| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003C07 | Sequence | 519 | 008647 (12) | emb|CAN80358.1| | 9e-76 | hypothetical protein VITISV_002027 [Vitis vinifera] | 698 | 008647 (12) | ref|XP_010277100.1| | 5e-89 | PREDICTED: casein kinase II subunit alpha [Nelumbo nucifera] |
| JMSF013B21 | Sequence | 478 | 008647 (12) | emb|CAN80358.1| | 1e-74 | hypothetical protein VITISV_002027 [Vitis vinifera] | 744 | 008647 (12) | ref|XP_010277100.1| | 1e-87 | PREDICTED: casein kinase II subunit alpha [Nelumbo nucifera] |
| JMSF016K01 | Sequence | 462 | 008647 (12) | emb|CAN80358.1| | 8e-55 | hypothetical protein VITISV_002027 [Vitis vinifera] | 745 | 008647 (12) | ref|XP_010277100.1| | 2e-153 | PREDICTED: casein kinase II subunit alpha [Nelumbo nucifera] |
| JMSF023A09 | Sequence | 665 | 008647 (12) | emb|CAN80358.1| | 5e-105 | hypothetical protein VITISV_002027 [Vitis vinifera] | 753 | 008647 (12) | ref|XP_010277100.1| | 4e-52 | PREDICTED: casein kinase II subunit alpha [Nelumbo nucifera] |
| JMSF029A14 | Sequence | 693 | 008647 (12) | ref|XP_011069787.1| | 2e-114 | PREDICTED: casein kinase II subunit alpha-like [Sesamum indicum] | 755 | 008647 (12) | ref|XP_010277100.1| | 7e-81 | PREDICTED: casein kinase II subunit alpha [Nelumbo nucifera] |
| JMSF046L23 | Sequence | 696 | 009539 (2) | emb|CAN80358.1| | 1e-28 | hypothetical protein VITISV_002027 [Vitis vinifera] | 709 | 008647 (12) | ref|XP_010277100.1| | 2e-63 | PREDICTED: casein kinase II subunit alpha [Nelumbo nucifera] |
| JMSF053O11 | Sequence | 662 | 009539 (2) | emb|CAN80358.1| | 1e-28 | hypothetical protein VITISV_002027 [Vitis vinifera] | 880 | 008647 (12) | ref|XP_010277100.1| | 4e-139 | PREDICTED: casein kinase II subunit alpha [Nelumbo nucifera] |
This contig is upended
. : . : . : . : . : . :
JMSF023A09- GATAACATAACAGGCGTG
JMSF016K01- GTG
JMSF029A14- GTG
____________________________________________________________
consensus GATAACATAACAGGCGTG
. : . : . : . : . : . :
JMSF023A09- GGAACGTGGGGTGGAGAGGGACAACATATAANAAGGCTGGCTGGCTGGCTGGCGGGCGAG
JMFF003C07- GACAACATATAAAAAGGCTGGCTGGCTGGCTGGCGGGCGAG
JMSF016K01- GGAACGTGGGGTGGAGAGGGACAACATATAAAAAGGCTGGCTGGCTGGCTGGCGGGCGAG
JMSF029A14- GGAACGTGGGGTGGAGAGGGACAACATATAAAAAGGCTGGCTGGCTGGCTGGCGGGCGAG
____________________________________________________________
consensus GGAACGTGGGGTGGAGAGGGACAACATATAAAAAGGCTGGCTGGCTGGCTGGCGGGCGAG
. : . : . : . : . : . :
JMSF023A09- AGAGGAACTATAGCTTCAGATCCTTCGCCTCATCGGCGAGCAATCGGGTATGTCTCAAGC
JMFF003C07- AGAGGAACTATAGCTTCAGATCCTTCGCCTCATCGGCGAGCAATCGGGTATGTCTCAAGC
JMSF013B21- GAGGAACTATAGCTTCAGATCCTTCGCCTCATCGGCGAGCAATCGGGTATGTCTCAAGC
JMSF016K01- AGAGGAACTATAGCTTCAGATCCTTCGCCTCATCGGCGAGCAATCGGGTATGTCTCAAGC
JMSF029A14- AGAGGAACTATAGCTTCAGATCCTTCGCCTCATCGGCGAGCAATCGGGTATGTCTCAAGC
____________________________________________________________
consensus AGAGGAACTATAGCTTCAGATCCTTCGCCTCATCGGCGAGCAATCGGGTATGTCTCAAGC
. : . : . : . : . : . :
JMSF023A09- ACGAGTCTACGCTGACGTCAACGTTCACCGTCCTAAGGATTATTGGGACTATGAAGCTCT
JMFF003C07- ACGAGTCTACGCTGACGTCAACGTTCACCGTCCTAAGGATTATTGGGACTATGAAGCTCT
JMSF013B21- ACGAGTCTACGCTGACGTCAACGTTCACCGTCCTAAGGATTATTGGGACTATGAAGCTCT
JMSF016K01- ACGAGTCTACGCTGACGTCAACGTTCACCGTCCTAAGGATTATTGGGACTATGAAGCTCT
JMSF029A14- ACGAGTCTACGCTGACGTCAACGTTCACCGTCCTAAGGATTATTGGGACTATGAAGCTCT
____________________________________________________________
consensus ACGAGTCTACGCTGACGTCAACGTTCACCGTCCTAAGGATTATTGGGACTATGAAGCTCT
. : . : . : . : . : . :
JMSF023A09- TACCGTTCAATGGGGTGATCAGGATGACTATGAAGTTGTTCGGAAAGTGGGAAGAGGAAA
JMFF003C07- TACCGTTCAATGGGGTGATCAGGATGACTATGAAGTTGTTCGGAAAGTGGGAAGAGGAAA
JMSF013B21- TACCGTTCAATGGGGTGATCAGGATGACTATGAAGTTGTTCGGAAAGTGGGAAGAGGAAA
JMSF016K01- TACCGTTCAATGGGGTGATCAGGATGACTATGAAGTTGTTCGGAAAGTGGGAAGAGGAAA
JMSF029A14- TACCGTTCAATGGGGTGATCAGGATGACTATGAAGTTGTTCGGAAAGTGGGAAGAGGAAA
____________________________________________________________
consensus TACCGTTCAATGGGGTGATCAGGATGACTATGAAGTTGTTCGGAAAGTGGGAAGAGGAAA
. : . : . : . : . : . :
JMSF023A09- ATACAGTGAGGTCTTTGAAGGAGTAAATATCACCAACAATGAGAAGTGCATCATCAAAAT
JMFF003C07- ATACAGTGAGGTCTTTGAAGGAGTAAATATCACCAACAATGAGAAGTGCATCATCAAAAT
JMSF013B21- ATACAGTGAGGTCTTTGAAGGAGTAAATATCACCAACAATGAGAAGTGCATCATCAAAAT
JMSF016K01- ATACAGTGAGGTCTTTGAAGGAGTAAATATCACCAACAATGAGAAGTGCATCATCAAAAT
JMSF029A14- ATACAGTGAGGTCTTTGAAGGAGTAAATATCACCAACAATGAGAAGTGCATCATCAAAAT
____________________________________________________________
consensus ATACAGTGAGGTCTTTGAAGGAGTAAATATCACCAACAATGAGAAGTGCATCATCAAAAT
. : . : . : . : . : . :
JMSF023A09- ACTTAAACCCGTGAAAAAGAAGAAGATAAAAAGGGAAATAAAAATACTTCAGAATCTTTG
JMFF003C07- ACTTAAACCCGTGAAAAAGAAGAAGATAAAAAGGGAAATAAAAATACTTCAGAATCTTTG
JMSF013B21- ACTTAAACCCGTGAAAAAGAAGAAGATAAAAAGGGAAATAAAAATACTTCAGAATCTTTG
JMSF016K01- ACTTAAACCCGTGAAAAAGAAGAAGATAAAAAGGGAAATAAAAATACTTCAGAATCTTTG
JMSF029A14- ACTTAAACCCGTGAAAAAGAAGAAGATAAAAAGGGAAATAAAAATACTTCAGAATCTTTG
____________________________________________________________
consensus ACTTAAACCCGTGAAAAAGAAGAAGATAAAAAGGGAAATAAAAATACTTCAGAATCTTTG
. : . : . : . : . : . :
JMSF023A09- TGGAGGCCCAAATATTGTAAAACTCTATGATATTGTCAGAGACCAGCACTCAAAAACTCC
JMFF003C07- TGGAGGCCCAAATATTGTAAAACTCTATGATATTGTCAGAGACCAGCACTCAAAAACTCC
JMSF013B21- TGGAGGCCCAAATATTGTAAAACTCTATTATATTGTCAGAGACCAGCACTCAAAAACTCC
JMSF016K01- TGGAGGCCCAAATATTGTAAAACTCTATGATATTGTCAGAGACCAGCACTCAAAAACTCC
JMSF029A14- TGGAGGCCCAAATATTGTAAAACTCTATGATATTGTCAGAGACCAGCACTCAAAAACTCC
____________________________________________________________
consensus TGGAGGCCCAAATATTGTAAAACTCTATGATATTGTCAGAGACCAGCACTCAAAAACTCC
. : . : . : . : . : . :
JMSF023A09- CAGTTTGATTTTTGAATATGTGAACAGTACAGATTTCAAAGTCTTGTATCCGACACTGAC
JMFF003C07- CAGTTTGATTTTTGAATATGTGAACAGTACAGATTTCAAAGTCTTGTATCCGACACTGAC
JMSF013B21- CAGTTTGATTTTTGAATATGTGAACAGTACAGATTTCAAAGTCTTGTATCCGACACTGAC
JMSF016K01- CAGTTTGATTTTTGAATATGTGAACAGTACAGATTTCA
JMSF029A14- CAGTTTGATTTTTGAATATGTGAACAGTACAGATTTCAAAGTCTTGTATCCGACACTGAC
rJMSF016K01+ TATCCGACACTGAC
____________________________________________________________
consensus CAGTTTGATTTTTGAATATGTGAACAGTACAGATTTCAAAGTCTTGTATCCGACACTGAC
. : . : . : . : . : . :
JMSF023A09- TGATTATGACATCCGCTACTACATTTATGAGCTTCTCAAGGCACTGGATTATTGCCATTC
JMFF003C07- TGATTATGACATCCGCTACTACATTTATGAGCTTCTCAAGGCACTGGATTATTGCCAT
JMSF013B21- TGATTATGACATCCGCTACTACATTTATGAGCTTCTCAAGGCACTGGATTATTGCCAT
JMSF029A14- TGATTATGACATCCGCTACTACATTTATGAGCTTCTCAAGGCACTGGATTATTGCCATTC
rJMSF016K01+ TGATTATGACATCCGCTACTACATTTATGAGCTTCTCAAGGCACTGGATTATTGCCATTC
rJMSF053O11+ AGGCACTGGATTATTGCCATTC
____________________________________________________________
consensus TGATTATGACATCCGCTACTACATTTATGAGCTTCTCAAGGCACTGGATTATTGCCATTC
. : . : . : . : . : . :
JMSF023A09- ACAAGGAATAATGCACAGAGATGTTAAACCTCACAATGTCATGATTGATCATGAATTAAG
JMSF029A14- ACAAGGAATAATGCACAGAGATGTTAAACCTCACAATGTCATGATTGATCATGAATTAAG
rJMSF016K01+ ACAAGGAATAATGCACAGAGATGTTAAACCTCACAATGTCATGATTGATCATGAATTAAG
rJMSF053O11+ ACAAGGAATAATGCACAGAGATGTTAAACCTCACAATGTCATGATTGATCATGAATTAAG
____________________________________________________________
consensus ACAAGGAATAATGCACAGAGATGTTAAACCTCACAATGTCATGATTGATCATGAATTAAG
. : . : . : . : . : . :
JMSF023A09- AAAACTTCGTTTGATTGATTGGGGTCTTGCTGAGTTTTATCATCCTG
JMSF029A14- AAAACTTCGTTTGATTGATTGGGGTCTTGCTGAGTTTTATCATCCTGGTAAAGAATACAA
rJMSF016K01+ AAAACTTCGTTTGATTGATTGGGGTCTTGCTGAGTTTTATCATCCTGGTAAAGAATACAA
rJMSF053O11+ AAAACTTCGTTTGATTGATTGGGGTCTTGCTGAGTTTTATCATCCTGGTAAAGAATACAA
____________________________________________________________
consensus AAAACTTCGTTTGATTGATTGGGGTCTTGCTGAGTTTTATCATCCTGGTAAAGAATACAA
. : . : . : . : . : . :
JMSF029A14- TGTCAGAGTAGCCTCAAGGTACTTT
rJMSF016K01+ TGTCAGAGTAGCCTCAAGGTACTTTAAGGGGCCTGAACTACTCGTGGATTTGCAAGACTA
rJMSF053O11+ TGTCAGAGTAGCCTCAAGGTACTTTAAGGGGCCTGAACTACTCGTGGATTTGCAAGACTA
rJMFF003C07+ GTGGATTTGCAAGACTA
rJMSF013B21+ GTGGATTTGCAAGACTA
____________________________________________________________
consensus TGTCAGAGTAGCCTCAAGGTACTTTAAGGGGCCTGAACTACTCGTGGATTTGCAAGACTA
. : . : . : . : . : . :
rJMSF016K01+ TGATTATTCCTTGGACATGTGGAGTCTTGGCTGCATGTTCGCAGGAATGATCTTTAGGAA
rJMSF053O11+ TGATTATTCCTTGGACATGTGGAGTCTTGGCTGCATGTTCGCAGGAATGATCTTTAGGAA
rJMFF003C07+ TGATTATTCCTTGGACATGTGGAGTCTTGGCTGCATGTTCGCAGGAATGATCTTTAGGAA
rJMSF013B21+ TGATTATTCCTNGGACATGTGGAGTCTNGGCTGCATGTTCGCAGGAATGATCTTTAGGAA
rJMSF029A14+ GGACATGTGGAGTCTNGGCTGCATGTTCGCAGGAATGATCTTTAGGAA
____________________________________________________________
consensus TGATTATTCCTTGGACATGTGGAGTCTTGGCTGCATGTTCGCAGGAATGATCTTTAGGAA
. : . : . : . : . : . :
rJMSF016K01+ AGAGCCATTCTTCTATGGCCATGACAACCATGATCAACTTGTTAAAATTGCAAAGGTTCT
rJMSF053O11+ AGAGCCATTCTTCTATGGCCATGACAACCATGATCAACTTGTTAAAATTGCAAAGGTTCT
rJMFF003C07+ AGAGCCATTCTTCTATGGCCATGACAACCATGATCAACTTGTTAAAATTGCAAAGGTTCT
rJMSF013B21+ AGAGCCATTCTTCTATGGCCATGACAACCATGATCAACTTGTTAAAATTGCAAAGGTTCT
rJMSF023A09+ AGGTTCT
rJMSF029A14+ AGAGCCATTCTTCTATGGCCATGACAACCATGATCAACTTGTTAAAATTGCAAAGGTTCT
rJMSF046L23+ TATGGCCATGACAACCATGATCAACTTGTTAAAATTGCAAAGGTTCT
____________________________________________________________
consensus AGAGCCATTCTTCTATGGCCATGACAACCATGATCAACTTGTTAAAATTGCAAAGGTTCT
. : . : . : . : . : . :
rJMSF016K01+ TGGCACAGACGAGTTAAATGCATATCTCAACAAATATCATCTGGAGCTTGATCCTCAACT
rJMSF053O11+ TGGCACAGACGAGTTAAATGCATATCTCAACAAATATCATCTGGAGCTTGATCCTCAACT
rJMFF003C07+ TGGCACAGACGAGTTAAATGCATATCTCAACAAATATCATCTGGAGCTTGATCCTCAACT
rJMSF013B21+ TGGCACAGACGAGTTAAATGCATATCTCAACAAATATCATCTGGAGCTTGATCCTCAACT
rJMSF023A09+ TGGCACAGACGAGTTAAATGCATATCTCAACAAATATCATCTGGAGCTTGATCCTCAACT
rJMSF029A14+ TGGCACAGACGAGTTAAATGCATATCTCAACAAATATCATCTGGAGCTTGATCCTCAACT
rJMSF046L23+ TGGCACAGACGAGTTAAATGCATATCTCAACAAATATCATCTGGAGCTTGATCCTCAACT
____________________________________________________________
consensus TGGCACAGACGAGTTAAATGCATATCTCAACAAATATCATCTGGAGCTTGATCCTCAACT
. : . : . : . : . : . :
rJMSF016K01+ TGATGCTCTGGTTGGAAGGCACAGCAGGAAACCTTGGTCCCGATTTATTAATTCAGACAA
rJMSF053O11+ TGATGCTCTGGTTGGAAGGCACAGCAGGAAACCTTGGTCCCGATTTATTAATTCAGACAA
rJMFF003C07+ TGATGCTCTGGTTGGAAGGCACAGCAGGAAACCTTGGTCCCGATTTATTAATTCAGACAA
rJMSF013B21+ TGATGCTCTGGTTGGAAGGCACAGCAGGAAACCTTGGTCCCGATTTATTAATTCAGACAA
rJMSF023A09+ TGATGCTCTGGTTGGAAGGCACAGCAGGAAACCTTGGTCCCGATTTATTAATTCAGACAA
rJMSF029A14+ TGATGCTCTGGTTGGAAGGCACAGCAGGAAACCTTGGTCCCGATTTATTAATTCAGACAA
rJMSF046L23+ TGATGCTCTGGTTGGAAGGCACAGCAGGAAACCTTGGTCCCGATTTATTAATTCAGACAA
____________________________________________________________
consensus TGATGCTCTGGTTGGAAGGCACAGCAGGAAACCTTGGTCCCGATTTATTAATTCAGACAA
. : . : . : . : . : . :
rJMSF016K01+ CCAGCATTTAGTTTCTCCAGAGGCAATTGATTTCCTTGATAAGCTCCTTCGTTATGATCA
rJMSF053O11+ CCAGCATTTAGTTTCTCCAGAGGCAATTGATTTCCTTGATAAGCTCCTTCGTTATGATCA
rJMFF003C07+ CCAGCATTTAGTTTCTCCAGAGGCAATTGATTTCCTTGATAAGCTCCTTCGTTATGATCA
rJMSF013B21+ CCAGCATTTAGTTTCTCCAGAGGCAATTGATTTCCTTGATAAGCTCCTTCGTTATGATCA
rJMSF023A09+ CCAGCATTTAGTTTCTCCAGAGGCAATTGATTTCCTTGATAAGCTCCTTCGTTATGATCA
rJMSF029A14+ CCAGCATTTAGTTTCTCCAGAGGCAATTGATTTCCTTGATAAGCTCCTTCGTTATGATCA
rJMSF046L23+ CCAGCATTTAGTTTCTCCAGAGGCAATTGATTTCCTTGATAAGCTCCTTCGTTATGATCA
____________________________________________________________
consensus CCAGCATTTAGTTTCTCCAGAGGCAATTGATTTCCTTGATAAGCTCCTTCGTTATGATCA
. : . : . : . : . : . :
rJMSF016K01+ TCAAGACAGACTTACAGCTAAAGAAGCTATGGCACATCCATACTTCTTCCAAGTGAGGGC
rJMSF053O11+ TCAAGACAGACTTACAGCTAAAGAAGCTATGGCACATCCATACTTCTTCCAAGTGAGGGC
rJMFF003C07+ TCAAGACAGACTTACAGCTAAAGAAGCTATGGCACATCCATACTTCTTCCAAGTGAGGGC
rJMSF013B21+ TCAAGACAGACTTACAGCTAAAGAAGCTATGGCACATCCATACTTCTTCCAAGTGAGGGC
rJMSF023A09+ TCAAGACAGACTTACAGCTAAAGAAGCTATGGCACATCCATACTTCTTCCAAGTGAGGGC
rJMSF029A14+ TCAAGACAGACTTACAGCTAAAGAAGCTATGGCACATCCATACTTCTTCCAAGTGAGGGC
rJMSF046L23+ TCAAGACAGACTTACAGCTAAAGAAGCTATGGCACATCCATACTTCTTCCAAGTGAGGGC
____________________________________________________________
consensus TCAAGACAGACTTACAGCTAAAGAAGCTATGGCACATCCATACTTCTTCCAAGTGAGGGC
. : . : . : . : . : . :
rJMSF016K01+ AGCTGAAAACAGCAGGGTGCGTACACAGTAGCGATGGCCCCCTCTATATACATCATGATT
rJMSF053O11+ AGCTGAAAACAGCAGGGTGCGTACACAGTAGCGATGGCCCCCTCTATATACATCATGATT
rJMFF003C07+ AGCTGAAAACAGCAGGGTGCGTACACAGTAGCGATGGCCCCCTCTATATACATCATGATT
rJMSF013B21+ AGCTGAAAACAGCAGGGTGCGTACACAGTAGCGATGGCCCCCTCTATATACATCATGATT
rJMSF023A09+ AGCTGAAAACAGCAGGGTGCGTACACAGTAGCGATGGCCCCCTCTATATACATCATGATT
rJMSF029A14+ AGCTGAAAACAGCAGGGTGCGTACACAGTAGCGATGGCCCCCTCTATATACATCATGATT
rJMSF046L23+ AGCTGAAAACAGCAGGGTGCGTACACAGTAGCGATGGCCCCCTCTATATACATCATGATT
____________________________________________________________
consensus AGCTGAAAACAGCAGGGTGCGTACACAGTAGCGATGGCCCCCTCTATATACATCATGATT
. : . : . : . : . : . :
rJMSF016K01+ ATTTGTAATGGAGTTGCAAAGCGCGTGTGTACATTGCTGTCAAAATGTCTTGATCACACA
rJMSF053O11+ ATTTGTAATGGAGTTGCAAAGCGCGTGTGTACATTGCTGTCAAAATGTCTTGATCACACA
rJMFF003C07+ ATTTGTAATGGAGTTGCAAAGCGCGTGTGTACATTGCTGTCAAAATGTCTTGATCACACA
rJMSF013B21+ ATTTGTAATGGAGTTGCAAAGCGCGTGTGTACATTGCTGTCAAAATGTCTTGATCACACA
rJMSF023A09+ ATTTGTAATGGAGTTGCAAAGCGCGTGTGTACATTGCTGTCAAAATGTCTTGATCACACA
rJMSF029A14+ ATTTGTAATGGAGTTGCAAAGCGCGTGTGTACATTGCTGTCAAAATGTCTTGATCACACA
rJMSF046L23+ ATTTGTAATGGAGTTGCAAAGCGCGTGTGTACATTGCTGTCAAAATGTCTTGATCACACA
____________________________________________________________
consensus ATTTGTAATGGAGTTGCAAAGCGCGTGTGTACATTGCTGTCAAAATGTCTTGATCACACA
. : . : . : . : . : . :
rJMSF016K01+ CT
rJMSF053O11+ CTTGGAACGACTTTTATGTAGTGATGAAAGTGCATGGCTCATTTATTTCCCCCACTTGAG
rJMFF003C07+ CTTGGAACGACTTTTATGTAGTGATGAAAGTGCATGGCTCATTTATTTCCCCCACTTGAG
rJMSF013B21+ CTTGGAACGACTTTTATGTAGTGATGAAAGTGCATGGCTCATTTATTTCCCCCACTTGAG
rJMSF023A09+ CTTGGAACGACTTTTATGTAGTGATGAAAGTGCATGGCTCATTTATTTCCCCCACTTGAG
rJMSF029A14+ CTTGGAACGACTTTTATGTAGTGATGAAAGTGCATGGCTCATTTATTTCCCCCACTTGAG
rJMSF046L23+ CTTGGAACGACTTTTATGTAGTGATGAAAGTGCATGGCTCATTTATTTCCCCCACTTGAG
____________________________________________________________
consensus CTTGGAACGACTTTTATGTAGTGATGAAAGTGCATGGCTCATTTATTTCCCCCACTTGAG
. : . : . : . : . : . :
rJMSF053O11+ CAGATTGATGAAGCTAACTTTAATTTTTACGTTAGCATTCTTCAACTCCCATATCCATTT
rJMFF003C07+ CAGATTGATGAAGCTAACTTTAATTTTTACGTTAGCATTCTTCAACTCCCATATCCATTT
rJMSF013B21+ CAGATTGATGAAGCTAACTTTAATTTTTACGTTAGCATTCTTCAACTCCCATATCCATTT
rJMSF023A09+ CAGATTGATGAAGCTAACTTTAATTTTTACGTTAGCATTCTTCAACTCCCATATCCATTT
rJMSF029A14+ CAGATTGATGAAGCTAACTTTAATTTTTACGTTAGCATTCTTCAACTCCCATATCCATTT
rJMSF046L23+ CAGATTGATGAAGCTAACTTTAATTTTTACGTTAGCATTCTTCAACTCCCATATCCATTT
____________________________________________________________
consensus CAGATTGATGAAGCTAACTTTAATTTTTACGTTAGCATTCTTCAACTCCCATATCCATTT
. : . : . : . : . : . :
rJMSF053O11+ GTGGGCTGTATATTCTATCGTAAATGTTGTGAA-CTGTGAATGTCATGTC
rJMFF003C07+ GTGGGCTGTATATTCTATCGTAAATGTTGTGAA-CTGTGAATGTCATGTCAGCTCGCATG
rJMSF013B21+ GTGGGCTGTATATTCTATCGTAAATGTTGTGAA-CTGTGAATGTCATGTCAGCTCGCATG
rJMSF023A09+ GTGGGCTGTATATTCTATCGTAAATGTTGTGAACCTGTGAATGTCANGTCAGCTCGCATG
rJMSF029A14+ GTGGGCTGTATATTCTATCGTAAATGTTGTGAA-CTGTGAATGTCATGTCAGCTCGCATG
rJMSF046L23+ GTGGGCTGTATATTCTATCGTAAATGTTGTGAA-CTGTGAATGTCATGTCAGCTCGCATG
____________________________________________________________
consensus GTGGGCTGTATATTCTATCGTAAATGTTGTGAA-CTGTGAATGTCATGTCAGCTCGCATG
. : . : . : . : . : . :
rJMFF003C07+ GCCTTTTCAGTACTACTACACA
rJMSF013B21+ GCCTTTTCAGTACTACTACACATAAAAT--CTTGTTGGCATCTCATCAGTGTACTTGTTT
rJMSF023A09+ GCCTNTTCAGTACTACTACACATAAAAT
rJMSF029A14+ GCCTTTTCAGTACTACTACACATAAAATAGCTTGTTGGCATCTCATCAGTGTACTTGTTT
rJMSF046L23+ GCCTTTTCAGTACTACTACACATAAAATAGCTTGTTGGCATCTCATCAGTGTACTTGTTT
____________________________________________________________
consensus GCCTTTTCAGTACTACTACACATAAAATAGCTTGTTGGCATCTCATCAGTGTACTTGTTT
. : . : . : . : . : . :
rJMSF013B21+ GGGAATGCCT
rJMSF029A14+ GGGAATGCCTTGTTTACATTCAAGCTGCATGCCATT
rJMSF046L23+ GGGAATGCCTTGTTTACATTCAAGCTGCATGCCATTTGTTTCAGTGTGTAACATCGTACT
____________________________________________________________
consensus GGGAATGCCTTGTTTACATTCAAGCTGCATGCCATTTGTTTCAGTGTGTAACATCGTACT