clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF009F13 | Sequence | 453 | 004858 (14) | ref|XP_009621642.1| | 8e-31 | PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis] | 745 | 008677 (4) | gb|KDO63219.1| | 1e-115 | hypothetical protein CISIN_1g0013012mg, partial [Citrus sinensis] gb|KDO63220.1| |
JMFF028B19 | Sequence | 549 | 004858 (14) | dbj|BAD00984.1| | 1e-36 | ubiquitin activating enzyme 2 [Nicotiana tabacum] | 595 | 008677 (4) | gb|KDO63219.1| | 8e-81 | hypothetical protein CISIN_1g0013012mg, partial [Citrus sinensis] gb|KDO63220.1| |
JMSF034H06 | Sequence | 652 | 004858 (14) | ref|XP_009621642.1| | 6e-70 | PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis] | 702 | 008677 (4) | ref|XP_009804780.1| | 1e-126 | PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana sylvestris] |
JMSF050N12 | Sequence | 687 | 004858 (14) | ref|XP_009621642.1| | 4e-69 | PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis] | 801 | 008677 (4) | dbj|BAD00984.1| | 4e-123 | ubiquitin activating enzyme 2 [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMSF034H06+ CTGGAATTGTGCAGAGAGAAATTGCCT
rJMSF050N12+ ATTGTGCAGAGAGNAANTGCCT
____________________________________________________________
consensus CTGGAATTGTGCAGAGAGAAATTGCCT
. : . : . : . : . : . :
rJMSF034H06+ GCAGGCTATAAGATGAACCCTATTCAGTTTGAGAAGGATGATGATACCAACTATCATATG
rJMFF009F13+ TTTGAGAAGGATGATGATACCAACTATCATATG
rJMSF050N12+ GCAGGCTATAAGATGAACCCTATTCAGTTTGAGAAGGATGATGATACCAACTATCATATG
____________________________________________________________
consensus GCAGGCTATAAGATGAACCCTATTCAGTTTGAGAAGGATGATGATACCAACTATCATATG
. : . : . : . : . : . :
rJMSF034H06+ GACATGATTGCTGGACTTGCCAACATGAGAGCAAGAAATTACAGCATCCCTGAGGTTGAC
rJMFF009F13+ GACATGATTGCTGGACTTGCCAACATGAGAGCAAGAAATTACAGCATCCCTGAGGTTGAC
rJMSF050N12+ GACATGATTGCTGGACTTGCCAACATGAGAGCAAGAAATTACAGCATCCCTGAGGTTGAC
____________________________________________________________
consensus GACATGATTGCTGGACTTGCCAACATGAGAGCAAGAAATTACAGCATCCCTGAGGTTGAC
. : . : . : . : . : . :
rJMSF034H06+ AAACTGAAAGCCAAATTCATTGCTGGGAGGATTATTCCCGCGATTGCTACTTCAACTGCT
rJMFF009F13+ AAACTGAAAGCCAAATTCATTGCTGGGAGGATTATTCCCGCGATTGCTACTTCAACTGCT
rJMFF028B19+ TGCT
rJMSF050N12+ AAACTGAAAGCCAAATTCATTGCTGGGAGGATTATTCCCGCGATTGCTACTTCAACTGCT
____________________________________________________________
consensus AAACTGAAAGCCAAATTCATTGCTGGGAGGATTATTCCCGCGATTGCTACTTCAACTGCT
. : . : . : . : . : . :
rJMSF034H06+ ATGGCAACAGGTCTTGTTTGCTTAGAGCTATACAAGGCTCTGGATGGACAACACAAGGTG
rJMFF009F13+ ATGGCAACAGGTCTTGTTTGCTTAGAGCTATACAAGGCTCTGGATGGACAACACAAGGTG
rJMFF028B19+ ATGGCAACAGGTCTGGTTTGCTTAGAGCTATACAAGGCTCTGGATGGACAACACAAGGTG
rJMSF050N12+ ATGGCAACAGGTCTTGTTTGCTTAGAGCTATACAAGGCTCTGGATGGACAACACAAGGTG
____________________________________________________________
consensus ATGGCAACAGGTCTTGTTTGCTTAGAGCTATACAAGGCTCTGGATGGACAACACAAGGTG
. : . : . : . : . : . :
rJMSF034H06+ GAGGATTACCGCAACACATTTGCAAATTTGGCACTCCCCTTGTTTTCAATCGCTGAGCCA
rJMFF009F13+ GAGGATTACCGCAACACATTTGCAAATTTGGCACTCCCCTTGTTTTCAATCGCTGAGCCA
rJMFF028B19+ GAGGATTACCGCAACACATTTGCAAATTTGGCACTCCCCTTGTTTTCAATCGCTGAGCCA
rJMSF050N12+ GAGGATTACCGCAACACATTTGCAAATTTGGCACTCCCCTTGTTTTCAATCGCTGAGCCA
____________________________________________________________
consensus GAGGATTACCGCAACACATTTGCAAATTTGGCACTCCCCTTGTTTTCAATCGCTGAGCCA
. : . : . : . : . : . :
rJMSF034H06+ GTACCACCCAAAGTGATCAAACATCAAGACATGAGCTGGACTGTCTGGGACAGGTGGATT
rJMFF009F13+ GTACCACCCAAAGTGATCAAACATCAAGACATGAGCTGGACTGTCTGGGACAGGTGGATT
rJMFF028B19+ GTACCACCCAAAGTGATCAAACATCAAGACATGAGCTGGACTGTCTGGGACAGGTGGATT
rJMSF050N12+ GTACCACCCAAAGTGATCAAACATCAAGACATGAGCTGGACTGTCTGGGACAGGTGGATT
____________________________________________________________
consensus GTACCACCCAAAGTGATCAAACATCAAGACATGAGCTGGACTGTCTGGGACAGGTGGATT
. : . : . : . : . : . :
rJMSF034H06+ TTGAGGGATAATCCGACACTGAAAGAGCTCATCAAGTGGCTCCAAGATAAAGGTCTAAAT
rJMFF009F13+ TTGAGGGATAATCCGACACTGAAAGAGCTCATCAAGTGGCTCCAAGATAAAGGTCTAAAT
rJMFF028B19+ TTGAGGGATAATCCGACACTGAAAGAGCTCATCAAGTGGCTCCAAGATAAAGGTCTAAAT
rJMSF050N12+ TTGAGGGATAATCCGACACTGAAAGAGCTCATCAAGTGGCTCCAAGATAAAGGTCTAAAT
____________________________________________________________
consensus TTGAGGGATAATCCGACACTGAAAGAGCTCATCAAGTGGCTCCAAGATAAAGGTCTAAAT
. : . : . : . : . : . :
rJMSF034H06+ GCCTATAGCATCTCTTACGGCAGCTGCTTACTTTACAATAGCATGTTCCCTAGGCACAAG
rJMFF009F13+ GCCTATAGCATCTCTTACGGCAGCTGCTTACTTTACAATAGCATGTTCCCTAGGCACAAG
rJMFF028B19+ GCCTATAGCATCTCTTACGGCAGCTGCTTACTTTACAATAGCATGTTCCCTAGGCACAAG
rJMSF050N12+ GCCTATAGCATCTCTTACGGCAGCTGCTTACTTTACAATAGCATGTTCCCTAGGCACAAG
____________________________________________________________
consensus GCCTATAGCATCTCTTACGGCAGCTGCTTACTTTACAATAGCATGTTCCCTAGGCACAAG
. : . : . : . : . : . :
rJMSF034H06+ GACCGCATAGATCGTAAGATGATGGATTTGGCCAGGGATGTTGCCAAGGCAGATTTCCCT
rJMFF009F13+ GACCGCATAGATCGTAAGATGATGGATTTGGCCAGGGATGTTGCCAAGGCAGATTTCCCT
rJMFF028B19+ GACCGCATAGATCGTAAGATGATGGATTTGGCCAGGGATGTTGCCAAGGCAGATTTCCCT
rJMSF050N12+ GACCGCATAGATCGTAAGATGATGGATTTGGCCAGGGATGTTGCCAAGGCAGATTTCCCT
____________________________________________________________
consensus GACCGCATAGATCGTAAGATGATGGATTTGGCCAGGGATGTTGCCAAGGCAGATTTCCCT
. : . : . : . : . : . :
rJMSF034H06+ CCATATCGTCGTCATTTTGACATTGTGGTGGCTTGTGAGGACGATGATGATAATGATGTT
rJMFF009F13+ CCATATCGTCGTCATTTTGACATTGTGGTGGCTTGTGAGGACGATGATGATAATGATGTT
rJMFF028B19+ CCATATCGTCGTCATTTTGACATTGTGGTGGCTTGTGAGGACGATGATGATAATGATGTT
rJMSF050N12+ CCATATCGTCGTCATTTTGACATTGTGGTGGCTTGTGAGGACGATGATGATAATGATGTT
____________________________________________________________
consensus CCATATCGTCGTCATTTTGACATTGTGGTGGCTTGTGAGGACGATGATGATAATGATGTT
. : . : . : . : . : . :
rJMSF034H06+ GATATACCTCAGATTTCTATATACTTCAGGTAGACCAGTTCGTTCCGACTTGTTGGAGGA
rJMFF009F13+ GATATACCTCAGATTTCTATATACTTCAGGTAGA-CAGTTCGTTCCGACTTGTTGGAGGA
rJMFF028B19+ GATATACCTCAGATTTCTATATACTTCAGGTAGA-CAGTTCGTTCCGACTTGTTGGAGGA
rJMSF050N12+ GATATACCTCAGATTTCTATATACTTCAGGTAGA-CAGTTCGTTCCGACTTGTTGGAGGA
____________________________________________________________
consensus GATATACCTCAGATTTCTATATACTTCAGGTAGA-CAGTTCGTTCCGACTTGTTGGAGGA
. : . : . : . : . : . :
rJMSF034H06+ ATTGGGTAGAAATTG
rJMFF009F13+ ATTGGGTAGAAATTGTTTAGATTATTGATGTAATGTTTGATATTGCAATTTAGACTCCTG
rJMFF028B19+ ATTGGGTAGAAATTGTTTAGATTATTGATGTAATGTTTGATATTGCAATTTAGACTCCTG
rJMSF050N12+ ATTGGGTAGAAATTGTTTAGATTATTGATGTAATGTTTGATATTGCAATTTAGACTCCTG
____________________________________________________________
consensus ATTGGGTAGAAATTGTTTAGATTATTGATGTAATGTTTGATATTGCAATTTAGACTCCTG
. : . : . : . : . : . :
rJMFF009F13+ TCTTTTTCGTCTAAGTATACATTTAGACATTCCGTGCATGCACGATCAAC
rJMFF028B19+ TCTTTTTCGTCTAAGTATACATTTAGACATTCCGTGCATGCACGATCAAC
rJMSF050N12+ TCTTTTTCGTCTAAGTATACATTTAGACATTCCGTGCATGCACGATCAACCAGTAGCTTT
____________________________________________________________
consensus TCTTTTTCGTCTAAGTATACATTTAGACATTCCGTGCATGCACGATCAACCAGTAGCTTT