Contig 008665:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF048O07-                                           GAACATTACCTACAAACATCATAACTAC
                      ____________________________________________________________
consensus                                             GAACATTACCTACAAACATCATAACTAC
 
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JMFF003N20-           CTATTCTCCCAAGTTGTCGGCAACATGAAAACCCTCGCAATACTCTTATTCGCATTTTCC
JMSF048O07-           CTATTCTCCCAAGTTGTCGGCAACATGAAAACCCTCGCAATACTCTTATTCGCATTTTCC
                      ____________________________________________________________
consensus             CTATTCTCCCAAGTTGTCGGCAACATGAAAACCCTCGCAATACTCTTATTCGCATTTTCC
 
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JMFF003N20-           CTCTATCTCCTTCCCAACCCAACTCACTCTGCGTTCAATCCAATCCGCCTTCCCATCCGC
JMSF048O07-           CTCTATCTCCTTCCCAACCCAACTCACTCTGCGTTCAATCCAATCCGCCTTCCCATCCGC
                      ____________________________________________________________
consensus             CTCTATCTCCTTCCCAACCCAACTCACTCTGCGTTCAATCCAATCCGCCTTCCCATCCGC
 
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JMFF003N20-           CTTCCCACGGCCGACGCAGCAGTAGCCTCCGACAACACTCCGGTGGTGGACACCGACGGA
JMSF048O07-           CTTCCCACGGCCGACGCAGCAGTAGCCTCCGACAACACTCCGGTGGTGGACACCGACGGA
rJMSF048O07+                  GGCCGACGCAGCAGTAGCNTCCGACAACACTCCGGTGGTGGACACCGACGGA
                      ____________________________________________________________
consensus             CTTCCCACGGCCGACGCAGCAGTAGCCTCCGACAACACTCCGGTGGTGGACACCGACGGA
 
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JMFF003N20-           AACGAGCTCCGGGCCGGCGAAACTTACTACATAACCTCCATCGAAACGCCGCACTCCGCC
JMSF048O07-           AACGAGCTCCGGGCCGGCGAAACTTACTACATAACCTCCATCGAAACGCCGCACTCCGCC
rJMSF048O07+          AACGAGCTCCGGGCCGGCGAAACTTACTACATAACCTCCATCGAAACGCCGCACTCCGCC
                      ____________________________________________________________
consensus             AACGAGCTCCGGGCCGGCGAAACTTACTACATAACCTCCATCGAAACGCCGCACTCCGCC
 
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JMFF003N20-           TCCGCAGGAGTGCAACTTGCCTGGTTAAACTCTACAGCACAATGCGCGAGCAACGTGGTC
JMSF048O07-           TCCGCAGGAGTGCAACTTGCCTGGTTAAACTCTACAGCACAATGCGCGAGCAACGTGGTC
rJMSF048O07+          TCCGCAGGAGTGCAACTTGCCTGGTTAAACTCTACAGCACAATGCGCGAGCAACGTGGTC
                      ____________________________________________________________
consensus             TCCGCAGGAGTGCAACTTGCCTGGTTAAACTCTACAGCACAATGCGCGAGCAACGTGGTC
 
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JMFF003N20-           GTGCCGCGGTGCTTTTCGTTCGGCGACCCCATTAGGGTCAGGCCGACTGACCCCAACGCC
JMSF048O07-           GTGCCGCGGTGCTTTTCGTTCGGCGACCCCATTAGGGTCAGGCCGACTGACCCCAACGCC
rJMFF003N20+                                                             CCCAACGCC
rJMSF048O07+          GTGCCGCGGTGCTTTTCGTTCGGCGACCCCATTAGGGTCAGGCCGACTGACCCCAACGCC
                      ____________________________________________________________
consensus             GTGCCGCGGTGCTTTTCGTTCGGCGACCCCATTAGGGTCAGGCCGACTGACCCCAACGCC
 
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JMFF003N20-           GCCGTCGTCTTGCCGTCGAAGTTCCTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
JMSF048O07-           GCCGTCGTCTTGCCGTCGAAGTTCCTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
rJMFF003N20+          GCCGTNGTCTTGCCGTNGAAGTTCNTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
rJMSF048O07+          GCCGTCGTCTTGCCGTCGAAGTTCCTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
                      ____________________________________________________________
consensus             GCCGTCGTCTTGCCGTCGAAGTTCCTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
 
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JMFF003N20-           TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
JMSF048O07-           TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
rJMFF003N20+          TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
rJMSF048O07+          TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
                      ____________________________________________________________
consensus             TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
 
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JMFF003N20-           AACTCCGGCGAGTTTG                                            
JMSF048O07-           AACTCCGGCGAGTTTGTCTCCGACCTTAGCGGCCAGTTCAAGATTGTAGCCCAACCGGAC
rJMFF003N20+          AACTCCGGCGAGTTTGTCTCCGACCNTAGCGGCCAGTTCAAGATTGTAGCCCAACCGGAC
rJMSF048O07+          AACTCCGGCGAGTTTGTCTCCGACCTTAGCGGCCAGTTCAAGATTGTAGCCCAACCGGAC
                      ____________________________________________________________
consensus             AACTCCGGCGAGTTTGTCTCCGACCTTAGCGGCCAGTTCAAGATTGTAGCCCAACCGGAC
 
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JMSF048O07-           CCTAACACTTACAGAATCGATTATTGTCCGTTTGGCGGCCACAAATGCT           
rJMFF003N20+          CCTAACACTTACAGAATCGATTATTGTCCNTTTGGCGGCCACAAATGCT           
rJMSF048O07+          CCTAACACTTACAGAATCGATTATTGTCCGTTTGGCGGCCACAAATGCTTCTACGTTAGC
                      ____________________________________________________________
consensus             CCTAACACTTACAGAATCGATTATTGTCCGTTTGGCGGCCACAAATGCTTCTACGTTAGC
 
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rJMSF048O07+          CTAAACATCGACGAGTCAGCCGGGGCTGTGCGTTGGGTTCTGAGTGATAATAATTTTCTC
                      ____________________________________________________________
consensus             CTAAACATCGACGAGTCAGCCGGGGCTGTGCGTTGGGTTCTGAGTGATAATAATTTTCTC
 
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rJMSF048O07+          CCTGTATGGTTCAGGAAAACTAGAAACTGTTTAGATTTCACACTGTAAACCGGGGTGTGA
                      ____________________________________________________________
consensus             CCTGTATGGTTCAGGAAAACTAGAAACTGTTTAGATTTCACACTGTAAACCGGGGTGTGA
 
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rJMSF048O07+          GGTCAGAAATTTAGTTTTTCTGTGTTGGGTGTGGGATCTTGGAAGTTAATTATGCTAAAT
                      ____________________________________________________________
consensus             GGTCAGAAATTTAGTTTTTCTGTGTTGGGTGTGGGATCTTGGAAGTTAATTATGCTAAAT
 
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rJMSF048O07+          AAGTGACGTTAGTTGCAGGTTTCACAACTTATAACAGATCCTAGATTGTTGTGTACTGTT
                      ____________________________________________________________
consensus             AAGTGACGTTAGTTGCAGGTTTCACAACTTATAACAGATCCTAGATTGTTGTGTACTGTT