Contig 008661:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002H17Sequence155008661 (5)ref|XP_006365040.1|7e-06PREDICTED: glycine cleavage system H protein 2, mitochondrial-like [Solanum tub
JMFF009I04Sequence303008661 (5)emb|CDP11250.1|9e-43unnamed protein product [Coffea canephora]
JMSF048A11Sequence713008661 (5)emb|CDP11250.1|1e-84unnamed protein product [Coffea canephora]750008661 (5)emb|CDP11250.1|2e-84unnamed protein product [Coffea canephora]
JMSF049A11Sequence481007302 (11)emb|CDP14057.1|2e-69unnamed protein product [Coffea canephora]627008661 (5)emb|CDP11250.1|1e-74unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF002H17- ACATTCAAGACTTAACAAAGGGCGGCGTGCTTCTTT
JMSF048A11- AGACTTAACAAAGGGCGGCGTGCTTCTTT
rJMSF048A11+ AGACTTAACAAAGGGCGGCGTGCTTCTTT
                      ____________________________________________________________
consensus ACATTCAAGACTTAACAAAGGGCGGCGTGCTTCTTT
 
. : . : . : . : . : . :
JMFF002H17- CTGTGTGTATTCGAAGCGGCGGTGTGAGTAGAGATGGCTATGCGGGTTTGGGCTTCAAGG
rJMFF009I04+ ATTCGAAGCGGCGGTATGAGTAGAGATGGCTATGCGGGTTTGGGCTTCAAGG
JMSF048A11- CTGTGTGTATTCGAAGCGGCGGTGTGAGTAGAGATGGCTATGCGGGTTTGGGCTTCAAGG
rJMSF048A11+ CTGTGTGTATTCGAAGCGGCGGTGTGAGTAGAGATGGCTATGCGGGTTTGGGCTTCAAGG
                      ____________________________________________________________
consensus CTGTGTGTATTCGAAGCGGCGGTGTGAGTAGAGATGGCTATGCGGGTTTGGGCTTCAAGG
 
. : . : . : . : . : . :
JMFF002H17- GCTGCTTCTTACCTTAGGATCTCGGCTTTCCCCAGAGGCTTTGCTACTGTTGCCAAGGA
rJMFF009I04+ GCTGCTTCTTACCTTAGGATCTCGGCTTTCCCCAGAGGCTTTGCTACTGTTGCCAAGGAT
JMSF048A11- GCTGCTTCTTACCTTAGGATCTCGGCTTTCCCCAGAGGCTTTGCTACTGTTGCCAAGGAT
rJMSF049A11+ GCTTCTTACCNTAGGATCTCGGCTTTCCCCAGAGGCTTTGCTACTGTTGCCAAGGAT
rJMSF048A11+ GCTGCTTCTTACCTTAGGATCTCGGCTTTCCCCAGAGGCTTTGCTACTGTTGCCAAGGAT
                      ____________________________________________________________
consensus GCTGCTTCTTACCTTAGGATCTCGGCTTTCCCCAGAGGCTTTGCTACTGTTGCCAAGGAT
 
. : . : . : . : . : . :
rJMFF009I04+ TTGAAGTATGCAGACACCCATGAATGGGTTAAAGTTGATGGTAGTTCTGCCACTGTTGGC
JMSF048A11- TTGAAGTATGCAGACACCCATGAATGGGTTAAAGTTGATGGTAGTTCTGCCACTGTTGGC
rJMSF049A11+ TTGAAGTATGCAGACACCCATGAATGGGTTAAAGTTGATNGTAGTTCTGCCACTGTTGGC
rJMSF048A11+ TTGAAGTATGCAGACACCCATGAATGGGTTAAAGTTGATGGTAGTTCTGCCACTGTTGGC
                      ____________________________________________________________
consensus TTGAAGTATGCAGACACCCATGAATGGGTTAAAGTTGATGGTAGTTCTGCCACTGTTGGC
 
. : . : . : . : . : . :
rJMFF009I04+ ATCACCTATCATGCTCAGGNANATATAGGCGATGTGGTCTTTGNTGAGTTACCGGAAGTT
JMSF048A11- ATCACCTATCATGCTCAGGATCATCTAGGCGATGTGGTCTTTGTTGAGTTACCGGAAGTT
rJMSF049A11+ ATCACCTATCATGNTCAGGATCATTTAGGCGATGTGGTCTTTNTTGAGTTACCGGAAGTT
rJMSF048A11+ ATCACCTATCATGCTCAGGATCATCTAGGCGATGTGGTCTTTGTTGAGTTACCGGAAGTT
                      ____________________________________________________________
consensus ATCACCTATCATGCTCAGGATCATCTAGGCGATGTGGTCTTTGTTGAGTTACCGGAAGTT
 
. : . : . : . : . : . :
rJMFF009I04+ GGGGTTGATGTAAAACAGGGCGACAGTTTTGGCGCTGTTGAAAGTGTTAAGGCCTCCAGT
JMSF048A11- GGGGTTGATGTAAAACAGGGCGACAGTTTTGGCGCTGTTGAAAGTGTTAAGGCCTCCAGT
rJMSF049A11+ GGGGTTGATGTANAACAGGGCGACAGTTTTGGCGCTGTTGAAAGTGTTAAGGCCTCCAGT
rJMSF048A11+ GGGGTTGATGTAAAACAGGGCGACAGTTTTGGCGCTGTTGAAAGTGTTAAGGCCTCCAGT
                      ____________________________________________________________
consensus GGGGTTGATGTAAAACAGGGCGACAGTTTTGGCGCTGTTGAAAGTGTTAAGGCCTCCAGT
 
. : . : . : . : . : . :
rJMFF009I04+ GANGTCAATTC
JMSF048A11- GATGTCAATTCTCCTATTTCTGGCAAGGTGGTTGCAGTTAATGAGAAACTCAATGACTCC
rJMSF049A11+ GATGTCAATTCTCCTATTTCTGGCAAGGTGGTTGCAGTTAATGAGAAACTCAATGACTCC
rJMSF048A11+ GATGTCAATTCTCCTATTTCTGGCAAGGTGGTTGCAGTTAATGAGAAACTCAATGACTCC
                      ____________________________________________________________
consensus GATGTCAATTCTCCTATTTCTGGCAAGGTGGTTGCAGTTAATGAGAAACTCAATGACTCC
 
. : . : . : . : . : . :
JMSF048A11- CCAGGCCTGGTTAACGGGAGCCCGTATGAAGATGGGTGGATCATGAAGGTGGAGGTAAGC
rJMSF049A11+ CCAGGCCTGGTTAACGGGAGCCCGTATGAAGATGGGTGGATCATGAAGGTGGAGGTAAGC
rJMSF048A11+ CCAGGCCTGGTTAACGGGAGCCCGTATGAAGATGGGTGGATCATGAAGGTGGAGGTAAGC
                      ____________________________________________________________
consensus CCAGGCCTGGTTAACGGGAGCCCGTATGAAGATGGGTGGATCATGAAGGTGGAGGTAAGC
 
. : . : . : . : . : . :
JMSF048A11- GATGCGAAGGAACTGAGTTCCTTGATGGATGCGGAGCAGTATTCGAAGTTTTGTGAAGAA
rJMSF049A11+ GATGCGAAGGAACTGAGTTCCTTGATGGATGCGGAGCAGTATTCGAAGTTTTGTGAAGAA
rJMSF048A11+ GATGCGAAGGAACTGAGTTCCTTGATGGATGCGGAGCAGTATTCGAAGTTTTGTGAAGAA
                      ____________________________________________________________
consensus GATGCGAAGGAACTGAGTTCCTTGATGGATGCGGAGCAGTATTCGAAGTTTTGTGAAGAA
 
. : . : . : . : . : . :
JMSF048A11- GAAGATGCAAAGCATTGAGGGAGGGTTGCTTCACAGTACAAAGCTGATGACAAGAAAAAG
rJMSF049A11+ GAAGATGCAAAGCATTGAGGGAGGGNTGCTTCACAGTACAAANCTGATGACAAGAAAAAN
rJMSF048A11+ GAAGATGCAAAGCATTGAGGGAGGGTTGCTTCACAGTACAAAGCTGATGACAAGAAAAAG
                      ____________________________________________________________
consensus GAAGATGCAAAGCATTGAGGGAGGGTTGCTTCACAGTACAAAGCTGATGACAAGAAAAAG
 
. : . : . : . : . : . :
JMSF048A11- TTGTTAAAACTTTCTAAACTTGTGGATTCTTAAGGTTCCTATCAATGGCTGCTCAATCAC
rJMSF049A11+ TTGTTAAAACTTTCTAAACTTGTGGATTCTTAAGGNTCCTATCAATGGCTGCTCAATCAC
rJMSF048A11+ TTGTTAAAACTTTCTAAACTTGTGGATTCTTAAGGTTCCTATCAATGGCTGCTCAATCAC
                      ____________________________________________________________
consensus TTGTTAAAACTTTCTAAACTTGTGGATTCTTAAGGTTCCTATCAATGGCTGCTCAATCAC
 
. : . : . : . : . : . :
JMSF048A11- CATAGGTCTTTTTAGGTTTATTGGTTTTGGTTTCTGAGTTGTCATTGGTATGGTGTTGCA
rJMSF049A11+ CNTANGTCTTTTTAGGTTTATTGGTTTTGGTTTCTGAGTTNTCATTGGTATGGTGTTGCA
rJMSF048A11+ CATAGGTCTTTTTAGGTTTATTGGTTTTGGTTTCTGAGTTGTCATTGGTATGGTGTTGCA
                      ____________________________________________________________
consensus CATAGGTCTTTTTAGGTTTATTGGTTTTGGTTTCTGAGTTGTCATTGGTATGGTGTTGCA
 
. : . : . : . : . : . :
rJMSF049A11+ TCAAGTGCACAACACNTTGCAATCAAAATG
rJMSF048A11+ -CAAGTGCACAACACATTGCAATCAAAATGTGCAGTACTTTGATGGTTTGATTTTAAGTG
                      ____________________________________________________________
consensus TCAAGTGCACAACACATTGCAATCAAAATGTGCAGTACTTTGATGGTTTGATTTTAAGTG