| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020A17 | Sequence | 573 | 008669 (6) | gb|EPS74553.1| | 6e-33 | hypothetical protein M569_00200 [Genlisea aurea] | 746 | 008669 (6) | ref|XP_011073338.1| | 2e-103 | PREDICTED: stromal cell-derived factor 2-like protein [Sesamum indicum] |
| JMSF031K08 | Sequence | 627 | 008669 (6) | ref|XP_011073338.1| | 8e-44 | PREDICTED: stromal cell-derived factor 2-like protein [Sesamum indicum] | 741 | 008669 (6) | ref|XP_011073338.1| | 4e-102 | PREDICTED: stromal cell-derived factor 2-like protein [Sesamum indicum] |
| JMSF049K19 | Sequence | 726 | 008669 (6) | ref|XP_011073338.1| | 6e-65 | PREDICTED: stromal cell-derived factor 2-like protein [Sesamum indicum] | 713 | 008669 (6) | ref|XP_011073338.1| | 9e-95 | PREDICTED: stromal cell-derived factor 2-like protein [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF049K19- GAAG
____________________________________________________________
consensus GAAG
. : . : . : . : . : . :
JMSF031K08- ACCGATCAATATTGACGAAAGACGAAACATTAGATAGGGTGAAGCCATCACCGGAAA
JMFF020A17- ACCGATCAATATTGACGAAAGACGAAACATTAGATAGGGTGAAGCCATCACCGGAAA
JMSF049K19- ACCACCGATCAATATTGACGAAAGACGAAACATTAGATAGGGTGAAGCCATCACCGGAAA
____________________________________________________________
consensus ACCACCGATCAATATTGACGAAAGACGAAACATTAGATAGGGTGAAGCCATCACCGGAAA
. : . : . : . : . : . :
JMSF031K08- ACCCGACTCACAACCGGACCGTTGTCGGATCTCCACCGGAAATCCGCCAATAACTTCCAC
JMFF020A17- ACCCGACTCACAACCGGACCGTTGTCGGATCTCCACCGGAAATCCGCCAATAACTTCCAC
JMSF049K19- ACCCGACTCACAACCGGACCGTTGTCGGATCTCCACCGGAAATCCGCCAATAACTTCCAC
____________________________________________________________
consensus ACCCGACTCACAACCGGACCGTTGTCGGATCTCCACCGGAAATCCGCCAATAACTTCCAC
. : . : . : . : . : . :
JMSF031K08- CGTGGCTCCATCAGGCCCGCAAAAGCAGCAGCAGCATCAAAATCTCACCCGCAGAAAGTC
JMFF020A17- CGTGGCTCCATCAGGCCCGCAAAAGCAGCAGCAGCATCAAAATCTCACCCGCAGAAAGTC
JMSF049K19- CGTGGCTCCATCAGGCCCGCAAAAGCAGCAGCAGCATCAAAATCTCACCCGCAGAAAGTC
____________________________________________________________
consensus CGTGGCTCCATCAGGCCCGCAAAAGCAGCAGCAGCATCAAAATCTCACCCGCAGAAAGTC
. : . : . : . : . : . :
JMSF031K08- GGCACCGCCGTCTACATTCTCGAGTCAACCATCTTCCAGCCCGACCCGGATAGTGTACCG
JMFF020A17- GGCACCGCCGTCTACATTCTCGAGTCAACCATCTTCCAGCCCGACCCGGATAGTGTACCG
JMSF049K19- GGCACCGCCGTCTACATTCTCGAGTCAACCATCTTCCAGCCCGACCCGGATAGTGTACCG
____________________________________________________________
consensus GGCACCGCCGTCTACATTCTCGAGTCAACCATCTTCCAGCCCGACCCGGATAGTGTACCG
. : . : . : . : . : . :
JMSF031K08- CGAAGCCGCTTTGTCTGAAACCCTGCCGTTTTGGCAAAGTACTTGGTTCATAGTGCTGCT
JMFF020A17- CGAAGCCGCTTTGTCTGAAACCCTGCCGTTTTGGCAAAGTACTTGGTTCATAGTGCTGCT
JMSF049K19- CGAAGCCGCTTTGTCTGAAACCCTGCCGTTTTGGCAAAGTACTTGGTTCATAGTGCTGCT
____________________________________________________________
consensus CGAAGCCGCTTTGTCTGAAACCCTGCCGTTTTGGCAAAGTACTTGGTTCATAGTGCTGCT
. : . : . : . : . : . :
JMSF031K08- GCTATTGATGGCGCTCTCTCTCTTCGCTCTCGCCATCTTTCTCTTCCTTAACCTCGACGC
JMFF020A17- GCTATTGATGGCGCTCTCTCTCTTCGCTCTCGCCATCTTTCTCTTCCTTAACCTCGACGC
JMSF049K19- GCTATTGATGGCGCTCTCTCTCTTCGCTCTCGCCATCTTTCTCTTCCTTAACCTCAACGC
____________________________________________________________
consensus GCTATTGATGGCGCTCTCTCTCTTCGCTCTCGCCATCTTTCTCTTCCTTAACCTCGACGC
. : . : . : . : . : . :
JMSF031K08- CGATTTCAGCTCAACCCCTGTATCCGCTGCTTCTGAAGGTGTTCAGATTTCTTATGGGTC
JMFF020A17- CGATTTCAGCTCAACCCCTGTATCCGCTGCTTCTGAAGGTGTTCAGATTTCTTATGGGTC
JMSF049K19- CGATTTCAGCTCAACCCCTGTATCCGCTGCTTCTGAAGGTGTTCAGATTTCTTATGGGTC
rJMFF020A17+ TGTTCAGATTTCTTATGGGTC
____________________________________________________________
consensus CGATTTCAGCTCAACCCCTGTATCCGCTGCTTCTGAAGGTGTTCAGATTTCTTATGGGTC
. : . : . : . : . : . :
JMSF031K08- AGCAATCAAGTTGATGCATGAGAGGACTAAGTT-CCGGTTGCATTCACACGATGTGCCTT
JMFF020A17- AGCAATCAAGTTGATGCATGAGAGGACTAAGTT-CCGGTTGCATTCACACGATGTGCCTT
JMSF049K19- AGCAATCAAGTTGATGCATGAGAGGACTAAGTT-CCGGTTGCATTCACACGATGTGCCTT
rJMFF020A17+ AGCAATCAAGTTGATGCATGAGAGGACTAAGTTCCCGGTTGCATTCACACGATGTGCCTT
rJMSF031K08+ TGCATTCACACGATGTGCCTT
____________________________________________________________
consensus AGCAATCAAGTTGATGCATGAGAGGACTAAGTT-CCGGTTGCATTCACACGATGTGCCTT
. : . : . : . : . : . :
JMSF031K08- ATGGTTCTGGCAGCGGGCAGCAGTCAGTCACGGGTTTTCCTGGTGTAGATGATGCTAACA
JMFF020A17- ATGGTTCTGGCAGCGGGCAGCAGTCAGTCACGGGTTTTCCTGGTGTAGATGATGCTAACA
JMSF049K19- ATGGTTCTGGCAGCGGGCAGCAGTCAGTCACGGGTTTTCCTGGTGTAGATGATGCTAACA
rJMFF020A17+ ATGGTTCTGGCAGCGGGCAGCAGTCAGTCACGGGTTTTCCTGGTGTAGATGATGCTAACA
rJMSF031K08+ ATGGTTCTGGCAGCGGGCAGCAGTCAGTCACGGGTTTTCCTGGTGTAGATGATGCTAACA
rJMSF049K19+ TGGCAGCGGGCAGCAGTCAGTCACGGGTTTTCCTGGTGTAGATGATGCTAACA
____________________________________________________________
consensus ATGGTTCTGGCAGCGGGCAGCAGTCAGTCACGGGTTTTCCTGGTGTAGATGATGCTAACA
. : . : . : . : . : . :
JMSF031K08- GCTACTGGATTGTTAGGTCAGTTCTGGACTCACCTGCAAAGCAAGGTGATGCTATTAAAG
JMFF020A17- GCTACTGGATTGTTAGGTCAGTTCTGGACTC
JMSF049K19- GCTACTGGATTGTTAGGTCAGTTCTGGACTCACCTGCAAAGCAAGGTGATGCTATTAAAG
rJMFF020A17+ GCTACTGGATTGTTAGGTCAGTTCTGGACTCACCTGCAAAGCAAGGTGATGCTATTAAAG
rJMSF031K08+ GCTACTGGATTGTTAGGTCAGTTCTGGACTCACCTGCAAAGCAAGGTGATGCTATTAAAG
rJMSF049K19+ GCTACTGGATTGTTAGGTCAGTTCTGGACTCACCTGCAAAGCAAGGTGATGCTATTAAAG
____________________________________________________________
consensus GCTACTGGATTGTTAGGTCAGTTCTGGACTCACCTGCAAAGCAAGGTGATGCTATTAAAG
. : . : . : . : . : . :
JMSF031K08- CAGGAAGTATTATCAGACTTCAGCATATGA
JMSF049K19- CAGGAAGTATTATCAGACTTCAGCATATGAGGACAAGGAGATGGCTGCACAGTCACCTTC
rJMFF020A17+ CAGGAAGTATTATCAGACTTCAGCATATGAGGACAAGGAGATGGCTGCACAGTCACCTTC
rJMSF031K08+ CAGGAAGTATTATCAGACTTCAGCATATGAGGACAAGGAGATGGCTGCACAGTCACCTTC
rJMSF049K19+ CAGGAAGTATTATCAGACTTCAGCATATGAGGACAAGGAGATGGCTGCACAGTCACCTTC
____________________________________________________________
consensus CAGGAAGTATTATCAGACTTCAGCATATGAGGACAAGGAGATGGCTGCACAGTCACCTTC
. : . : . : . : . : . :
JMSF049K19- ATGCATCTCCCATATCTGGCANTCTGGAGGTTAGCTGCTTTGGTGATGACAATAATTCTG
rJMFF020A17+ ATGCATCTCCCATATCTGGCAATCTGGAGGTTAGCTGCTTTGGTGATGACAATAATTCTG
rJMSF031K08+ ATGCATCTCCCATATCTGGCAATCTGGAGGTTAGCTGCTTTGGTGATGACAATAATTCTG
rJMSF049K19+ ATGCATCTCCCATATCTGGCAATCTGGAGGTTAGCTGCTTTGGTGATGACAATAATTCTG
____________________________________________________________
consensus ATGCATCTCCCATATCTGGCAATCTGGAGGTTAGCTGCTTTGGTGATGACAATAATTCTG
. : . : . : . : . : . :
JMSF049K19- ATA
rJMFF020A17+ ATACTGGGGACTACTGGAAACTTGAAATTGAAGGAAATGGGAAAACTTGGAGGCAAGATC
rJMSF031K08+ ATACTGGGGACTACTGGAAACTTGAAATTGAAGGAAATGGGAAAACTTGGAGGCAAGATC
rJMSF049K19+ ATACTGGGGACTACTGGAAACTTGAAATTGAAGGAAATGGGAAAACTTGGAGGCAAGATC
____________________________________________________________
consensus ATACTGGGGACTACTGGAAACTTGAAATTGAAGGAAATGGGAAAACTTGGAGGCAAGATC
. : . : . : . : . : . :
rJMFF020A17+ AAAGGATCAGGCTTCGCCATGTGGACACTGCAGGGTATCTACACAGTCATGACAAGAAGT
rJMSF031K08+ AAAGGATCAGGCTTCGCCATGTGGACACTGCAGGGTATCTACACAGTCATGACAAGAAGT
rJMSF049K19+ AAAGGATCAGGCTTCGCCATGTGGACACTGCAGGGTATCTACACAGTCATGACAAGAAGT
____________________________________________________________
consensus AAAGGATCAGGCTTCGCCATGTGGACACTGCAGGGTATCTACACAGTCATGACAAGAAGT
. : . : . : . : . : . :
rJMFF020A17+ ACACCCGCATTGCTGGGGGCCAGCAAGAGGTTTGTGGCGTAAGAGAGAAGCGTCCTGATA
rJMSF031K08+ ACACCCGCATTGCTGGGGGCCAGCAAGAGGTTTGTGGCGTAAGAGAGAAGCGTCCTGATA
rJMSF049K19+ ACACCCGCATTGCTGGGGGCCAGCAAGAGGTTTGTGGCGTAAGAGAGAAGCGTCCTGATA
____________________________________________________________
consensus ACACCCGCATTGCTGGGGGCCAGCAAGAGGTTTGTGGCGTAAGAGAGAAGCGTCCTGATA
. : . : . : . : . : . :
rJMFF020A17+ ATGTTTGGCTGGCTGCAGAAGGGGTATATCTCCCAGTTACTACCGAAAGCAAGTAATGAA
rJMSF031K08+ ATGTTTGGCTGGCTGCAGAAGGGGTATATCTCCCAGTTACTACCGAAAGCAAGTAATGAA
rJMSF049K19+ ATGTTTGGCTGGCTGCAGAAGGGGTATATCTCCCAGTTACTACCGAAAGCAAGTAATGAA
____________________________________________________________
consensus ATGTTTGGCTGGCTGCAGAAGGGGTATATCTCCCAGTTACTACCGAAAGCAAGTAATGAA
. : . : . : . : . : . :
rJMFF020A17+ TACGATATTGTGTTAGTGTGATTGAAAGCTACTGCATAACTTTTACCCTTTAGTAATATC
rJMSF031K08+ TACGATATTGTGTTAGTGTGATTGAAAGCTACTGCATAACTTTTACCCTTTAGTAATATC
rJMSF049K19+ TACGATATTGTGTTAGTGTGATTGAAAGCTACTGCATAACTTTTACCCTTTAGTAATATC
____________________________________________________________
consensus TACGATATTGTGTTAGTGTGATTGAAAGCTACTGCATAACTTTTACCCTTTAGTAATATC
. : . : . : . : . : . :
rJMFF020A17+ TTCTTCCATTCCAAAAGAGGGCATAGGATGTTTTGTGCTATTTCCCTTTTGCTGCTCTTC
rJMSF031K08+ TTCTTCCATTCCAAAAGAGGGCATAGGATGTTTTGTGCTATTTCCCTTTTGCTGCTCTTC
rJMSF049K19+ TTCTTCCATTCCAAAAGAGGGCATAGGATGTTTTGTGCTATTTCCCTTTTGCTGCTCTTC
____________________________________________________________
consensus TTCTTCCATTCCAAAAGAGGGCATAGGATGTTTTGTGCTATTTCCCTTTTGCTGCTCTTC
. : . : . : . : . : . :
rJMFF020A17+ TGAGAGATTTTCAACCACTTATCAACTTCACATTATCATAAATGTTAAGGCAGGCTTAAA
rJMSF031K08+ TGAGAGATTTTCAACCACTTATCAACTTCACATTATCATAAATGTTAAGGCAGGCTTAAA
rJMSF049K19+ TGAGAGATTTTCAACCACTTATCAACTTCACATTATCATAAATGTTAAGGCAGGCTTAAA
____________________________________________________________
consensus TGAGAGATTTTCAACCACTTATCAACTTCACATTATCATAAATGTTAAGGCAGGCTTAAA
. : . : . : . : . : . :
rJMFF020A17+ CTTAT
rJMSF031K08+ CTTATAGAGTAGGACTCCTTATCAAAAATTGTTTCTGCTCATCATATACCAGTATGCACC
rJMSF049K19+ CTTATAGAGTAGGACTCTTTATCAAAAATTGTTTCTGCTCATCATATACCAGTATGCACC
____________________________________________________________
consensus CTTATAGAGTAGGACTCTTTATCAAAAATTGTTTCTGCTCATCATATACCAGTATGCACC