Contig 008636:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028A01Sequence671016799emb|CBI34431.3|1e-130unnamed protein product [Vitis vinifera]708008636 (2)gb|KDO76413.1|7e-104hypothetical protein CISIN_1g007950mg [Citrus sinensis]
JMSF044M22Sequence367000535 (2)ref|XP_010658715.1|1e-06PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis vinifera]734008636 (2)gb|KDO76413.1|2e-103hypothetical protein CISIN_1g007950mg [Citrus sinensis]

Alignment

This contig is upended


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rJMSF028A01+                                              TCAAGGCTTCATATCGGCAGCGCT
rJMSF044M22+                                                        ATATCGGCAGCGCT
                      ____________________________________________________________
consensus                                                 TCAAGGCTTCATATCGGCAGCGCT
 
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rJMSF028A01+          CGATGGCTGTTGACGAGGCTAATGTTATGTATCATCGCTTTTTGGAGCGGGCATACAAGT
rJMSF044M22+          CGATGGCTGNTGACGAGGCTAATGTTATGTATCATCGCTTTTTGGAGCGGGCATACAAGT
                      ____________________________________________________________
consensus             CGATGGCTGTTGACGAGGCTAATGTTATGTATCATCGCTTTTTGGAGCGGGCATACAAGT
 
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rJMSF028A01+          ACAGGCCAGTTAAAGTTCTCGAGTTTGAATCGCCCCGTCAGCAGTGCATCGTTTACCTAG
rJMSF044M22+          ACAGGCCAGTTAAAGTTCTCGAGTTTGAATCGCCCCGTCAGCAGTGCATCGTTTACCTAG
                      ____________________________________________________________
consensus             ACAGGCCAGTTAAAGTTCTCGAGTTTGAATCGCCCCGTCAGCAGTGCATCGTTTACCTAG
 
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rJMSF028A01+          ATTTAAAACGAGAGGAATGCTCGAATCTCTTTCCTGCTGGTAGAGTGTATTCACAGGCTT
rJMSF044M22+          ATTTAAAACGAGAGGAATGCTCGAATCTCTTTCCTGCTGGTAGAGTGTATTCACAGGCTT
                      ____________________________________________________________
consensus             ATTTAAAACGAGAGGAATGCTCGAATCTCTTTCCTGCTGGTAGAGTGTATTCACAGGCTT
 
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rJMSF028A01+          TTCATTTAGGCGGACAGGGCTTCTTCCTCTCGGCCCACTGCAACATGGATCAACAAAACT
rJMSF044M22+          TTCATTTAGGCGGACAGGGCTTCTTCCTCTCGGCCCACTGCAACATGGATCAACAAAACT
                      ____________________________________________________________
consensus             TTCATTTAGGCGGACAGGGCTTCTTCCTCTCGGCCCACTGCAACATGGATCAACAAAACT
 
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rJMSF028A01+          CGTTCCACTGCTTCGGGCTCTTCTTAGGCATGCAAGAGAAAGGATCGGTTTCATTTGCGG
rJMSF044M22+          CGTTCCACTGCTTCGGGCTCTTCTTAGGCATGCAAGAGAAAGGATCGGTTTCATTTGCGG
                      ____________________________________________________________
consensus             CGTTCCACTGCTTCGGGCTCTTCTTAGGCATGCAAGAGAAAGGATCGGTTTCATTTGCGG
 
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rJMSF028A01+          TCGAGTATGAATTCGCAGCAAGGACGAAGCCAGGGGAGGAGTACGTCGGCAAGTATAAAG
rJMSF044M22+          TCGAGTATGAATTCGCAGCAAGGACGAAGCCAGGGGAGGAGTACGTCGGCAAGTATAAAG
                      ____________________________________________________________
consensus             TCGAGTATGAATTCGCAGCAAGGACGAAGCCAGGGGAGGAGTACGTCGGCAAGTATAAAG
 
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rJMSF028A01+          GCAACTACAAATTCACCGGTGGGAAGGCCGTTGGGTACAGGAACCTGTTTAGTATACCTT
rJMSF044M22+          GCAACTACAAATTCACCGGTGGGAAGGCCGTTGGGTACAGGAACCTGTTTAGTATACCTT
                      ____________________________________________________________
consensus             GCAACTACAAATTCACCGGTGGGAAGGCCGTTGGGTACAGGAACCTGTTTAGTATACCTT
 
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rJMSF028A01+          GGCCCGCATTTATAGCCGACGATAGCATTTACTTCATCAATGGAGTTCTCCACCTTCGAG
rJMSF044M22+          GGCCCGCATTTATAGCCGACGATAGCATTTACTTCATCAATGGAGTTCTCCACCTTCGAG
                      ____________________________________________________________
consensus             GGCCCGCATTTATAGCCGACGATAGCATTTACTTCATCAATGGAGTTCTCCACCTTCGAG
 
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rJMSF028A01+          CTGAGCTAACTATCCGGCCCAACGATCTACTCGGAGACTAACAAAATGAATCGTCTGACT
rJMSF044M22+          CTGAGCTAACTATCCGGCCCAACGATCTACTCGGAGACTAACAAAATGAATCGTCTGACT
                      ____________________________________________________________
consensus             CTGAGCTAACTATCCGGCCCAACGATCTACTCGGAGACTAACAAAATGAATCGTCTGACT
 
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rJMSF028A01+          GCTGTAATTTCTTTCCTTCTTCTATTGACTTAAGCACAGGACCCCGCAGAGCTTTACATA
rJMSF044M22+          GCTGTAATTTCTTTCCTTCTTCTATTGACTTAAGCACAGGACCCCGCAGAGCTTTACATA
                      ____________________________________________________________
consensus             GCTGTAATTTCTTTCCTTCTTCTATTGACTTAAGCACAGGACCCCGCAGAGCTTTACATA
 
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rJMSF028A01+          TATGAGCTCTAATGGTGACTTTTAAAAAGCCATAAAGCTAAAAACTTTCCTTAGGATTTT
rJMSF044M22+          TATGAGCTCTAATGGTGACTTTTAAAAAGCCATAAAGCTAAAAACTTTCCTTAGGATTTT
                      ____________________________________________________________
consensus             TATGAGCTCTAATGGTGACTTTTAAAAAGCCATAAAGCTAAAAACTTTCCTTAGGATTTT
 
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rJMSF028A01+          TAGGTTATACAGTGA                                             
rJMSF044M22+          TAGGTTATACAGTGAGCTGGTTGATGTACATCCTGCTATTATCAAATGTATGCTATGCTA
                      ____________________________________________________________
consensus             TAGGTTATACAGTGAGCTGGTTGATGTACATCCTGCTATTATCAAATGTATGCTATGCTA