Contig 008642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044E04Sequence643005277 (3)ref|XP_009776163.1|8e-62PREDICTED: uncharacterized protein LOC104225980 isoform X4 [Nicotiana sylvestri506008642 (3)ref|XP_009776163.1|2e-22PREDICTED: uncharacterized protein LOC104225980 isoform X4 [Nicotiana sylvestri
JMSF024M01Sequence684005277 (3)ref|XP_009776162.1|2e-81PREDICTED: uncharacterized protein LOC104225980 isoform X3 [Nicotiana sylvestri691008642 (3)ref|XP_010324617.1|1e-40PREDICTED: uncharacterized protein LOC101247143 isoform X1 [Solanum lycopersicu
JMSF045O11Sequence719005277 (3)ref|XP_009776162.1|3e-82PREDICTED: uncharacterized protein LOC104225980 isoform X3 [Nicotiana sylvestri545008642 (3)ref|XP_009776163.1|1e-22PREDICTED: uncharacterized protein LOC104225980 isoform X4 [Nicotiana sylvestri

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+                                                           TCATATAGAGC
                      ____________________________________________________________
consensus                                                              TCATATAGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          CTTCAGTTCATTCAAGAGATGAACATTGTAATATGCCTCTGATGCATATGGCTCCAATGA
                      ____________________________________________________________
consensus             CTTCAGTTCATTCAAGAGATGAACATTGTAATATGCCTCTGATGCATATGGCTCCAATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          TGTATCCTGGTTTACTTTACCAGCATCAAATTGATGCAAGTAGATTCCATGCTGATTGCC
                      ____________________________________________________________
consensus             TGTATCCTGGTTTACTTTACCAGCATCAAATTGATGCAAGTAGATTCCATGCTGATTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          ATGGTGCAGATGGTATGTTTCTACCTGAGGACTTGTGTATTGCTTCTGGAGCCTCAAAAT
rJMFF044E04+                                                                CAAAAT
rJMSF045O11+                                                                CAAAAT
                      ____________________________________________________________
consensus             ATGGTGCAGATGGTATGTTTCTACCTGAGGACTTGTGTATTGCTTCTGGAGCCTCAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          GGAAGCAGTCTGGATATTCTCAGGGAAGCAGAAGCGTCACAAATATTCATGAGGGCCCAA
rJMFF044E04+          GGAAGCAGTCTGGATATTCTCAGGGAAGCAGAAGCGTCACAAATATTCATGAGGGCCCAA
rJMSF045O11+          GGAAGCAGTCTGGATATTCTCAGGGAAGCAGAAGCGTCACAAATATTCATGAGGGCCCAA
                      ____________________________________________________________
consensus             GGAAGCAGTCTGGATATTCTCAGGGAAGCAGAAGCGTCACAAATATTCATGAGGGCCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          ATCTTTCTTCTCGATTTGATGTTTTGGGCTTCTCAGGTGAAAGTCCTCATGCTAGTACTC
rJMFF044E04+          ATCTTTCTTCTCGATTTGATGTTTTGGGCTTCTCAGGTGAAAGTCCTCATGCTAGTACTC
rJMSF045O11+          ATCTTTCTTCTCGATTTGATGTTTTGGGCTTCTCAGGTGAAAGTCCTCATGCTAGTACTC
                      ____________________________________________________________
consensus             ATCTTTCTTCTCGATTTGATGTTTTGGGCTTCTCAGGTGAAAGTCCTCATGCTAGTACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          TCACTGATGAAGATATCCTAGACATGACATATGAAGAGTACCTTGAAGCTCATAGCAGAG
rJMFF044E04+          TCACTGATGAAGATATCCTAGACATGACATATGAAGAGTACCTTGAAGCTCATAGCAGAG
rJMSF045O11+          TCACTGATGAAGATATCCTAGACATGACATATGAAGAGTACCTTGAAGCTCATAGCAGAG
                      ____________________________________________________________
consensus             TCACTGATGAAGATATCCTAGACATGACATATGAAGAGTACCTTGAAGCTCATAGCAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          GGAACAAAAGAGTACGCAATCATGTCTCAGGACCATCAGGGAGTACACAGCAGTCATCTA
rJMFF044E04+          GGAACAAAAGA------------GTCTCAGGACCATCAGGGAGTACACAGCAGTCATCTA
rJMSF045O11+          GGAACAAAAGAGTACGCAATCATGTCTCAGGACCATCAGGGAGTACACAGCAGTCATCTA
                      ____________________________________________________________
consensus             GGAACAAAAGAGTACGCAATCATGTCTCAGGACCATCAGGGAGTACACAGCAGTCATCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          TCAGCAAAGAAAATTGTGAAGAGTCGCAGTCGGGCTGTAGTTCTAAGAAAAGGAGTTGCG
rJMFF044E04+          TCAGCAAAGAAAATTGTGAAGAGTCGCAGTCGGGCTGTAGTTCTAAGAAAAGGAGTTGCG
rJMSF045O11+          TCAGCAAAGAAAATTGTGAAGAGTCGCAGTCGGGCTGTAGTTCTAAGAAAAGGAGTTGCG
                      ____________________________________________________________
consensus             TCAGCAAAGAAAATTGTGAAGAGTCGCAGTCGGGCTGTAGTTCTAAGAAAAGGAGTTGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          AACGCAAGTCTGAGTGATGATTGTATGCACCTTCGCAGGCAAGCAGGCAATGGTTTGCCC
rJMFF044E04+          AACGCAAGTCTGAGTGATGATTGTATGCACCTTCGCAGGCAAGCAGGCAATGGTTTGCCC
rJMSF045O11+          AACGCAAGTCTGAGTGATGATTGTATGCACCTTCGCAGGCAAGCAGGCAATGGTTTGCCC
                      ____________________________________________________________
consensus             AACGCAAGTCTGAGTGATGATTGTATGCACCTTCGCAGGCAAGCAGGCAATGGTTTGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          TTGAATTTGGTGGCTTAGTATTTAGCTGCAAAGCAGCCTTAAATTCGAACCTATTCTTTT
rJMFF044E04+          TTGAATTTGGTGGCTTAGTATTTAGCTGCAAAGCAGCCTTAAATTCGAACCTATTCTTTT
rJMSF045O11+          TTGAATTTGGTGGCTTAGTATTTAGCTGCAAAGCAGCCTTAAATTCGAACCTATTC-TTT
                      ____________________________________________________________
consensus             TTGAATTTGGTGGCTTAGTATTTAGCTGCAAAGCAGCCTTAAATTCGAACCTATTCTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          TTTATTTTGTAAACCTCAAAATTAGGGGTGAATATATGGCACTGTTGTATTATATTGTAC
rJMFF044E04+          TTTATTTTGTAAACCTCAAAATTAGGGGTGAATATATGGCACTGTTGTATTATATTGTAC
rJMSF045O11+          TTTATTTTGTAAACCTCAAAATTAGGGGTGAATATATGGCACTGTTGTATTATATTGTAC
                      ____________________________________________________________
consensus             TTTATTTTGTAAACCTCAAAATTAGGGGTGAATATATGGCACTGTTGTATTATATTGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024M01+          TGTATTGTTGTCAAATTCTT                                        
rJMFF044E04+          TGTATTGTTGTCAAATTCTT                                        
rJMSF045O11+          TGTATTGTTGTCAAATTCTTACACCTTGTTGAAATATATTTCAATGGGTGGTTGAATATT
                      ____________________________________________________________
consensus             TGTATTGTTGTCAAATTCTTACACCTTGTTGAAATATATTTCAATGGGTGGTTGAATATT