Contig 008645:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS107C12Sequence626008645 (2)gb|KDO61746.1|2e-71hypothetical protein CISIN_1g006206mg [Citrus sinensis]
JMSF046F02Sequence716010166 (14)ref|XP_009621780.1|3e-105PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140700008645 (2)ref|XP_011039729.1|3e-36PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140

Alignment

This contig is upended


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JMFS107C12-                                 GAGAGAGAACTAGTCGCAGCATCGTTCTACGTGGGCTC
                      ____________________________________________________________
consensus                                   GAGAGAGAACTAGTCGCAGCATCGTTCTACGTGGGCTC
 
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JMFS107C12-           GAACGATCGTTGGGGGGTGAGCAGTTCTGGAACATTCATTCACAACCCAAACGGACCGAA
                      ____________________________________________________________
consensus             GAACGATCGTTGGGGGGTGAGCAGTTCTGGAACATTCATTCACAACCCAAACGGACCGAA
 
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JMFS107C12-           GTTTACAGCTCAGACGGATTCTCAGATCACAAGCACTCTCGACTCTGAGCTCTACAAAAC
                      ____________________________________________________________
consensus             GTTTACAGCTCAGACGGATTCTCAGATCACAAGCACTCTCGACTCTGAGCTCTACAAAAC
 
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JMFS107C12-           AGCCAGGGTATCTCCGAGCTCATTGAGGTATTATGGTCTCGGGTTAAAGAAAGGCATATA
                      ____________________________________________________________
consensus             AGCCAGGGTATCTCCGAGCTCATTGAGGTATTATGGTCTCGGGTTAAAGAAAGGCATATA
 
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JMFS107C12-           TAGTGTTGAGCTTCATTTTGCTGAGATACAAATGGACGATTCTCGGGACTCTTGGAAAGG
                      ____________________________________________________________
consensus             TAGTGTTGAGCTTCATTTTGCTGAGATACAAATGGACGATTCTCGGGACTCTTGGAAAGG
 
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JMFS107C12-           CCTTGGGAAGCGCATTTTCGACGTTTACATTCAGGTATGGCAAATTTTGAAGTAGTACAT
                      ____________________________________________________________
consensus             CCTTGGGAAGCGCATTTTCGACGTTTACATTCAGGTATGGCAAATTTTGAAGTAGTACAT
 
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JMFS107C12-           TAGTACCATTACTCCATTAGCTGTTTTGTATATATGATCTACTTTCGTATTATTTGAACT
                      ____________________________________________________________
consensus             TAGTACCATTACTCCATTAGCTGTTTTGTATATATGATCTACTTTCGTATTATTTGAACT
 
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JMFS107C12-           GAAGGGGGAAAGAGTTCTTCGAGATTTCAATGTTAAAGACGAGGCCGGGGGGTCTAAAAA
rJMSF046F02+                 GAAAGAGTTCTTCGAGATTTCAACGTTAAACAAGAGGCCGGGGGATCTAAGCG
                      ____________________________________________________________
consensus             GAAGGGGGAAAGAGTTCTTCGAGATTTCAATGTTAAAGACGAGGCCGGGGGGTCTAAGCG
 
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JMFS107C12-           GGCGTTGGTGAAGACATTCAAGGCGAACGTGACAAACAACGTGTTGGACATTCACTTCTT
rJMSF046F02+          GGCACTAGTGAAGAAGTTCAAGGCGAACGTGACAAACAACGTGTTGGACATTCACTTTTT
                      ____________________________________________________________
consensus             GGCGTTGGTGAAGACGTTCAAGGCGAACGTGACAAACAACGTGTTGGACATTCACTTTTT
 
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JMFS107C12-           CTGGGCCGGGAAGGGCACTTGCTGCATTCC                              
rJMSF046F02+          CTGGGCTGGGAAGGGCACCTGCTGCATTCCAGTCCAAAGCACATTTGGCCCTATAGTTTC
                      ____________________________________________________________
consensus             CTGGGCTGGGAAGGGCACTTGCTGCATTCCAGTCCAAAGCACATTTGGCCCTATAGTTTC
 
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rJMSF046F02+          AGCCATCCATGTTGTTCAAGGTTCTTGAAACCGCGCCTCTTTCGATAAATAGATGCTCGG
                      ____________________________________________________________
consensus             AGCCATCCATGTTGTTCAAGGTTCTTGAAACCGCGCCTCTTTCGATAAATAGATGCTCGG
 
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rJMSF046F02+          ATTCACTATTCACTACCTGAATGTGCGCTTTAACTCAATTTTGCAGAGGTCAATTTAGAT
                      ____________________________________________________________
consensus             ATTCACTATTCACTACCTGAATGTGCGCTTTAACTCAATTTTGCAGAGGTCAATTTAGAT
 
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rJMSF046F02+          GATTCTTCAGACGGTAGTGACAAGAAACGCGTCGGAAAGATTATTGGAATCACGCTTGGA
                      ____________________________________________________________
consensus             GATTCTTCAGACGGTAGTGACAAGAAACGCGTCGGAAAGATTATTGGAATCACGCTTGGA
 
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rJMSF046F02+          TCTGCAGCAGGAGTGCTCATAATTTGTTCCATTTTCTATGTGTGGTGGACAAAGAAAAAA
                      ____________________________________________________________
consensus             TCTGCAGCAGGAGTGCTCATAATTTGTTCCATTTTCTATGTGTGGTGGACAAAGAAAAAA
 
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rJMSF046F02+          TCTCCAACCTACAAGGGATTCTAACTTGATTCAACAACAAAACTTCCTTCTTCTTCCAAA
                      ____________________________________________________________
consensus             TCTCCAACCTACAAGGGATTCTAACTTGATTCAACAACAAAACTTCCTTCTTCTTCCAAA
 
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rJMSF046F02+          TACTGCCTACTGAACCAGTGAGCTAAGCTCGTGTCCGCACCTTCTTCCTAAGCCTATATA
                      ____________________________________________________________
consensus             TACTGCCTACTGAACCAGTGAGCTAAGCTCGTGTCCGCACCTTCTTCCTAAGCCTATATA
 
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rJMSF046F02+          TGTAACCTCTCTCAGATCTTTAATTAATTAGGCCATGAATTGAAAGACCCTTACTCTTCT
                      ____________________________________________________________
consensus             TGTAACCTCTCTCAGATCTTTAATTAATTAGGCCATGAATTGAAAGACCCTTACTCTTCT
 
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rJMSF046F02+          TTCTATCATAATGTATATTAATTGCATATAAATTAGCCCAACTAAGTGTGTAAGCTGTAA
                      ____________________________________________________________
consensus             TTCTATCATAATGTATATTAATTGCATATAAATTAGCCCAACTAAGTGTGTAAGCTGTAA