Contig 008644:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046A20Sequence698008644 (2)ref|XP_009607011.1|258PREDICTED: uncharacterized protein LOC104101267 [Nicotiana tomentosiformis]696008644 (2)ref|XP_006343563.1|256PREDICTED: uncharacterized protein LOC102588858 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF046A20-                                            GGCAGCCGAGACAATGGATCTTGAAGC
                      ____________________________________________________________
consensus                                              GGCAGCCGAGACAATGGATCTTGAAGC
 
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JMSF046A20-           AAAGGCAACACTTTCACAAGCACACCCCGAGACAATGGACTTCCTTTCGCACGCCTGGTG
                      ____________________________________________________________
consensus             AAAGGCAACACTTTCACAAGCACACCCCGAGACAATGGACTTCCTTTCGCACGCCTGGTG
 
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JMSF046A20-           CGACTTTGCGGTTCAAGCCTTCCAGCCCGAAATGCAAGATCTCGCGCTAACTGTCCATGA
                      ____________________________________________________________
consensus             CGACTTTGCGGTTCAAGCCTTCCAGCCCGAAATGCAAGATCTCGCGCTAACTGTCCATGA
 
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JMSF046A20-           TAGCTCAATCAAGAAATTCAGTGATGACAGCAAGAAGCTGCCTTCTTTGCAGAAAATGGA
                      ____________________________________________________________
consensus             TAGCTCAATCAAGAAATTCAGTGATGACAGCAAGAAGCTGCCTTCTTTGCAGAAAATGGA
 
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JMSF046A20-           TAAAAGCATGAAGATGGATGATACAGATAAGTCTATACCTCCATGGACATCCAATGATGT
                      ____________________________________________________________
consensus             TAAAAGCATGAAGATGGATGATACAGATAAGTCTATACCTCCATGGACATCCAATGATGT
 
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JMSF046A20-           GAAGTCATGGATATGGATGCAACAAGCAATGCATCCCGAATTGAATTACCACAGCTATCT
                      ____________________________________________________________
consensus             GAAGTCATGGATATGGATGCAACAAGCAATGCATCCCGAATTGAATTACCACAGCTATCT
 
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JMSF046A20-           TAGAAAGAAATGGATTCCATGGAAGATAGCGCCACTAAAGAATTTCTCAATCAAGAAATG
                      ____________________________________________________________
consensus             TAGAAAGAAATGGATTCCATGGAAGATAGCGCCACTAAAGAATTTCTCAATCAAGAAATG
 
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JMSF046A20-           GCTTAAAGAAATGAAGCAGAAGAGGAAAGAAGAGAACAGATTACAAAAGGCGGAAGTGCA
                      ____________________________________________________________
consensus             GCTTAAAGAAATGAAGCAGAAGAGGAAAGAAGAGAACAGATTACAAAAGGCGGAAGTGCA
 
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JMSF046A20-           CGCAGCCATATCGGTTGCAGGGGTTGCAGCTGCACTAGCAGCCATAGCAGCAGAAAACTC
                      ____________________________________________________________
consensus             CGCAGCCATATCGGTTGCAGGGGTTGCAGCTGCACTAGCAGCCATAGCAGCAGAAAACTC
 
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JMSF046A20-           GAGCCGGGATGACAGTAAGGAGTCAGCTGTGGCATCTGCAGCTGCATTAGTCGCCGCCCA
                      ____________________________________________________________
consensus             GAGCCGGGATGACAGTAAGGAGTCAGCTGTGGCATCTGCAGCTGCATTAGTCGCCGCCCA
 
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JMSF046A20-           GTGTGCTAAAGTGGCGGAAGCCATGGGAGCAAAGAAGGACCAACTCAGCAGCGTAATTGG
rJMSF046A20+                                  GGGAGCAAAGAAGGACCAACTCAGCAGCGTAATTGG
                      ____________________________________________________________
consensus             GTGTGCTAAAGTGGCGGAAGCCATGGGAGCAAAGAAGGACCAACTCAGCAGCGTAATTGG
 
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JMSF046A20-           TTCGGCCATGAGTGGCACGAGCGCGAGCGACATTGTTACACTCACAGCTGCAGCCACAAC
rJMSF046A20+          TTCGGCCATGAGTGGCACGAGCGCGAGCGACATTGTTACACTCACAGCTGCAGCCACAAC
                      ____________________________________________________________
consensus             TTCGGCCATGAGTGGCACGAGCGCGAGCGACATTGTTACACTCACAGCTGCAGCCACAAC
 
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JMSF046A20-           ATCACTAAGAG                                                 
rJMSF046A20+          ATCACTAAGAGGAGCAGCAACACTTAAAGCGAGAAGAGAGTGTAAGGGTATACTAAATGG
                      ____________________________________________________________
consensus             ATCACTAAGAGGAGCAGCAACACTTAAAGCGAGAAGAGAGTGTAAGGGTATACTAAATGG
 
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rJMSF046A20+          AAGTACACCAGTTCTCCCCATAGAAGATGGCAAGGATTTCGAGATCGAGTATGAATCATG
                      ____________________________________________________________
consensus             AAGTACACCAGTTCTCCCCATAGAAGATGGCAAGGATTTCGAGATCGAGTATGAATCATG
 
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rJMSF046A20+          TAGATCAGTGCTTTCAAAGGGNGCAGAGCTCAACCTTGAAACATCAGATGGGAGATACAT
                      ____________________________________________________________
consensus             TAGATCAGTGCTTTCAAAGGGNGCAGAGCTCAACCTTGAAACATCAGATGGGAGATACAT
 
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rJMSF046A20+          GCTAAGGTCAGTGTCCATCATCTTTAACCCTGAAGCCAAGGTTATTCTCAGGACAAGGAA
                      ____________________________________________________________
consensus             GCTAAGGTCAGTGTCCATCATCTTTAACCCTGAAGCCAAGGTTATTCTCAGGACAAGGAA
 
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rJMSF046A20+          GCTTAATATATTGAATTCATTCCCNGGACNCAAAGAAAGTATCATAGTAGATCTGCNCGC
                      ____________________________________________________________
consensus             GCTTAATATATTGAATTCATTCCCNGGACNCAAAGAAAGTATCATAGTAGATCTGCNCGC
 
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rJMSF046A20+          AGAGTTGTACAAGGATTGTGAAGGNGAGGAAATGGATAGTTGCTATCTAATTGTATTAAC
                      ____________________________________________________________
consensus             AGAGTTGTACAAGGATTGTGAAGGNGAGGAAATGGATAGTTGCTATCTAATTGTATTAAC
 
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rJMSF046A20+          TACAAACAAGGGAATAATGAAGATAGACNTGATGGATGATTATGAACGTTATAGAATGTG
                      ____________________________________________________________
consensus             TACAAACAAGGGAATAATGAAGATAGACNTGATGGATGATTATGAACGTTATAGAATGTG
 
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rJMSF046A20+          GTCAAAGACTNTTAAACNCATGTTGACNCTTTCTACTTCATTGACAACATATATGAGCTC
                      ____________________________________________________________
consensus             GTCAAAGACTNTTAAACNCATGTTGACNCTTTCTACTTCATTGACAACATATATGAGCTC
 
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rJMSF046A20+          CAATTTTACAAAAGTTGAATTGAAGTCTACCNTTGTTGAGTGATGAGAATATTTGTATTC
                      ____________________________________________________________
consensus             CAATTTTACAAAAGTTGAATTGAAGTCTACCNTTGTTGAGTGATGAGAATATTTGTATTC
 
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rJMSF046A20+          TGTGTTTTTTTTTTTAATAAATTTATAGCAAATATTTATATCGAGTTACAACCAATATTT
                      ____________________________________________________________
consensus             TGTGTTTTTTTTTTTAATAAATTTATAGCAAATATTTATATCGAGTTACAACCAATATTT