| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF012O22 | Sequence | 348 | 009249 (3) | 768 | 008637 (3) | ref|XP_008224858.1| | 2e-106 | PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Prunus mume] | |||
| JMSF044N23 | Sequence | 684 | 009249 (3) | ref|XP_006590217.1| | 1e-20 | PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] | 704 | 008637 (3) | ref|XP_008224858.1| | 3e-92 | PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Prunus mume] |
| JMSF051E02 | Sequence | 651 | 009249 (3) | ref|XP_006590217.1| | 2e-14 | PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] | 742 | 008637 (3) | ref|XP_008224858.1| | 7e-99 | PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Prunus mume] |
This contig is upended
. : . : . : . : . : . :
rJMSF012O22+ TNG
____________________________________________________________
consensus TNG
. : . : . : . : . : . :
rJMSF012O22+ AAGCCTTGACTACTTTTTATTTGATTCTGAGAGACAACATGTATTGGAGTGGTCCAAACG
rJMSF051E02+ GAGACAACATGTATTGGAGTGGTCAAANCG
____________________________________________________________
consensus AAGCCTTGACTACTTTTTATTTGATTCTGAGAGACAACATGTATTGGAGTGGTCCAAACG
. : . : . : . : . : . :
rJMSF012O22+ CTACAAAATTATAAGAGGAATAGCACGGGGACTACTTTACCTTCATGAAGATTCTCGTCT
rJMSF051E02+ CTACAAAATTATAAGAGGAATAGCACGGGGACTACTTTACCTTCATGAAGATTCTCGTCT
rJMSF044N23+ GGAATAGCACGGGGACTACTTTACCTTCATGAAGATTCTCGTCT
____________________________________________________________
consensus CTACAAAATTATAAGAGGAATAGCACGGGGACTACTTTACCTTCATGAAGATTCTCGTCT
. : . : . : . : . : . :
rJMSF012O22+ TAGAATCATACATCGTGATCTGAAAACAAGCAATATACTATTGGATGTAAATATGGATCC
rJMSF051E02+ TAGAATCATACATCGTGATCTGAAAACAAGCAATATACTATTGGATGTAAATATGGATCC
rJMSF044N23+ TAGAATCATACATCGTGATCTGAAAACAAGCAATATACTATTGGATGTAAATATGGATCC
____________________________________________________________
consensus TAGAATCATACATCGTGATCTGAAAACAAGCAATATACTATTGGATGTAAATATGGATCC
. : . : . : . : . : . :
rJMSF012O22+ AAAAATAGCTGATTTTGGAATGGCAAAAATATTTGGTATTGATCAAACTCAAGGAAATAC
rJMSF051E02+ AAAAATAGCTGATTTTGGAATGGCAAAAATATTTGGTATTGATCAAACTCAAGGAAATAC
rJMSF044N23+ AAAAATAGCTGATTTTGGAATGGCAAAAATATTTGGTATTGATCAAACTCAAGGAAATAC
____________________________________________________________
consensus AAAAATAGCTGATTTTGGAATGGCAAAAATATTTGGTATTGATCAAACTCAAGGAAATAC
. : . : . : . : . : . :
rJMSF012O22+ AAGCAGAATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGCAATGCAAGGAGAGTT
rJMSF051E02+ AAGCAGAATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGCAATGCAAGGAGAGTT
rJMSF044N23+ AAGCAGAATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGCAATGCAAGGAGAGTT
____________________________________________________________
consensus AAGCAGAATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGCAATGCAAGGAGAGTT
. : . : . : . : . : . :
rJMSF012O22+ CTCTGTGAAGTCAGACGTTTTCAGTTTCGGTGTTATGCTTTTAGAGATTATTTCTGGAAA
rJMSF051E02+ CTCTGTGAAGTCAGACGTTTTCAGTTTCGGTGTTATGCTTTTAGAGATTATTTCTGGAAA
rJMSF044N23+ CTCTGTGAAGTCAGACGTTTTCAGTTTCGGTGTTATGCTTTTAGAGATTATTTCTGGAAA
____________________________________________________________
consensus CTCTGTGAAGTCAGACGTTTTCAGTTTCGGTGTTATGCTTTTAGAGATTATTTCTGGAAA
. : . : . : . : . : . :
rJMSF012O22+ GAAAAATCGTAACACTTACCAAACCACAAATAGAGCACAAGACCTTCTTAGCTATGCATG
rJMSF051E02+ GAAAAATCGTAACACTTACCAAACCACAAATAGAGCACAAGACCTTCTTAGCTATGCATG
rJMSF044N23+ GAAAAATCGTAACACTTACCAAACCACAAATAGAGCACAAGACCTTCTTAGCTATGCATG
____________________________________________________________
consensus GAAAAATCGTAACACTTACCAAACCACAAATAGAGCACAAGACCTTCTTAGCTATGCATG
. : . : . : . : . : . :
rJMSF012O22+ GGAACAATGGAGGGATGGAACACCAATAGAAATACTAGATCCAGTTCTCGCAAAGTCGTC
rJMSF051E02+ GGAACAATGGAGGGATGGAACACCAATAGAAATACTAGATCCAGTTCTCGCAAAGTCGTC
rJMSF044N23+ GGAACAATGGAGGGATGGAACACCAATAGAAATACTAGATCCAGTTCTCGCAAAGTCGTC
____________________________________________________________
consensus GGAACAATGGAGGGATGGAACACCAATAGAAATACTAGATCCAGTTCTCGCAAAGTCGTC
. : . : . : . : . : . :
rJMSF012O22+ TTATACTGTAAATGAAGTCATCCAATGTGTGCACATTGGTCTGTTATGTGTTCAAGAAGA
rJMSF051E02+ TTATACTGTAAATGAAGTCATCCAATGTGTGCACATTGGTCTGTTATGTGTTCAAGAAGA
rJMSF044N23+ TTATACTGTAAATGAAGTCATCCAATGTGTGCACATTGGTCTGTTATGTGTTCAAGAAGA
____________________________________________________________
consensus TTATACTGTAAATGAAGTCATCCAATGTGTGCACATTGGTCTGTTATGTGTTCAAGAAGA
. : . : . : . : . : . :
rJMSF012O22+ TGCAGATGAAAGACCTACAATGGAAGATGTGGTATTGATGCTTAGTAGTTATTCTACTAA
rJMSF051E02+ TGCAGATGAAAGACCTACAATGGAAGATGTGGTATTGATGCTTAGTAGTTATTCTACTAA
rJMSF044N23+ TGCAGATGAAAGACCTACAATGGAAGATGTGGTATTGATGCTTAGTAGTTATTCTACTAA
____________________________________________________________
consensus TGCAGATGAAAGACCTACAATGGAAGATGTGGTATTGATGCTTAGTAGTTATTCTACTAA
. : . : . : . : . : . :
rJMSF012O22+ TAACTGGTCAACACCTCGTGAACCTGCATTTTATCGT
rJMSF051E02+ TAACTGGTCAACACCTCGTGAACCTGCATTTTATCGT
rJMSF044N23+ TAACTGGTCAACACCTCGTGAACCTGCATTTTATCGTAATGGAAGTGGGAAGGTGCCGAT
____________________________________________________________
consensus TAACTGGTCAACACCTCGTGAACCTGCATTTTATCGTAATGGAAGTGGGAAGGTGCCGAT
. : . : . : . : . : . :
rJMSF044N23+ GAGAGAAATATCGTTGGAACTGTCTGTGACGGTGAGTGATGAAGCGTCAACAATTGGTAA
____________________________________________________________
consensus GAGAGAAATATCGTTGGAACTGTCTGTGACGGTGAGTGATGAAGCGTCAACAATTGGTAA
. : . : . : . : . : . :
rJMSF044N23+ ACTTTGTCCAAGATAAGGTGGGAAATTTATTTTGTCAAAGGATTATGGCATCATAAGGAT
____________________________________________________________
consensus ACTTTGTCCAAGATAAGGTGGGAAATTTATTTTGTCAAAGGATTATGGCATCATAAGGAT