAATAGTTTTGTACTGCTGACAGTCTAGACGTGAGTGGTTTTCA
                      ____________________________________________________________
consensus             CCATGTACGGACAGTGAAATAGTTTTGTACTGCTGACAGTCTAGACGTGAGTGGTTTTCA
 
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rJMSF030O03+          TTCGCAAAACATACATTACACGCGGCATTCATTGGTTGCAGTTTCCAGCTTCCAGGTTTC
rJMSF052D04+          TTCGCAAAACATACATTACACGCGGCATTCATTGGTTGCAGTTTCCAGCTTCCAGGTTTC
                      ____________________________________________________________
consensus             TTCGCAAAACATACATTACACGCGGCATTCATTGGTTGCAGTTTCCAGCTTCCAGGTTTC
 
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rJMSF030O03+          TCTACTCACGAGTTATTTTGACTGGATAGTGCTTGTTGTCAATGACACGTTTCTTCATCA
rJMSF052D04+          TCTACTCACGAGTTATTTTGACTGGATAGTGCTTGTTGTCAATGACACGTTTCTTCATCA
                      ____________________________________________________________
consensus             TCTACTCACGAGTTATTTTGACTGGATAGTGCTTGTTGTCAATGACACGTTTCTTCATCA
 
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rJMSF030O03+          CATTCTTTATTACTCATTAGGTTCTTGTAATTGAGCTTGTGGCTGCTACACAAAAATG  
rJMSF052D04+          CATTCTTTATTACTCATTAGGTTCTTGTAATTGAGCTTGTGGCTGCTACACAAAAATGTC
                      ____________________________________________________________
consensus             CATTCTTTATTACTCATTAGGTTCTTGTAATTGAGCTTGTGGCTGCTACACAAAAATGTC