Contig 008680:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011J13Sequence615008680 (4)ref|XP_010104285.1|8e-94hypothetical protein L484_005388 [Morus notabilis] gb|EXB99570.1| hypothetical p
JMFN039G09Sequence625008680 (4)ref|XP_010104285.1|2e-105hypothetical protein L484_005388 [Morus notabilis] gb|EXB99570.1| hypothetical p
JMSF007G15Sequence374006393 (2)799008680 (4)ref|XP_011101883.1|8e-127PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC
JMSF051J03Sequence675006393 (2)ref|XP_011101883.1|1e-18PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC742008680 (4)ref|XP_011101883.1|3e-118PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC

Alignment

This contig is upended


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rJMSF007G15+                                                 GGGGTTTACGTCTTATTGGGC
                      ____________________________________________________________
consensus                                                    GGGGTTTACGTCTTATTGGGC
 
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rJMSF007G15+          TGAGGCCTGAGGAACTGGCTGAAAATCTTAAACTTCCATTCGAGTTCAGAGCTATGCCCG
rJMSF051J03+                                                TTCGAGTTCAGAGCTATGCCCG
                      ____________________________________________________________
consensus             TGAGGCCTGAGGAACTGGCTGAAAATCTTAAACTTCCATTCGAGTTCAGAGCTATGCCCG
 
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rJMSF007G15+          CTCAATCTGCACTAGTTGCCCCAACCGTGCTGGGTTGCCAACCTGGAGAAACGGTTATTG
rJMSF051J03+          CTCAATCTGCACTAGTTGCCCCANCCGTGCTGGGTTGCCAACCTGGAGAAACGGTTATTG
                      ____________________________________________________________
consensus             CTCAATCTGCACTAGTTGCCCCAACCGTGCTGGGTTGCCAACCTGGAGAAACGGTTATTG
 
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JMFN011J13-                                                  GCGTGTCAACAGTAAACCAAC
JMFN039G09-           TCAACTTTGCTTTCCAGCTTCATCACATGCCAGATGAGAGCGTGTCAACAGTAAACCAAC
rJMSF007G15+          TCAACTTTGCTTTCCAGCTTCATCACATGCCAGATGAGAGCGTGTCAACAGTAAACCAAC
rJMSF051J03+          TCAACTTTGCTTTCCAGCTTCATCACATGCCAGATGAGAGCGTGTCAACAGTAAACCAAC
                      ____________________________________________________________
consensus             TCAACTTTGCTTTCCAGCTTCATCACATGCCAGATGAGAGCGTGTCAACAGTAAACCAAC
 
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JMFN011J13-           GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
JMFN039G09-           GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
rJMSF007G15+          GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
rJMSF051J03+          GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
                      ____________________________________________________________
consensus             GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
 
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JMFN011J13-           AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
JMFN039G09-           AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
rJMSF007G15+          AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
rJMSF051J03+          AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
                      ____________________________________________________________
consensus             AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
 
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JMFN011J13-           ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
JMFN039G09-           ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
rJMSF007G15+          ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
rJMSF051J03+          ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
                      ____________________________________________________________
consensus             ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
 
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JMFN011J13-           ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
JMFN039G09-           ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
rJMSF007G15+          ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
rJMSF051J03+          ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
                      ____________________________________________________________
consensus             ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
 
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JMFN011J13-           AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
JMFN039G09-           AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
rJMSF007G15+          AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
rJMSF051J03+          AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
                      ____________________________________________________________
consensus             AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
 
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JMFN011J13-           TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
JMFN039G09-           TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
rJMSF007G15+          TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
rJMSF051J03+          TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
                      ____________________________________________________________
consensus             TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
 
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JMFN011J13-           ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
JMFN039G09-           ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
rJMSF007G15+          ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
rJMSF051J03+          ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
                      ____________________________________________________________
consensus             ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
 
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JMFN011J13-           AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
JMFN039G09-           AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
rJMSF007G15+          AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
rJMSF051J03+          AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
                      ____________________________________________________________
consensus             AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
 
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JMFN011J13-           TGGTGTGTGCCCCTCTCTATCAAGCTATGTCTGACTTTGTGACAATATTTTCGTTTTTAG
JMFN039G09-           TGGTGTGTGCCCCTCTCTATNCAGCTATGTCTGACTTTGTGACAATATTTTCGTTGTTAG
rJMSF007G15+          TGGTGTGTGCCCCTCTCTATCAAGCTATGTCTGACTTTGTGACAATATTTTCGTTTTTAG
rJMSF051J03+          TGGTGTGTGCCCCTCTCTATCAAGCTATGTCTGACTTTGTGACAATATTTTCGTTTTTAG
                      ____________________________________________________________
consensus             TGGTGTGTGCCCCTCTCTATCAAGCTATGTCTGACTTTGTGACAATATTTTCGTTTTTAG
 
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JMFN011J13-           ATTGGGATGCTCTGCATGATTTTGTATATTTAAGATATTACTCTCTCCGTCAAC      
JMFN039G09-           ATTGNGATGCTCTGCATGATTTTGT                                   
rJMSF007G15+          ATTGGGATGCTCTGCATGATTTTGTATATTTAAGATATTACTCTCTCCGTCAAC      
rJMSF051J03+          ATTGGGATGCTCTGCATGATTTTGTATATTTAAGATATTACTCTCTCCGTCAACTTTATT
                      ____________________________________________________________
consensus             ATTGGGATGCTCTGCATGATTTTGTATATTTAAGATATTACTCTCTCCGTCAACTTTATT