Contig 008681:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF051L12Sequence698008681 (2)ref|XP_011097412.1|6e-103PREDICTED: WD repeat-containing protein 82-B isoform X1 [Sesamum indicum]811008681 (2)ref|XP_002521457.1|8e-149COMPASS component SWD2, putative [Ricinus communis] gb|EEF40947.1| COMPASS compo

Alignment

This contig is upended


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JMSF051L12-                                                     GGGCTCCAACAAGCGCTG
                      ____________________________________________________________
consensus                                                       GGGCTCCAACAAGCGCTG
 
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JMSF051L12-           TGATTCTTCGACAGGATGAAGGCACTCTCCGAGCTTAACGACGACATTGTTCGTAGCATG
                      ____________________________________________________________
consensus             TGATTCTTCGACAGGATGAAGGCACTCTCCGAGCTTAACGACGACATTGTTCGTAGCATG
 
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JMSF051L12-           ACAGTAGGAGCCGTCTTCTCTGATTTTGGTGGAAAGATAAGTTCACTTGATTTTCATCGG
                      ____________________________________________________________
consensus             ACAGTAGGAGCCGTCTTCTCTGATTTTGGTGGAAAGATAAGTTCACTTGATTTTCATCGG
 
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JMSF051L12-           ACTGCTGATCTATTGATAACTGCAAGCGAGGATGATTCTGTTAGACTTATTGACATTGCA
                      ____________________________________________________________
consensus             ACTGCTGATCTATTGATAACTGCAAGCGAGGATGATTCTGTTAGACTTATTGACATTGCA
 
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JMSF051L12-           AATGCCAAACTGTTGAAGACCACATATCATAAGCAGCATGGAGCTGATCAATCTATTGAG
                      ____________________________________________________________
consensus             AATGCCAAACTGTTGAAGACCACATATCATAAGCAGCATGGAGCTGATCAATCTATTGAG
 
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JMSF051L12-           ATTGTACCTGACGTGCCCTGCTATAAATCTGCTGCCAGAATCATTGCGATACCTATCCAT
rJMSF051L12+                                       TGCTGCCAGAATCATTGCGATACCTATCCAT
                      ____________________________________________________________
consensus             ATTGTACCTGACGTGCCCTGCTATAAATCTGCTGCCAGAATCATTGCGATACCTATCCAT
 
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JMSF051L12-           GTATGATAATCGGTGCCTCCGTTACTTTAAGGGACATAAAGAGAGGGTTGTGTCACTGTG
rJMSF051L12+          GTATGATAATCGGTGCNTCCGGTACTTTAAGGGACATAAAGAGAGGGTTGTGTCACTGTG
                      ____________________________________________________________
consensus             GTATGATAATCGGTGCCTCCGTTACTTTAAGGGACATAAAGAGAGGGTTGTGTCACTGTG
 
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JMSF051L12-           CATGTCTCCCGTTAATGATAGCTTTATGTCTGGTTCTCTTGACCACTCTGTCAGAATATG
rJMSF051L12+          CATGTCTCCCGTTAATGATAGCTTTATGTCTGGTTCTCTTGACCACTCTGTCAGAATATG
                      ____________________________________________________________
consensus             CATGTCTCCCGTTAATGATAGCTTTATGTCTGGTTCTCTTGACCACTCTGTCAGAATATG
 
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JMSF051L12-           GGATCTCCGTGTAAATGCTTGCCAGGGGATTATGCATCTTCGAGGCAGGCCGACAGTTGC
rJMSF051L12+          GGATCTCCGTGTAAATGCTTGCCAGGGGATTATGCATCTTCGAGGCAGGCCGACAGTTGC
                      ____________________________________________________________
consensus             GGATCTCCGTGTAAATGCTTGCCAGGGGATTATGCATCTTCGAGGCAGGCCGACAGTTGC
 
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JMSF051L12-           TTATGACCAGCAAGGTCTTGTATTTGCAGTAGCAATGGAAGGTGGCGCCATCAAATTGTT
rJMSF051L12+          TTATGACCAGCAAGGTCTTGTATTTGCAGTAGCAATGGAAGGTGGCGCCATCAAATTGTT
                      ____________________________________________________________
consensus             TTATGACCAGCAAGGTCTTGTATTTGCAGTAGCAATGGAAGGTGGCGCCATCAAATTGTT
 
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JMSF051L12-           TGATTCTAGATCATATGATAAGGGACCCTTCGATACATTCCTTGTTGGCGGGGATACTGC
rJMSF051L12+          TGATTCTAGATCATATGATAAGGGACCCTTCGATACATTCCTTGTTGGCGGGGATACTGC
                      ____________________________________________________________
consensus             TGATTCTAGATCATATGATAAGGGACCCTTCGATACATTCCTTGTTGGCGGGGATACTGC
 
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JMSF051L12-           AGAGGTTTGTGATATAAAATTCAGCAATGATGGCAAATCAATGCTTTTGACGACTACNAG
rJMSF051L12+          AGAGGTTTGTGATATAAAATTCAGCAATGATGGCAAATCAATGCTTTTGACGACTACAAG
                      ____________________________________________________________
consensus             AGAGGTTTGTGATATAAAATTCAGCAATGATGGCAAATCAATGCTTTTGACGACTACAAG
 
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JMSF051L12-           CAATAACATTTATATCCTTG                                        
rJMSF051L12+          CAATAACATTTATATCCTTGATGCTTATTGTGGAGAGAAGCGAGGTGGATTTAGTGTAGA
                      ____________________________________________________________
consensus             CAATAACATTTATATCCTTGATGCTTATTGTGGAGAGAAGCGAGGTGGATTTAGTGTAGA
 
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rJMSF051L12+          TCCATCTCCAAACACAACAATAGAGGCAACCTTTACTCCAGATGGACAATACGTTTTGTC
                      ____________________________________________________________
consensus             TCCATCTCCAAACACAACAATAGAGGCAACCTTTACTCCAGATGGACAATACGTTTTGTC
 
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rJMSF051L12+          AGGCTCTGGGGATGGCAACTTGCATGCTTGGAACATCAAAAACCCAAATAAGGTGGCTTC
                      ____________________________________________________________
consensus             AGGCTCTGGGGATGGCAACTTGCATGCTTGGAACATCAAAAACCCAAATAAGGTGGCTTC
 
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rJMSF051L12+          CTGGGATAGCTATGTAGGCGTTGCATCTTGTATGAAATGGGCTCCAAGGAGGGTAATGTT
                      ____________________________________________________________
consensus             CTGGGATAGCTATGTAGGCGTTGCATCTTGTATGAAATGGGCTCCAAGGAGGGTAATGTT
 
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rJMSF051L12+          TGCAGCTGCATCTTCCATTCTTACCCTTTGGATACCTGATCACTCAAAGCGACCGACTGA
                      ____________________________________________________________
consensus             TGCAGCTGCATCTTCCATTCTTACCCTTTGGATACCTGATCACTCAAAGCGACCGACTGA
 
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rJMSF051L12+          TTCTGGCACAACTCATCCTGAAACCGCAGCACATCCTGAAGAAATCATTCAATGAAGTGC
                      ____________________________________________________________
consensus             TTCTGGCACAACTCATCCTGAAACCGCAGCACATCCTGAAGAAATCATTCAATGAAGTGC
 
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rJMSF051L12+          TGACCATTCATTTTTCCTTCCCAGTAAAGTTTTATGCTTTTCCCATCTTATGGGCACACA
                      ____________________________________________________________
consensus             TGACCATTCATTTTTCCTTCCCAGTAAAGTTTTATGCTTTTCCCATCTTATGGGCACACA