Contig 008628:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042K05Sequence699013560 (2)ref|XP_004245777.1|232PREDICTED: uncharacterized protein LOC101258981 [Solanum lycopersicum]797008628 (2)emb|CBI38141.3|4e-39unnamed protein product [Vitis vinifera]
JMSF049L08Sequence446013560 (2)728008628 (2)emb|CBI37359.3|5e-93unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMSF049L08+                                               AGGTTGGCCTTGTTTCACAAGGC
                      ____________________________________________________________
consensus                                                  AGGTTGGCCTTGTTTCACAAGGC
 
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rJMSF049L08+          TGCTTACAATGTTGCTGGCCATGTAGTAAGTGCAAATGCCATTGAACAGTCAATCTTTTG
                      ____________________________________________________________
consensus             TGCTTACAATGTTGCTGGCCATGTAGTAAGTGCAAATGCCATTGAACAGTCAATCTTTTG
 
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rJMSF049L08+          CCTGCGGACTCCACGGATAGGACGGTGGCTGGAGGCTATCCTTTCAACTGCTATTAGGAA
                      ____________________________________________________________
consensus             CCTGCGGACTCCACGGATAGGACGGTGGCTGGAGGCTATCCTTTCAACTGCTATTAGGAA
 
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rJMSF049L08+          AAAATCGGGAGAAGAAAGAGAACGCATCAGCTCGAAACTTGGCCTCAAAAAACCCCAACC
                      ____________________________________________________________
consensus             AAAATCGGGAGAAGAAAGAGAACGCATCAGCTCGAAACTTGGCCTCAAAAAACCCCAACC
 
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rJMSF049L08+          CGTCGTTTGCTTTGCGCTTTGCACAGGAGCTTTTTCTGATCCTATGCTAAAAGTATACAC
rJMSF042K05+                                                     ATGCTAAAAGTATACAC
                      ____________________________________________________________
consensus             CGTCGTTTGCTTTGCGCTTTGCACAGGAGCTTTTTCTGATCCTATGCTAAAAGTATACAC
 
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rJMSF049L08+          GGCATCAAAAGTTGAAGAGGAGCTAGAAAGCGCGAAAAGGGAGTTTCTCCAGGCAAACAT
rJMSF042K05+          GGCATCAAAAGTTGAAGAGGAGCTAGAAAGCGCGAAAAGGGAGTTTCTCCAGGCAAACAT
                      ____________________________________________________________
consensus             GGCATCAAAAGTTGAAGAGGAGCTAGAAAGCGCGAAAAGGGAGTTTCTCCAGGCAAACAT
 
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rJMSF049L08+          AGTTATAAAGAAGTTGAGGAAAGTGGTGTTACCAAAGGTGGTTGAGAGATATGCAAAGGA
rJMSF042K05+          AGTTATAAAGAAGTTGAGGAAAGTGGTGTTACCAAAGGTGGTTGAGAGATATGCAAAGGA
                      ____________________________________________________________
consensus             AGTTATAAAGAAGTTGAGGAAAGTGGTGTTACCAAAGGTGGTTGAGAGATATGCAAAGGA
 
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rJMSF049L08+          AGCTTGCATTCCCTCCGATGATCTTTTGAAATGGGTCGTGGAGAACGTGGACAAGAAGCT
rJMSF042K05+          AGCTTGCATTCCCTCCGATGATCTTTTGAAATGGGTCGTGGAGAACGTGGACAAGAAGCT
                      ____________________________________________________________
consensus             AGCTTGCATTCCCTCCGATGATCTTTTGAAATGGGTCGTGGAGAACGTGGACAAGAAGCT
 
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rJMSF049L08+          TCACGACTCGATACAGAAATGCGTGGAGAGCAGAAGCAGCAAGAAGGCTTCTCAGATTGT
rJMSF042K05+          TCACGACTCGATACAGAAATGCGTGGAGAGCAGAAGCAGCAAGAAGGCTTCTCAGATTGT
                      ____________________________________________________________
consensus             TCACGACTCGATACAGAAATGCGTGGAGAGCAGAAGCAGCAAGAAGGCTTCTCAGATTGT
 
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rJMSF049L08+          CGAATGGTCCGCTTACAGTTCCAGATTCCAGTATGTGATCTCAAAAGATTTAGCAGAGAA
rJMSF042K05+          CGAATGGTCCGCTTACAGTTCCAGATTCCAGTATGTGATCTCAAAAGATTTAGCAGAGAA
                      ____________________________________________________________
consensus             CGAATGGTCCGCTTACAGTTCCAGATTCCAGTATGTGATCTCAAAAGATTTAGCAGAGAA
 
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rJMSF049L08+          ACCATGGTGGACGTAGTTTTAATGAAAGAATGTAGAGTGGCATATCTAATCTGATAAAGA
rJMSF042K05+          ACCATGGTGGACGTAGTTTTAATGAAAGAATGTAGAGTGGCATATCTAATCTGATAAAGA
                      ____________________________________________________________
consensus             ACCATGGTGGACGTAGTTTTAATGAAAGAATGTAGAGTGGCATATCTAATCTGATAAAGA
 
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rJMSF049L08+          TATTCCACAAGAACTTGATGTTCATTCTTCTGATGCAACACCCATCTTGTCCTTGTAAAT
rJMSF042K05+          TATTCCACAAGAACTTGATGTTCATTCTTCTGATGCAACACCCATCTTGTCCTTGTAAAT
                      ____________________________________________________________
consensus             TATTCCACAAGAACTTGATGTTCATTCTTCTGATGCAACACCCATCTTGTCCTTGTAAAT
 
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rJMSF049L08+          TGACTTCTTTCTCATTGAACATTGCTGATTCATGTAAAATTTTGG               
rJMSF042K05+          TGACTTCTTTCTCATTGAACATTGCTGATTCATGTAAAATTTTGGGATTTCACCAATCTG
                      ____________________________________________________________
consensus             TGACTTCTTTCTCATTGAACATTGCTGATTCATGTAAAATTTTGGGATTTCACCAATCTG
 
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rJMSF042K05+          GTCCTCGACTTCCAAAATTCCTCAATTTAGTTCCCGGTTATACTTATTTTTACCTGTAAT
                      ____________________________________________________________
consensus             GTCCTCGACTTCCAAAATTCCTCAATTTAGTTCCCGGTTATACTTATTTTTACCTGTAAT
 
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rJMSF042K05+          GGTCTCAACCGTTAGATATCCGTTAACTTGGGATCAAATTAGTATTCTGATCATTTCAGT
                      ____________________________________________________________
consensus             GGTCTCAACCGTTAGATATCCGTTAACTTGGGATCAAATTAGTATTCTGATCATTTCAGT
 
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rJMSF042K05+          AATTAATTTTCAGAGAAAATGATGCATGTGATGACCGAAATGGTCCCTTGACTATAGCAA
                      ____________________________________________________________
consensus             AATTAATTTTCAGAGAAAATGATGCATGTGATGACCGAAATGGTCCCTTGACTATAGCAA
 
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rJMSF042K05+          AATTATCAATTTGGTCCCGAGTTAACAGATGTCTAACGGTTAGGACCATTTCGAATAAAA
                      ____________________________________________________________
consensus             AATTATCAATTTGGTCCCGAGTTAACAGATGTCTAACGGTTAGGACCATTTCGAATAAAA
 
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rJMSF042K05+          AAGGCATAGTCAGGGACTAAATTGAAAAATTTTGAAAGTCGTAAACCAGATTGGTGAAAT
                      ____________________________________________________________
consensus             AAGGCATAGTCAGGGACTAAATTGAAAAATTTTGAAAGTCGTAAACCAGATTGGTGAAAT