| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011H10 | Sequence | 559 | 008663 (6) | ref|XP_003633339.1| | 67.0 | PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera] | 530 | 008663 (6) | ref|XP_003633339.1| | 67.0 | PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera] |
| JMFF022L21 | Sequence | 478 | 008663 (6) | ref|XP_003633339.1| | 67.0 | PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera] | 530 | 008663 (6) | ref|XP_003633339.1| | 67.0 | PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera] |
| JMFN036N03 | Sequence | 505 | 008663 (6) | ref|XP_003633339.1| | 67.0 | PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera] | |||||
| JMSF048I10 | Sequence | 704 | 017953 | 674 | 008663 (6) | ref|XP_003633339.1| | 67.0 | PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera] | |||
This contig is upended
. : . : . : . : . : . :
rJMFF011H10+ ACTGTCATTATTCTTAGTATTT
JMFF022L21- ACTGTCATTATTCTTAGTATTT
rJMFF022L21+ ACTGTCATTATTCTTAGTATTT
JMFF011H10- ACTGTCATTATTCTTAGTATTT
rJMSF048I10+ TATTCTTAGTATTT
____________________________________________________________
consensus ACTGTCATTATTCTTAGTATTT
. : . : . : . : . : . :
rJMFF011H10+ CGACCGGAAATCCTAAAGCGAATTCTAAAAGACTCTGGGAAGCAAAGTAAGAAGCTAGAA
JMFF022L21- CGACCGGAAATCCTAAAGCGAATTCTAAAAGACTCTGGGAAGCAAAGTAAGAAGCTAGAA
rJMFF022L21+ CGACCGGAAATCCTAAAGCGAATTCTAAAAGACTCTGGGAAGCAAAGTAAGAAGCTAGAA
JMFF011H10- CGACCGGAAATCCTAAAGCGAATTCTAAAAGACTCTGGGAAGCAAAGTAAGAAGCTAGAA
JMFN036N03+ GGGAAGCAAAGTAAGAAGCTAGAA
rJMSF048I10+ CGACCGGAAATCCTAAAGCGAATTCTAAAAGACTCTGGGAAGCAAAGTAAGAAGCTAGAA
____________________________________________________________
consensus CGACCGGAAATCCTAAAGCGAATTCTAAAAGACTCTGGGAAGCAAAGTAAGAAGCTAGAA
. : . : . : . : . : . :
rJMFF011H10+ AGGGATCGCTATGAACTGCTTGAATAGAGTTTGGATAGCCGCCAGCGTGGCCGTCGTGAA
JMFF022L21- AGGGATCGCTATGAACTGCTTGAATAGAGTTTGGATAGCCGCCAGCGTGGCCGTCGTGAA
rJMFF022L21+ AGGGATCGCTATGAACTGCTTGAATAGAGTTTGGATAGCCGCCAGCGTGGCCGTCGTGAA
JMFF011H10- AGGGATCGCTATGAACTGCTTGAATAGAGTTTGGATAGCCGCCAGCGTGGCCGTCGTGAA
JMFN036N03+ AGGGATCGCTATGAACTGCTTGAATAGAGTTTGGATAGCCGCCAGCGTGGCCGTCGTGAA
rJMSF048I10+ AGGGATCGCTATGAACTGCTTGAATAGAGTTTGGATAGCCGCCAGCGTGGCCGTCGTGAA
____________________________________________________________
consensus AGGGATCGCTATGAACTGCTTGAATAGAGTTTGGATAGCCGCCAGCGTGGCCGTCGTGAA
. : . : . : . : . : . :
rJMFF011H10+ TAACCAATCGGGTCTCGGCCAGCGGTGGAAATCCGCCGACAGCCCGCCGCTCTCCGGCGT
JMFF022L21- TAACCAATCGGGTCTCGGCCAGCGGTGGAAATCCGCCGACAGCCCGCCGCTCTCCGGCGT
rJMFF022L21+ TAACCAATCGGGTCTCGGCCAGCGGTGGAAATCCGCCGACAGCCCGCCGCTCTCCGGCGT
JMFF011H10- TAACCAATCGGGTCTCGGCCAGCGGTGGAAATCCGCCGACAGCCCGCCGCTCTCCGGCGT
JMFN036N03+ TAACCAATCGGGTCTCGGCCAGCGGTGGAAATCCGCCGACAGCCCGCCGCTCTCCGGCGT
rJMSF048I10+ TAACCAATCGGGTCTCGGCCAGCGGTGGAAATCCGCCGACAGCCCGCCGCTCTCCGGCGT
____________________________________________________________
consensus TAACCAATCGGGTCTCGGCCAGCGGTGGAAATCCGCCGACAGCCCGCCGCTCTCCGGCGT
. : . : . : . : . : . :
rJMFF011H10+ TCCGGATGGGTTTACTGCAAGTGGGAGCCAAGACGAGAGGCGGCGGGCAGACGATTCGCT
JMFF022L21- TCCGGATGGGTTTACTGCAAGTGGGAGCCAAGACGAGAGGCGGCGGGCAGACGATTCGCT
rJMFF022L21+ TCCGGATGGGTTTACTGCAAGTGGGAGCCAAGACGAGAGGCGGCGGGCAGACGATTCGCT
JMFF011H10- TCCGGATGGGTTTACTGCAAGTGGGAGCCAAGACGAGAGGCGGCGGGCAGACGATTCGCT
JMFN036N03+ TCCGGATGGGTTTACTGCAAGTGGGAGCCAAGACGAGAGGCGGCGGGCAGACGATTCGCT
rJMSF048I10+ TCCGGATGGGTTTACTGCAAGTGGGAGCCAAGACGAGAGGCGGCGGGCAGACGATTCGCT
____________________________________________________________
consensus TCCGGATGGGTTTACTGCAAGTGGGAGCCAAGACGAGAGGCGGCGGGCAGACGATTCGCT
. : . : . : . : . : . :
rJMFF011H10+ CCGGCAAGTCATGTTCTTGAACTGCTGGGGACAGAGCTAATCAGAAAAACCTCTCAACGG
JMFF022L21- CCGGCAAGTCATGTTCTTGAACTGCTGGGGACAGAGCTAATCAGAAAAACCTCTCAACGG
rJMFF022L21+ CCGGCAAGTCATGTTCTTGAACTGCTGGGGACAGAGCTAATCAGAAAAACCTCTCAACGG
JMFF011H10- CCGGCAAGTCATGTTCTTGAACTGCTGGGGACAGAGCTAATCAGAAAAACCTCTCAACGG
JMFN036N03+ CCGGCAAGTCATGTTCTTGAACTGCTGGGGACAGAGCTAATCAGAAAAACCTCTCAACGG
rJMSF048I10+ CCGGCAAGTCATGTTCTTGAACTGCTGGGGACAGAGCTAATCAGAAAAACCTCTCAACGG
____________________________________________________________
consensus CCGGCAAGTCATGTTCTTGAACTGCTGGGGACAGAGCTAATCAGAAAAACCTCTCAACGG
. : . : . : . : . : . :
rJMFF011H10+ CGATCGGAGCTCTTCGTTGGGCCCCGTACCCGGATCGACCCGTTCTGTAGGATATTGGGC
JMFF022L21- CGATCGGAGCTCTTCGTTGGGCCCCGTACCCGGATCGACCCGTTCTGTAGGATATTGGGC
rJMFF022L21+ CGATCGGAGCTCTTCGTTGGGCCCCGTACCCGGATCGACCCGTTCTGTAGGATATTGGGC
JMFF011H10- CGATCGGAGCTCTTCGTTGGGCCCCGTACCCGGATCGACCCGTTCTGTAGGATATTGGGC
JMFN036N03+ CGATCGGAGCTCTTCGTTGGGCCCCGTACCCGGATCGACCCGTTCTGTAGGATATTGGGC
rJMSF048I10+ CGATCGGAGCTCTTCGTTGGGCCCCGTACCCGGATCGACCCGTTCTGTAGGATATTGGGC
____________________________________________________________
consensus CGATCGGAGCTCTTCGTTGGGCCCCGTACCCGGATCGACCCGTTCTGTAGGATATTGGGC
. : . : . : . : . : . :
rJMFF011H10+ CAGAATTTTCTAGGCCCATTGGACTAAGCCTGGAATGGCAAATCTGCAATGCTATGTTTT
JMFF022L21- CAGAATTTTCTAGGCCCATTGGACTAAGCCTGGAATGGCAAATCTGCAATGCTATGTTTT
rJMFF022L21+ CAGAATTTTCTAGGCCCATTGGACTAAGCCTGGAATGGCAAATCTGCAATGCTATGTTTT
JMFF011H10- CAGAATTTTCTAGGCCCATTGGACTAAGCCTGGAATGGCAAATCTGCAATGCTATGTTTT
JMFN036N03+ CAGAATTTTCTAGGCCCATTGGACTAAGCCTGGAATGGCAAATCTGCAATGCTATGTTTT
rJMSF048I10+ CAGAATTTTCTAGGCCCATTGGACTAAGCCTGGAATGGCAAATCTGCAATGCTATGTTTT
____________________________________________________________
consensus CAGAATTTTCTAGGCCCATTGGACTAAGCCTGGAATGGCAAATCTGCAATGCTATGTTTT
. : . : . : . : . : . :
rJMFF011H10+ ATTTTCATTTTATGTATATAGTTGAACCGAATGTAAAGCAATGGCCCATAGGCCACATAG
JMFF022L21- ATTTTCATTTTATGTATATAGTTGAACCGAATGTAA
rJMFF022L21+ ATTTTCATTTTATGTATATAGTTGAACCGAATGTAAAGCAATGGCCCATAGGCCACATAG
JMFF011H10- ATTTTCATTTTATGTATATAGTTGAACCGAATGTAAAGCAATGGCCCATAGGCCACATAG
JMFN036N03+ ATTTTCATTTTATGTATATAGTTGAACCGAATGTAAAGCAATGGCCCATAGGCCACATAG
rJMSF048I10+ ATTTTCATTTTATGTATATAGTTGAACCGAATGTAAAGCAATGGCCCATAGGCCACATAG
____________________________________________________________
consensus ATTTTCATTTTATGTATATAGTTGAACCGAATGTAAAGCAATGGCCCATAGGCCACATAG
. : . : . : . : . : . :
rJMFF011H10+ TACATGACTAATGTAAATTATGCCAATT
rJMFF022L21+ TACATGACTAATGTAAATTATGCCAATT
JMFF011H10- TACATGACTAATGTAAATTATGCCAATTTTATAAAATTATATTTTGTA
JMFN036N03+ TACATGACTAATGTAAATTATGCCAATTTTATAAAATTATATTTTGTA
rJMSF048I10+ TACATGACTAATGTAAATTATGCCAATTTTATAAAATTATATTTTGTATAACACCAATCG
____________________________________________________________
consensus TACATGACTAATGTAAATTATGCCAATTTTATAAAATTATATTTTGTATAACACCAATCG
. : . : . : . : . : . :
rJMSF048I10+ TTATTGTGTGGACCATAACCGTATTTTGTATACTGTAAAATAATGTATATTCAGTACAAA
____________________________________________________________
consensus TTATTGTGTGGACCATAACCGTATTTTGTATACTGTAAAATAATGTATATTCAGTACAAA
. : . : . : . : . : . :
rJMSF048I10+ AATAATGTATATTATTTTCAGGAGATGTATATTAATTTTGTACTGAGTGTACCATTATAT
____________________________________________________________
consensus AATAATGTATATTATTTTCAGGAGATGTATATTAATTTTGTACTGAGTGTACCATTATAT