Contig 008627:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN039N20Sequence636008627 (3)ref|XP_006344872.1|132PREDICTED: uncharacterized protein LOC102589747 [Solanum tuberosum]
JMSF042J06Sequence779008627 (3)ref|XP_006344872.1|157PREDICTED: uncharacterized protein LOC102589747 [Solanum tuberosum]762008627 (3)ref|XP_006344872.1|160PREDICTED: uncharacterized protein LOC102589747 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF042J06+            TTACATCTCAACACCAGAAGCTAACATGAAGCTTAATTACAAGGGAAGGCCTGGAATCC
JMFN039N20+                                    CATGAAGCTTAATTACAAGGGAAGGCCTGGAATCC
rJMSF042J06-                                   CATGAAGCTTAATTACAAGGGAAGGCCTGGAATCC
                      ____________________________________________________________
consensus              TTACATCTCAACACCAGAAGCTAACATGAAGCTTAATTACAAGGGAAGGCCTGGAATCC
 
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JMSF042J06+           ATCACCGGATATTAGGCACCGAACAAAAACAAACCCGAGAGTACCAAGTGCTAAGCAGGT
JMFN039N20+           ATCACCGGATATTAGGCACCGAACAAAAACAAACCCGAGAGTACCAAGTGCTAAGCAGGT
rJMSF042J06-          ATCACCGGATATTAGGCACCGAACAAAAACAAACCCGAGAGTACCAAGTGCTAAGCAGGT
                      ____________________________________________________________
consensus             ATCACCGGATATTAGGCACCGAACAAAAACAAACCCGAGAGTACCAAGTGCTAAGCAGGT
 
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JMSF042J06+           GGTGCTTNTACTAGTTTTCCCTACACGCTGGGGATTTCAGCCTAGAAAGTAAAAACTACA
JMFN039N20+           GGTGCTTCTACTAGTTTTCCCTACACGCTGGGGATTTCAGCCTAGAAAGTAAAAACTACA
rJMSF042J06-          GGTGCTTCTACTAGTTTTCCCTACACGCTGGGGATTTCAGCCTAGAAAGTAAAAACTACA
                      ____________________________________________________________
consensus             GGTGCTTCTACTAGTTTTCCCTACACGCTGGGGATTTCAGCCTAGAAAGTAAAAACTACA
 
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JMSF042J06+           GACCTTGTGCTCTCGAATGTGTGTGCATTGGTCCATCAATCTTGCCCATTCACGAAGGAG
JMFN039N20+           GACCTTGTGCTCTCGAATGTGTGTGCATTGGTCCATCAATCTTGCCCATTCACGAAGGAG
rJMSF042J06-          GACCTTGTGCTCTCGAATGTGTGTGCATTGGTCCATCAATCTTGCCCATTCACGAAGGAG
                      ____________________________________________________________
consensus             GACCTTGTGCTCTCGAATGTGTGTGCATTGGTCCATCAATCTTGCCCATTCACGAAGGAG
 
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JMSF042J06+           GTGAGTTCCCGCTTGCTTTTGTTTGGATGCACTTCATTCTTGCTTGATTCCTGAAAATCC
JMFN039N20+           GTGAGTTCCCGCTTGCTTTTGTTTGGATGCACTTCATTCTTGCTTGATTCCTGAAAATCC
rJMSF042J06-          GTGAGTTCCCGCTTGCTTTTGTTTGGATGCACTTCATTCTTGCTTGATTCCTGAAAATCC
                      ____________________________________________________________
consensus             GTGAGTTCCCGCTTGCTTTTGTTTGGATGCACTTCATTCTTGCTTGATTCCTGAAAATCC
 
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JMSF042J06+           TCATTGAAGATATCATTGATGTTATGTTTCTTCAACATGTTACCGCTTCCAAGCGTCGCA
JMFN039N20+           TCATTGAAGATATCATTGATGTTATGTTTCTTCAACATGTTACCGCTTCCAAGCGTCGCA
rJMSF042J06-          TCATTGAAGATATCATTGATGTTATGTTTCTTCAACATGTTACCGCTTCCAAGCGTCGCA
                      ____________________________________________________________
consensus             TCATTGAAGATATCATTGATGTTATGTTTCTTCAACATGTTACCGCTTCCAAGCGTCGCA
 
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JMSF042J06+           CTAGAGGCAGCCTTGTCCATCTTTCTTGTGTTCGCTTCATTCTCAACCTTCTTAAGGGCT
JMFN039N20+           CTAGAGGCAGCCTTGTCCATCTTTCTTGTGTTCGCTTCATTCTCAACCTTCTTAAGGGCT
rJMSF042J06-          CTAGAGGCAGCCTTGTCCATCTTTCTTGTGTTCGCTTCATTCTCAACCTTCTTAAGGGCT
                      ____________________________________________________________
consensus             CTAGAGGCAGCCTTGTCCATCTTTCTTGTGTTCGCTTCATTCTCAACCTTCTTAAGGGCT
 
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JMSF042J06+           TCCCTTTTCTTTTCTTCTAGGTCAACAATCGGCGCATATNGAAACTTCCGTTTGGGAGAC
JMFN039N20+           TCCCTTTTCTTTTCTTCTAGGTCAACAATCGGCGCATATCGAAACTTCCGTTTGGGAGAC
rJMSF042J06-          TCCCTTTTCTTTTCTTCTAGGTCAACAATCGGCGCATATCGAAACTTCCGTTTGGGAGAC
                      ____________________________________________________________
consensus             TCCCTTTTCTTTTCTTCTAGGTCAACAATCGGCGCATATCGAAACTTCCGTTTGGGAGAC
 
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JMSF042J06+           ATTTGAGGCTGGGCGGAGTCGCCGGAGGCGGCGGAGGGAAGAGGAATCCAGCGGCAGAGG
JMFN039N20+           ATTTGAGGCTGGGCGGAGTCGCCGGAGGCGGCGGAGGGAAGAGGAATCCAGCGGCAGAGG
rJMSF042J06-          ATTTGAGGCTGGGCGGAGTCGCCGGAGGCGGCGGAGGGAAGAGGAATCCAGCGGCAGAGG
                      ____________________________________________________________
consensus             ATTTGAGGCTGGGCGGAGTCGCCGGAGGCGGCGGAGGGAAGAGGAATCCAGCGGCAGAGG
 
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JMSF042J06+           AGAAGCGTGGGAGCAGCGGCGTTGTTAGCGTTGGTAGTGTTGCGATGCGTACTCGGCTGA
JMFN039N20+           AGAAGCGTGGGAGCAGCGGCGTTGTTAGCGTTGGTAGTGTTGCGATGCGTACTCGGCTGA
rJMSF042J06-          AGAAGCGTGGGAGCAGCGGCGTTGTTAGCGTTGGTAGTGTTGCGATGCGTACTCGGCTGA
                      ____________________________________________________________
consensus             AGAAGCGTGGGAGCAGCGGCGTTGTTAGCGTTGGTAGTGTTGCGATGCGTACTCGGCTGA
 
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JMSF042J06+           GTTACCACCCACTGCTTCTTCCACTTCCTGACGGGGCCGCTGAACACCGCCGGCGTCGGC
JMFN039N20+           GTTACCACCCACTGCTTCTTCCACTTCCTGACGGGGCCGCTGAACACCGCCGGCGTCGGC
rJMSF042J06-          GTTACCACCCACTGCTTCTTCCACTTCCTGACGGGGCCGCTGAACACCGCCGGCGTCGGC
                      ____________________________________________________________
consensus             GTTACCACCCACTGCTTCTTCCACTTCCTGACGGGGCCGCTGAACACCGCCGGCGTCGGC
 
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JMSF042J06+           GCTGAGCCGTACCGGGATGAAGCCCGACCGAATCTCGACCCGACTCCCTCCATCTCTCTC
JMFN039N20+           G                                                           
rJMSF042J06-          GCTGAGCCGTACCGGGATGAAGCCCGACCGAATCTCGACCCGACTCCCTCCATCTCTCTC
                      ____________________________________________________________
consensus             GCTGAGCCGTACCGGGATGAAGCCCGACCGAATCTCGACCCGACTCCCTCCATCTCTCTC
 
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JMSF042J06+           TCTCTCTCTCTCTCTCTCTCACGATGCGTGAAAGCTCGGGACCCGCATCGTGAAAGCTCC
rJMSF042J06-          TCTCTCTCTCTCTCTCTCTCACGATGCGTGAAAGCTCGGGACCCGCATCGTGAAAGCTCC
                      ____________________________________________________________
consensus             TCTCTCTCTCTCTCTCTCTCACGATGCGTGAAAGCTCGGGACCCGCATCGTGAAAGCTCC